Ec-00_001040.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001040.1
Unique NameEc-00_001040.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length562
Homology
[Close]
BLAST of Ec-00_001040.1 vs. uniprot
Match: A0A6H5K2E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E8_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 2.680e-126
Identity = 380/647 (58.73%), Postives = 390/647 (60.28%), Query Frame = 2 
Query: 1526 MGGLKLLYRLRARLKRRPQLQLDVKETDHGFAIEKVRKLIFSYQDGGAPALWFPEDANLAAELGHLQLMKTIKGGFRYSV-------------DAMDRAARGGHLDVVKFLCQQGQKCTTXXXXXXXXXXXXXXXVWLHRNTSAGATKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------DIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL 3208
            MGGLKL+YRLRARLKRRPQLQLDVK TDHGFAI+KVRKLIFSYQDGGAPALWFPEDANLAAELGHLQLMKT+KG     +             +  D AA  G+L VV+                           WLH N   G T +    XXXXXXXXXXXXXXXXXX                                                                                        EGVAL+TRGSNTSVTSI SLDSLGLGLDSPTLSI HG GHF F+CSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                   D GATCTSTAVHLAQVHGHHGVYRFLN MYPGKASPFDAFSDPTVVAEQEMVDQDK LDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTF L
Sbjct:    1 MGGLKLIYRLRARLKRRPQLQLDVKATDHGFAIKKVRKLIFSYQDGGAPALWFPEDANLAAELGHLQLMKTMKGVKSGQIFLTSRNLKVSRQRNRPDYAAANGYLPVVQ---------------------------WLHDNRREGCTVSAMNWXXXXXXXXXXXXXXXXXXETYVWYDMTQVDTPYAERTLPDRLFDLLSYRHEGCTTAAFDRAAMNNHVHVIMWLTDNRSEGGTESALQWAMVALLLAPRKDSDS---EGVALQTRGSNTSVTSIKSLDSLGLGLDSPTLSIPHGKGHFRFNCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCDHIDDTPENSSSHPