Ec-00_001500.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001500.1
Unique NameEc-00_001500.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length386
Homology
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: A0A6H5JWN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN8_9PHAE)

HSP 1 Score: 529 bits (1363), Expect = 1.040e-181
Identity = 356/481 (74.01%), Postives = 367/481 (76.30%), Query Frame = 1 
Query:    1 STGKGVAKKGWGQLGRASSSNELISRR--EEKTWLPHRTWPSRPTGLPFSERLYSSAPGSFRHGHLGREGEDFRPRVFRGLHRRAVLVGRQPLHLHMLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRRDAALAAADASAVXXXXXSGLTFESFSAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAEDAAPVKRGLVKGAAFGMEPAKKAGGDAEEKGLFDGIAEGMDGEG 1437
            STGKGVAKKGWGQLGRASSSNEL+SRR  E           +  T L  +  L  SA G+F  G    +G+      F G      L         MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSS KLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSL+VVCGLLAIG IASVISNKRRDAALAAADASAV     SGLTFESFSAE      XXXXXXXXXXXXXXXXXXX                                      XXXXXXXXXXXXXXX        ALAE AAPVKRGLVKGAAFGMEPA+K GGDAE++G  DG+AEGMDGEG
Sbjct:   93 STGKGVAKKGWGQLGRASSSNELVSRRGGENVASSADVAKQAYRTALLRTALLVCSA-GAFGMGTWVVKGKTSALEFFAGYIVEQSLSVDNLFIFIMLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSLKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLSVVCGLLAIGVIASVISNKRRDAALAAADASAVTGGGSSGLTFESFSAENDGREGXXXXXXXXXXXXXXXXXXXGGEESTPPAVSAMQLAGVQDKAIAASKAADAAVATAGDXXXXXXXXXXXXXXX--------ALAEGAAPVKRGLVKGAAFGMEPARKVGGDAEKQGFSDGVAEGMDGEG 564
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: D8LEA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA4_ECTSI)

HSP 1 Score: 520 bits (1339), Expect = 7.810e-181
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRRDAALAAADASAVXXXXXSGLTFESFSAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAEDAAPVKRGLVKGAAFGMEPAKKAGGDAEEKGLFDGIAEGMDGEG 1437
            MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRRDAALAAADASAVXXXXXSGLTFESFSAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAEDAAPVKRGLVKGAAFGMEPAKKAGGDAEEKGLFDGIAEGMDGEG
Sbjct:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRRDAALAAADASAVXXXXXSGLTFESFSAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAEDAAPVKRGLVKGAAFGMEPAKKAGGDAEEKGLFDGIAEGMDGEG 385
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA)

HSP 1 Score: 299 bits (766), Expect = 8.380e-96
Identity = 158/223 (70.85%), Postives = 187/223 (83.86%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRR 951
            MLF+YFKVPA +Q RVL WGIIGAVSMRA+MIVVGVAAIQRFRGV+L FA IL+ SS KLL E  +ED      L  N+VLR++ + + STD Y+GEKFFT+VDG K ATPLLLCL+CIE++DFVFAVDSIPAVL +S+DTFIVY+SNVFAI A+RS+YTLVSHAI+DLPYLKP+VALVLGFVG KM AE+FHYEIG+G SL+VV  LL+ G  AS+  N+RR
Sbjct:   44 MLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDED----GDLSNNIVLRISKFFVRSTDKYEGEKFFTVVDGKKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWDNRRR 262
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK)

HSP 1 Score: 281 bits (720), Expect = 3.250e-87
Identity = 144/222 (64.86%), Postives = 182/222 (81.98%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKR 948
            MLFDYFKVP +FQSRVL WGIIGA+SMR +MIV+GVAAIQ+FR V L+FAGIL+ S +K++ E  EE+      LE N++++++N M+ ST  YDGEKFFT +DG K ATPLL+CLICIE++DFVFAVDSIPAV+ +++D FIVY+SN+FAI A+RS+YTLV+ A+ DLPYLKPAVALVLGFVG KM AE+FHYE+G+G SL VV  LL  G +ASVI+  +
Sbjct:  150 MLFDYFKVPMQFQSRVLTWGIIGAMSMRLVMIVLGVAAIQKFRSVTLLFAGILIFSGYKMINESEEEED-----LEDNVIMKLSNKMVKSTTQYDGEKFFTKIDGVKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAKNK 366
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: A0A7S1UHU3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHU3_9STRA)

HSP 1 Score: 268 bits (686), Expect = 4.690e-83
Identity = 140/236 (59.32%), Postives = 183/236 (77.54%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEG--VEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRRDAALAAADASA 984
            +LFDYFKVPA FQSRVLNWGIIGA++MR +MIV+GVAAIQRFR VML+FAG+L+V++ +L+ E   VEE+  D   L  N ++ V+  M+++ DYYD EKFFT+ +G ++ATPLLLCL+CIE++DFVFAVDSIPAVL +S+D FIVY SN+FAI A+RS+Y LV+ AI D+PYLKPAV LVLGFVG KM  E++HYE+    SL V+ G+L    + S+I   ++  A  AA A+A
Sbjct:   84 LLFDYFKVPAAFQSRVLNWGIIGAIAMRGVMIVLGVAAIQRFRVVMLLFAGLLLVAAGRLVKESFAVEEEEED---LSSNWIMNVSRKMVNAVDYYDDEKFFTMSNGIQRATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDPFIVYTSNIFAIAALRSLYVLVAKAIDDMPYLKPAVGLVLGFVGCKMLGEYYHYEVSTAVSLAVIMGILGGSIVLSLIFPPKKVEAAKAASAAA 316
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA)

HSP 1 Score: 267 bits (682), Expect = 6.430e-82
Identity = 138/227 (60.79%), Postives = 178/227 (78.41%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRRDAAL 963
            MLFDYFKVP  +Q+R L WGIIGA+SMR +MI++GVAAIQ+FR V+L+FAGIL+ SS+KL  E  EE   D   L  N++L+++N M  S D+YDGEKFFT V+G + ATPLL+CL+CIE++DFVFAVDSIPAV+ +++D FIVY+SN+FAI A+RS+Y LV+ A++DLPYL+PAVALVL FVG KM AEFFHYE+    SL VV  +L  G   SV+ NK + AA+
Sbjct:  136 MLFDYFKVPLAYQNRCLTWGIIGAMSMRLVMILLGVAAIQKFRVVILLFAGILLASSWKLFFE--EEGDED---LSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRHATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVVHNKAKAAAV 357
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: A0A7S2SRH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRH4_9STRA)

HSP 1 Score: 254 bits (650), Expect = 4.560e-78
Identity = 135/222 (60.81%), Postives = 169/222 (76.13%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKR 948
            +LFDYFKVP   Q + L WGIIGAV MRAIMIV GVAAI+ FR V+LVFAGIL+ S+ KL  E   E+      L  N V+R+A  +  S DY+DG  FFT+V+G ++ATPLLLC++CIE++DFVFAVDSIPAVL+IS+D  IV +SN+FAI A+RS+YTLV+ A++DLPYL+PAVAL+LGFVG KM  E+FH EI  G SL+VV  LL+ G   S+IS KR
Sbjct:   71 LLFDYFKVPLALQPKALQWGIIGAVVMRAIMIVFGVAAIKHFRPVILVFAGILMASAVKLFFENEAEED-----LSENAVMRIAKSLCPSVDYFDGSNFFTMVNGVRRATPLLLCVVCIELSDFVFAVDSIPAVLSISKDQLIVLSSNIFAIMALRSLYTLVARAVNDLPYLRPAVALILGFVGTKMALEYFHVEISTGLSLSVVAALLSGGIGLSLISQKR 287
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN)

HSP 1 Score: 255 bits (652), Expect = 5.020e-78
Identity = 129/223 (57.85%), Postives = 173/223 (77.58%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRR 951
            MLF+YF+VP  FQ RVL+WGI+GA+ MR +MIV GVAA++RFR   L+FAGIL++SS KLLMEG E++         N+V+R++  ++ +T  YDG++FFT+VDGAK+ATPLLLCL+C+E++D VFAVDSIPAVL IS D F+VY+SNVFAI  +R++Y LV+ A+  + YLKPAV  VL F+  KM  E+FHY IG G SL VV  LLA+GA AS++++KR+
Sbjct:   63 MLFEYFRVPPAFQQRVLSWGIVGAILMRGVMIVAGVAAVKRFRWTSLLFAGILLLSSVKLLMEGDEDEDVGD-----NLVMRLSRKLVGATTEYDGDRFFTVVDGAKRATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASLLASKRK 280
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.550e-77
Identity = 131/223 (58.74%), Postives = 170/223 (76.23%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRR 951
            MLF+YF+VP  +Q RVL WGIIGAV MR IMIV GVAA+Q+FR V+L+FA IL++S+ KL  E  E +      L  N V+R++ + + + + YDG+KFFT++DG ++ATPLLLCL+CIE++DFVFAVDSIPAV+ +SQD  IVY+SN+FAI  +RS+YTLV+ A+ DLPYL+PAVALVL F+G KM  EFFHYEI +  SL VV  LLA G + S+I  K R
Sbjct:   66 MLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFESDEPED-----LSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHKKPR 283
[Close]
BLAST of Ec-00_001500.1 vs. uniprot
Match: W7THX1_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THX1_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.010e-72
Identity = 134/231 (58.01%), Postives = 172/231 (74.46%), Query Frame = 1 
Query:  283 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLME----GVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNK---RRD 954
            MLF+YFKVP E+QSR L+WGI+GAV+MR IMI VGVAAIQRFR V+L+FAG+L+ S+FKLL E    G EED      L  N+++  A  ++ + D YDG+ FFT  +G + ATPL +CLICIE++DFVFAVDSIPAVL +S+D  IVY+SN+FAI A+RS+YTLV+ A++ L Y+KP+VALVL FVGGKM AEFFH E+ +  SL VV  LL  G   S++  +   RRD
Sbjct:  158 MLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEED------LSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQRVLARRD 382
The following BLAST results are available for this feature:
BLAST of Ec-00_001500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWN8_9PHAE1.040e-18174.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEA4_ECTSI7.810e-181100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZA94_9STRA8.380e-9670.85Integral membrane protein TerC family-domain-conta... [more]
A0A7S3XZU5_HETAK3.250e-8764.86Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S1UHU3_9STRA4.690e-8359.32Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2Y1S8_9STRA6.430e-8260.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SRH4_9STRA4.560e-7860.81Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0Y6P3_AURAN5.020e-7857.85Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2RH37_9STRA1.550e-7758.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7THX1_9STRA1.010e-7258.01Integral membrane protein TerC n=3 Tax=Monodopsida... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1712105..1721450 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score520.4
Seed ortholog evalue7.2e-145
Seed eggNOG ortholog2880.D8LEA4
Length1443
Hectar predicted targeting categoryother localisation
Gene idEc-00_001500.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007275,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009791,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0055035,GO:0061024,GO:0071840,GO:0090351
EggNOG free text desc.membrane protein TERC
EggNOG OGs2QQNF@2759,COG0861@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001500Ec-00_001500Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1712105..1721450 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001500.1Ec-00_001500.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1712105..1715884 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001500.1.8Ec-00_001500.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1712105..1712650 -
Ec-00_001500.1.7Ec-00_001500.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1713085..1713252 -
Ec-00_001500.1.6Ec-00_001500.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1714017..1714154 -
Ec-00_001500.1.5Ec-00_001500.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1714777..1714954 -
Ec-00_001500.1.4Ec-00_001500.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1715302..1715390 -
Ec-00_001500.1.3Ec-00_001500.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1715846..1716000 -
Ec-00_001500.1.2Ec-00_001500.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1716855..1716941 -
Ec-00_001500.1.1Ec-00_001500.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1721369..1721450 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001500.1CDS:Ec-00_001500.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1712105..1712650 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0015005UTR:Ec-00_001500.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1715885..1716000 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001500.1 ID=Ec-00_001500.1|Name=Ec-00_001500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=386bp
MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFA
GILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFF
TLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVF
AICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGT
SLTVVCGLLAIGAIASVISNKRRDAALAAADASAVTGGGSSGLTFESFSA
EKDGGEGGGAGGGGGGFASDAAAAFTSEAGGEESTPPAVSASAVDEELAG
VQDEAIAASKAAEDAAAAKAGDAADDAAAAAEAAGAAALAEDAAPVKRGL
VKGAAFGMEPAKKAGGDAEEKGLFDGIAEGMDGEG*
back to top

spliced messenger RNA

>Ec-00_001500.1 ID=Ec-00_001500.1|Name=Ec-00_001500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1443bp|location=Sequence derived from alignment at chr_00:1712105..1721450- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGTACTGGAAAGGGGGTCGCGAAGAAGGGGTGGGGGCAACTAGGACGAGC
CTCGTCATCAAACGAGCTCATTAGTCGGCGAGGAGGAGAAAACGTGGCTT
CCCCACCGGACTTGGCCAAGCAGGCCTACCGGACTGCCCTTCTCAGAACG
GCTCTACTCGTCTGCTCCGCGGGAGCTTTCGGCATGGGCACTTGGGTCGT
GAAGGGGAAGACTTCCGCCCTCGAGTTTTTCGCGGGCTACATCGTCGAGC
AGTCCTTGTCGGTAGACAACCTCTTCATCTTCATCATGCTGTTCGACTAC
TTTAAGGTCCCTGCGGAGTTCCAGTCGCGCGTGTTGAACTGGGGAATCAT
CGGAGCCGTGTCGATGCGGGCGATCATGATCGTCGTTGGCGTGGCTGCGA
TACAGCGATTCCGGGGTGTCATGCTGGTCTTTGCCGGCATCTTGGTGGTT
TCTTCCTTCAAGCTTCTGATGGAAGGGGTTGAAGAGGACCACGCGGATAG
CTCTGCTCTCGAAGGCAACATGGTGCTTCGAGTCGCGAACTGGATGATGG
ACTCGACCGACTACTACGATGGGGAGAAGTTCTTTACACTGGTGGACGGC
GCCAAGAAGGCCACGCCTCTTCTCCTGTGCCTGATCTGCATCGAGATGAC
AGACTTCGTCTTTGCGGTGGATTCTATCCCGGCCGTCCTTGCCATCTCTC
AGGACACGTTCATCGTTTACGCGTCCAACGTGTTCGCCATCTGCGCCATG
CGAAGCATCTACACCCTCGTTAGCCACGCCATCTCCGACTTGCCGTACCT
CAAGCCTGCCGTGGCCCTTGTGCTCGGCTTCGTGGGGGGCAAGATGTTCG
CGGAGTTCTTCCACTACGAAATTGGCGTTGGGACCTCGCTGACAGTGGTG
TGCGGCTTGTTGGCCATCGGCGCCATCGCCAGCGTGATCTCGAACAAGCG
GCGAGATGCCGCCCTCGCCGCCGCCGACGCCTCCGCGGTGACCGGCGGCG
GCTCCTCCGGGTTGACGTTCGAATCATTCTCAGCTGAAAAAGACGGCGGG
GAAGGAGGGGGGGCGGGAGGAGGAGGAGGAGGGTTTGCCAGTGACGCAGC
GGCCGCATTTACCTCTGAAGCTGGTGGGGAGGAGAGCACGCCCCCGGCGG
TGTCAGCGTCGGCAGTGGACGAGGAGCTGGCGGGGGTGCAAGACGAAGCG
ATCGCCGCTTCGAAGGCCGCGGAGGACGCGGCAGCAGCCAAGGCGGGGGA
TGCCGCCGACGATGCGGCGGCAGCGGCGGAGGCTGCGGGGGCGGCGGCGT
TGGCCGAGGACGCCGCGCCCGTCAAGAGAGGCCTGGTAAAAGGAGCTGCT
TTTGGGATGGAGCCGGCCAAGAAGGCCGGGGGGGATGCGGAGGAAAAGGG
CCTCTTTGACGGAATTGCAGAGGGCATGGACGGCGAGGGATGA
back to top

protein sequence of Ec-00_001500.1

>Ec-00_001500.1 ID=Ec-00_001500.1|Name=Ec-00_001500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=386bp
MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFA
GILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFF
TLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVF
AICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGT
SLTVVCGLLAIGAIASVISNKRRDAALAAADASAVTGGGSSGLTFESFSA
EKDGGEGGGAGGGGGGFASDAAAAFTSEAGGEESTPPAVSASAVDEELAG
VQDEAIAASKAAEDAAAAKAGDAADDAAAAAEAAGAAALAEDAAPVKRGL
VKGAAFGMEPAKKAGGDAEEKGLFDGIAEGMDGEG*
back to top

mRNA from alignment at chr_00:1712105..1721450-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001500.1 ID=Ec-00_001500.1|Name=Ec-00_001500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9346bp|location=Sequence derived from alignment at chr_00:1712105..1721450- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGTACTGGAAAGGGGGTCGCGAAGAAGGGGTGGGGGCAACTAGGACGAGC
CTCGTCATCAAACGAGCTCATTAGTCGGCGAGGTGTGTCTTTTTGCTGCT
TGCTTTGATTACATTAGCCTGCTGGGTGTACGTGTGTCTCCTCCCTGCAG
TCGCGAACGCTACCGCCCATGTTGTTTGTTGCTTTCTCCCTGCCATGGCG
TCAGGGACAGCAGTGTCGCTGCCCCCCTTCGTCTGCGTAGGTGTTGACGT
GATGCCGTTGTTGGGTTTTTGGCGTCTTGAAGTGTGTGATGATATGCCGA
AATGCTGCAGGAGGCAGGTCATATATATCACCGAACCATCACGAAGAACT
ACAGCAGTAGTTCTACACCAGCCGCCATCATGGCGTTCCTCCTCTGTGCC
GCGCGTGTTCTTGTGGGCCCGAGACTCTTGGAGGTACGTTCACGCTGGAA
CTGGAACAGCAGGCCAATTTTTTATCATCGATACACATGTACATTATATT
TCGCGCAAAATCTCCGAAAAATCAGAGAGGCACGCGGCAACGGCGGTTGA
CGTGTACGACGTGGATTGGATACGTCACATACGCATGCATACATTTGGCC
CGCGTGGGAACATGTCGCTTGATAATTGCTAGGCTATATACGATAACACT
AATACTGCTGTACTGCTGTAAGCTGGGCTTGTCCCCGGATTTTCGGCGGT
CGGTCAGCGGACCGGAGTTTTGCTGCACAAGTTGGGCAGTTTTTTTTCTG
CGTGTCCGCGCGGGGGGCCTTTGCTCGAAGTCGGTGTCAGTGAACCTTTG
GGACTTGTACGGTATTACTGCTGTTGCAATCAGCTACTGCTGTGACGGGA
TATGACACATGCGCCATGTACGTGTTCTTTTTAGTCCAGTCTCCCACGCA
GGTAATGACTACTGCTGTGAATGTCTTCAGCACCCAAGGACTGCTATCCC
GGGTATCTGGTGGATCATCTGTTGCCGAGTTACTGCTACATTGTATGCCG
TATGCATATTTGTTTGAACAAGGGTTTGGTTGTCACCGAGGAGATTGGCT
CGGTATCCTTACGCGGGAGCGTGTGTTCTTTTTGGGGGAGGGTTGCATCA
CCCCCCGCGCGCTAATTGGCAGTCAATCTCAGCAAGTGCGTCTATAAAAG
GGCCAGGTCATGATCTGGGATCTCGCCCGCGGAGGTCATGGGGGAAGCTA
ATCTCTCTACTCTACTCTACTCTATGCATACATAGCTGATGACCTCGCCC
AAGGGGTTTAAAGAAGAAGTGCATGTTCCTCACCTAGGCGTTTCGCATTG
GGTGGTCCCAAGGAACGTGAGGGCTCCTCCGGCAGCTAAGGTAGCCTCGA
CTGGAATTTCTTCGGAGGTCCGGATCCAGGAAACCCTTCTTGATTTTCCT
GGATCCGCACCTGTGAAGAAATCACGGCTGAGGCTGCCTTGGCCGCCTGA
GGAACCCTTACGTTCCTCAGTGCCATCGAATGCGAAACGACCAAGGTGAG
AAACATGCACTTGTTCATTACACCGGACCTGGGTGTCCTTTCTGTGTAGG
CCCTTTCTTTTTTGCATCGACTGACAAGCCCTGCAGTCAATTTTGTCTCA
GTGCGGCTATAAAGGTTCTATAGGCCATGATCTGGGATCTCGCCAGCGAG
GACCATGGGGGAAGCTACTGCTGTAGGATGTCTACTCTACGCGTGTTCTT
TTTGACGCGCGCTTTCCGGGTAGTTTGTTCTGTTTTTTTTGTTTTTTGGC
CAGCTCTGTGTGTCCTTTCGGCGTCTTGTGTGATTATATTTTCTTTGGTC
CCTTCCGCTCGGACACCGTTGTACCCCTTTCGGCAAAGTAATTGATGCAT
CAACGATGCTACAAAGCACGAGGTACTAATAAGTTTTCATTCCTAGAGGA
ATCCAAAGCATGTGAATCATGTAGCTTCCGAGGAATGTAGGCGTCTCGAT
TGGTTGATACCTGCTAGATAGTCGGAGGTGTTTTCTAGGTACATAGTACC
ACCATCTGTCACCACCGAGTTTAAGTAGGTATGAACCACCCCACTCTGTC
CTCTGTGAAACTCGGCTTGTACGTGGGTATGTACCACGCCCCGCTGTCCA
TCTGTGCACCATTGTTTTCATTTCTTGAGGTATCAAGTATCAAGGGCTAT
CATACGGTGCCTTGGAACTCCGTGCCAAAACCGTGTGCAGTAGAGTGTGC
TTCTACTACTACTGTACCTCAACGACCGCGGCGGGAACAAAATATTTTTC
GGAGGTATTGGTACGTAAGAATGTTGTTTCGTTGAAGGACTGACATGTGC
TTGAGAAAACACTCGCCTGTCTCCCAACACAAGGAATTATCGCGACAACG
TCCCATTCTTCATGCATGTGGCCTTGAGGGGACGCATAAAGTCTAACGGT
AGATTTGAGGCTTCTTTCTTGACCTCGTTGTTTTTGACCTGTTTCGGAAC
GAAAACGATCGTCAGTTGTACGCAGGAGTTCAGGGTTCATGCGCTGTCTC
GCAGGTACAACGTCGTTCGAAATGCTCGAAAGCACTACAATACCGCTGTA
TGCATTCTGGCTGTTGAGAAAGATGGCCTCGCCCGAGGGGTGTAAAGAAG
AAACGCGTGTTCCTCGCGTTGGCAGTTTCACAATCGAGGGTGACGAGGAT
GGTGAGCGTTTGTCCGGCGGCCAAGGTAGCCTCGGCGGGGATTTCTTCGG
AGGTGCGGATCCAGGAAACCCTATACTTGATTTTCCTGGATACGTGCCTC
TGAAGGTTTCCCAGCCGAGACTAGCTTGACCGCCGGAGGAACCCTTACGT
TCCTCGTCACCATCGAATGCAAAACGACCAAGGTGAGAAGCATGCGCTTG
TTCTTTAAACCGGGCCCGGATGTCCTTTCTGTTTACGGTAGGCGTGTTTT
TTTCCTTTTGTATCCACCGGGCTACCCTGCAGTCAATTCAGTCTCAGTGC
GGCTATAAAGGTTCTATAGGCCATGATCTGGGATCTCGCCAGCGAGGACC
TTGGGAGAAGCTACTGCTGTAGGGCATATACTCTACGCGTGTTTTTTTTT
GTTTCTCTCTCGGGTTGTTTGTTCGGGGTTTTGAGCGATGTTGGGCAGCT
CTGTGCCCCTTCGGTGACTGTGTCGTCCGACTCGCCATTCGACACCTTTC
GGCAAAACTTGACGCTCATATCTAGTACGATGTTACAAAACACGAAATAC
TAGCATATTTACGTTGCTAGAAGAATGCACAGCCGTTCGAGTTATGTCTG
ATAGCTCTCGAAAGAATGTATTGAAGGCTGTCTCGATTGGTTGATTTGGT
ACTTGCTAGATACATTTAGAGGATTCTTTAGTACCCCTCTGTCCACCTGT
GCACCATTGTTTTCATGTCTTGAGGTATCAAGCATCAAGGGCTGTCATAC
GGTGTCTTGGAAGTCCGTGCAAGAACCGTGCACAATATTCTATTACCTCA
ACGACCGCGGCAGGAACATTGTACAGGATATGTTTTTCGAGGTAGAAAGA
TAGAGAGATGTTTTGTTGAAGGACTGGCATCATTTGCAGATAAAACTCGC
CGGTCTCCCAACGCAAGGAATTTTCGCGACAACGACCACGTCTTCAAGCA
TGTGGCCTTTAGGGAACGCATTAACTCTACCAGTAGATTTGTGGCTTCTT
TCTTGGCCTCGTTGTCTTTGATGTGTTTCGGAACGAAAACAATCGACAAT
TCTACATGTACTTCAGGGCCCATGCGCTGTCTCGCAGGTATAATGGTGTG
TAGCCGTTGAGAAGGATCATCTCGCCCGAGGGGTGTAAATAAGAAGCGCG
TGTTGCTAGCCTTGGAAGTTTCGCATTCAATGTTATTCAATGTTTGCCAG
GATCGCGAGGTCTCCTCCTGCGGCCAAGTGGCTGCAGCCGGGTTTCTTCG
CACGAGCGGATCCATGTGCCAAGAAGGACTCCAAGTAACACTTGTGGTTT
CATGTTTGATCAAATATACAACCACAATTGTTGCCTGCTGTCTTTCTTGG
CACATGGATCCGCTCGTGCGAAGAAACCCGGCTGCAGCAACTTGGCCGCC
GGAGAAACCCTCACGACCCTCGCCACCCTTGAGTGCAAAACTACCAAGGC
GAGAAACACGCGCTTCTTCGTTACACCCCTCAGACGAGGTCATTCTTCTC
AACAGCTATAATTCGTTCCAGTAGCGTTGGAGCATTTAGACCTAGGCTTG
TCGATCGTGTTCGTTCCGAAGCATGTTAGGCCAAGGGAGAAGCGTCAGAT
CTAGATGTTGTGCGTTTCCTGCTGCCCACATGCATGTACGAGAAATTGAT
CGTGATGATTCCCTGTCTCTGGAGACCGGCGATATTTATGTGCAACACAT
GCCAGTCCTTCAACAAAACGCGACTCCAAGAACAACTAAATGCTACACAA
CTTCACGGTCCAAACAGTGATTAGATTCGCCGTCCAACAAAACTTCTTCC
CCACCCTGCGTTGGGACATAACTGCTATTAATACCATGGCGTTTTTCCCC
GCACCACAGGAGGAGAAAACGTGGCTTCCCCACCGGACTTGGCCAAGCAG
GCCTACCGGACTGCCCTTCTCAGAACGGCTCTACTCGTCTGCTCCGGTGA
GCTAAGCGGGGACGAAAGATGCGGACGCCATGCATCCCACTGCTAGTCGA
AAATATGCTTCGTGTTAAAAGTTCAAGCAACGATGGTCCATCGAAAGTGT
GTCAGCTCTGGTTCCGGACATCTTTCTTTGTCGACACCTTGAGGGCAATT
TTTTGGAGCGCTTCTGTGGGCTTGGCCCCACTGCCCCCCGTGCACCTCTA
CAACACTGAACCCCTTTGAAGTTGTACAGTAGTTGCGTTTGGTCGCGTCG
TGTTTGTGTGGTGAGCGCCGACCACGCCGAGAACAACTAGCGAAGGTGCA
CTCAGGATAATTGTTGCTTCCTGATTACCCTCGTTGACCCCTTTTGGGCT
GCCTGTCGGCTATTTTTGGCGAACGTGTTGGTCAGCAGTTGTATGCAAAT
TGAAGCAGCTTGCCGCCATGGCCGTACGTAGCACATGGATGGGAACCGCA
ATCGAAAATGGTCAGGGACAGGAGGGGTACTTTTTTTGTTCTACCCTAAA
ATATCTCGGAGATTGTCTCTTTTCCCCTCTTCGATCGTCGCTGTAACTCC
AATCTTCATTATCAGCCCCCCCCCCCCCCCCACCGCCTCATATCTCTTCT
ATTTAGTACCGTTGATCGTGACTATGACTCTGTTTTAGGGATGAGGCGCC
GTCCCAGCGCTTGGAGACATATCAACATCTGAAAGGCTACCGCAATCAGT
GCTTGCGTATTCATGTCCCCCCTCTCCGCCTCCCTCGTGCCTTGAGCCCC
TTCCAAACATCCTCCTCTCTCAGGTAGACCTCTCCCATGATCCTCCCCCC
CCCAAAAAAACGTTGGTGCTACAATGTACTTCCTATTGCCTTTGTTTCAG
CGGGAGCTTTCGGCATGGGCACTTGGGTCGTGAAGGGGAAGACTTCCGCC
CTCGAGTTTTTCGCGGGCTACATCGTCGAGCAGTCCTTGTCGGTAGACAA
CCTCTTCATCTTCATCATGCTGTTCGACTACTTTAAGGTCCCTGCGGAGT
TCCAGGTGGGCAGTTTTTTTCCAGGGGGGAGGGGGGGGGAGTGTGAAGTG
AGCTGCTCAGTGTGTGATGAGTGAGGCACGGGAAACCAACGGCGATTCCA
GTTGTTTTTGGTCAACCCCTTGTTATTTCATGCCCAACATGCGGCATTTT
AGGTATACATTGGTTGCGTAGTTGAATCGAAAGGATTTAGACTAGCCTCG
AGAAGAGTGATCTGTGCAATACAGCACCTAACCAGTAAGAGAAAGAAGAG
ATTGAGTGGCAGGAGCACGGCAGCAACTGGACTTGAGAAACATGCCTCGA
GCCCTCGCCTATGCCACACTTGAATTTCCGCTGCTTCCGTCTTTGTTCTC
TCGTTCATTCCTTCACTGTCGGTGATGTTGATTGTTCCTTCTGCAAACGG
TGCGCTCCTTCCGTCGGTGATGTGTGAATGGATGTGCGGCGGAACTATCC
ATATGTATAGTCGCGCGTGTTGAACTGGGGAATCATCGGAGCCGTGTCGA
TGCGGGCGATCATGATCGTCGTTGGCGTGGCTGCGATACAGCGATTCCGG
TAAGTGGAACTCATACTTGCAGCCTTTCAAGTCCGGTTTGAGATGCGCTG
TACATCGATTATGAATCGCTTGGTTTGTGTTTTGCTTTGCGTTGAGGGGG
GTCCCGGATTGTTTTCGGAGACCCTCTGTTGTTTTCCCTCTTGACGACTT
TTCATCTCCGTCCCTGGCCTGCACTTTGTCAACGTCCTAACGTCCTAGGC
TTGCCTAGCACTCCTGGGTTGTGCATGTTTTTCTCTGGTTCATTACATAG
TGTCAGTCGCACAAAGGACAAGATGCCCACCGAACCCATCTCGTCTTTTC
GCGCGTCATGATATTTGTTTGTTTCTGTCCGCCGACGTTTCATCAGGGGT
GTCATGCTGGTCTTTGCCGGCATCTTGGTGGTTTCTTCCTTCAAGCTTCT
GATGGAAGGGGTTGAAGAGGACCACGCGGATAGCTCTGCTCTCGAAGGCA
ACATGGTGCTTCGAGTCGCGAACTGGATGATGGACTCGACCGACTACTAC
GATGGGGAGAAGTTCTTTACACTGGTGAGGGCTGACGTTACCACCTGTCA
GACCGGTTTTGAATGCTTGTGCTCCTGCAGCTATTGCCCTTAGCATTGGT
AGTGTTGATATATGAAGTAGTGCACACATCATGCACTCTCCTCCGAAGGT
GTGATGCTTGACATGTCGTGTTTGATAGATGTACGATGTTGCTCTTGTAC
GCACCACCCAAACACTTTGCAGCATCGCACATGGGGAAAAGTCAAGGCCC
GTCATCCCCACAAGATCGTCGGTGTGGTTCCACGTTGCTTTGCGTTGCGG
ACGCCCGGTGTGATTCGTTTCTCGCAACTTCCGTGATTTTTTTTATTCCG
TTCTCCGACGCGTGCAGACGTCCACGTCTTGAGGAACTGGATTTTTTCTT
GTTTTATTTGCCTTTTCCTTGAGCAGGGCTGCTCGACTGGTGGTGTGGTA
TTAGGAATGCATGCCTTCAAGTACAGTTGTGCTGGTGTAGGACGACACAG
GCCAACATCCCGTGGCCTTGACGGATGACATGCTCGCTTCAAGCACCTCG
TTGGAAATGGCTGGCCTCCAATGGTAGCCTGTCCCTCCCATCTCTCTGAC
GGTAACATTCGTGTTGCTCGCGATTTCGGCTTGGACGTTTTTGCAGGTGG
ACGGCGCCAAGAAGGCCACGCCTCTTCTCCTGTGCCTGATCTGCATCGAG
ATGACAGACTTCGTCTTTGCGGTGGATTCTATCCCGGCCGTCCTTGCCAT
CTCTCAGGACACGTTCATCGTTTACGCGTCCAACGTGGGTGTTTTGGTCG
TGCTTGATTCGCGAGATTGGTGTTGTGAGGTTGTGTTTGGCGCTTACGCT
CCGTTGGTGTTGGTGCTGAATTTACCTCATTCGTTTTTGGTTTATTGCGG
GGTGTTTGCTTTCGAACACGTCTAATCAGTTTCGTCGATTTGTGCGCCCT
TTGGTAAACAGCTGCATACCGAAGGGCGATGCAGTTGTGTTGTGATGGGA
ACAGGCGAATCTCACCCATTTCTGGGAGTTCTATTCTCGTTTTTGTACGC
TTCCCCCCTCCCCTCCATCCCTTCCCTCGTTCACGCGTTGTTCTGATTTT
GCTCATTGCTCTATCGGTGCTTTACGTAAGAGGTTTTTCTGCTTCATATC
TCGGCCGAAAAAATCTAAAATATTAGCGTCAGAACCGAATTATCTCGCAC
ATTCTCCTTACTTGTTGTCGGATTTCGAAATGTTCCGAATTTGAAGAGGT
ATCCCCCCACGGTTGTCTGTAGTCACTGAAGTGACATGCTGCACACCTTT
TGTAACACTTTTGTACGCGTGATTTCCACAAAGGGCGCGTCGATGTAGAT
GACGCCCCGTTGTCTGCATCGCTGGAATGGCCTACCGCACGCCTCTGTAC
TGTACGCTTGATTTTCACGAGTGAAGGGCGGCTCGACGTCGTTCACTCAA
CGCCCCCCCACTCGCACCTCCAGGTTGTAAGAGTTGTGTCCACGAGTCAC
ACGTCCCATCCCGACTTCAATTGTTGACCTGCAACTTCTATGCAACAGGT
GTTCGCCATCTGCGCCATGCGAAGCATCTACACCCTCGTTAGCCACGCCA
TCTCCGACTTGCCGTACCTCAAGCCTGCCGTGGCCCTTGTGCTCGGCTTC
GTGGGGGGCAAGATGTTCGCGGAGTTCTTCCACTACGAAATTGGCGTTGG
GACCTCGCTGACAGTGGTGAGTGATGGTGTTTGTTTTTTTCTCGTTTCCT
TACCCTCCTTCCCCTCATCCTTGACCTTGACCTTGACCTTGACGTGCGTT
GCTCCTCGGATGCTTTCTGCGTACTACCGTAGTTTGGTTGCTCGTCTGTC
ATAGCGTTCCAATTTCAAGCCTGCCGAGTGCCGAATGGGAGTCAGGCGGG
GGGTTGGGGAACGGGGGAAAAAACGGGGCTCAATTAATTTATTGTTTTGA
AGCCGAATGCGTTGCTGTTTTTTTAAATGCGCGCAAAAAAATATAGGCGC
CCTTCTCATTTGTATAGATATGTTGGTATGGGCGCTGTAGCTGATCCAGG
CCCCTTTAATCGCGGTTATTACGCTACTCCAGTGGTCCGTCAAACTGCTT
TTTTTCAATGAAACTCTCGCCTCTCTCCCCTTGGTTGCGCCTTTTTTCAG
GTGTGCGGCTTGTTGGCCATCGGCGCCATCGCCAGCGTGATCTCGAACAA
GCGGCGAGATGCCGCCCTCGCCGCCGCCGACGCCTCCGCGGTGACCGGCG
GCGGCTCCTCCGGGTTGACGTTCGAATCATTCTCAGCTGAAAAAGACGGC
GGGGAAGGAGGGGGGGCGGGAGGAGGAGGAGGAGGGTTTGCCAGTGACGC
AGCGGCCGCATTTACCTCTGAAGCTGGTGGGGAGGAGAGCACGCCCCCGG
CGGTGTCAGCGTCGGCAGTGGACGAGGAGCTGGCGGGGGTGCAAGACGAA
GCGATCGCCGCTTCGAAGGCCGCGGAGGACGCGGCAGCAGCCAAGGCGGG
GGATGCCGCCGACGATGCGGCGGCAGCGGCGGAGGCTGCGGGGGCGGCGG
CGTTGGCCGAGGACGCCGCGCCCGTCAAGAGAGGCCTGGTAAAAGGAGCT
GCTTTTGGGATGGAGCCGGCCAAGAAGGCCGGGGGGGATGCGGAGGAAAA
GGGCCTCTTTGACGGAATTGCAGAGGGCATGGACGGCGAGGGATGA
back to top

Coding sequence (CDS) from alignment at chr_00:1712105..1721450-

>Ec-00_001500.1 ID=Ec-00_001500.1|Name=Ec-00_001500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1158bp|location=Sequence derived from alignment at chr_00:1712105..1721450- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTGTTCGACTACTTTAAGGTCCCTGCGGAGTTCCAGTCGCGCGTGTT
GAACTGGGGAATCATCGGAGCCGTGTCGATGCGGGCGATCATGATCGTCG
TTGGCGTGGCTGCGATACAGCGATTCCGGGGTGTCATGCTGGTCTTTGCC
GGCATCTTGGTGGTTTCTTCCTTCAAGCTTCTGATGGAAGGGGTTGAAGA
GGACCACGCGGATAGCTCTGCTCTCGAAGGCAACATGGTGCTTCGAGTCG
CGAACTGGATGATGGACTCGACCGACTACTACGATGGGGAGAAGTTCTTT
ACACTGGTGGACGGCGCCAAGAAGGCCACGCCTCTTCTCCTGTGCCTGAT
CTGCATCGAGATGACAGACTTCGTCTTTGCGGTGGATTCTATCCCGGCCG
TCCTTGCCATCTCTCAGGACACGTTCATCGTTTACGCGTCCAACGTGTTC
GCCATCTGCGCCATGCGAAGCATCTACACCCTCGTTAGCCACGCCATCTC
CGACTTGCCGTACCTCAAGCCTGCCGTGGCCCTTGTGCTCGGCTTCGTGG
GGGGCAAGATGTTCGCGGAGTTCTTCCACTACGAAATTGGCGTTGGGACC
TCGCTGACAGTGGTGTGCGGCTTGTTGGCCATCGGCGCCATCGCCAGCGT
GATCTCGAACAAGCGGCGAGATGCCGCCCTCGCCGCCGCCGACGCCTCCG
CGGTGACCGGCGGCGGCTCCTCCGGGTTGACGTTCGAATCATTCTCAGCT
GAAAAAGACGGCGGGGAAGGAGGGGGGGCGGGAGGAGGAGGAGGAGGGTT
TGCCAGTGACGCAGCGGCCGCATTTACCTCTGAAGCTGGTGGGGAGGAGA
GCACGCCCCCGGCGGTGTCAGCGTCGGCAGTGGACGAGGAGCTGGCGGGG
GTGCAAGACGAAGCGATCGCCGCTTCGAAGGCCGCGGAGGACGCGGCAGC
AGCCAAGGCGGGGGATGCCGCCGACGATGCGGCGGCAGCGGCGGAGGCTG
CGGGGGCGGCGGCGTTGGCCGAGGACGCCGCGCCCGTCAAGAGAGGCCTG
GTAAAAGGAGCTGCTTTTGGGATGGAGCCGGCCAAGAAGGCCGGGGGGGA
TGCGGAGGAAAAGGGCCTCTTTGACGGAATTGCAGAGGGCATGGACGGCG
AGGGATGA
back to top
Synonyms
The feature 'Ec-00_001500.1' has the following synonyms
Synonym
Esi0013_0108
Esi_0013_0108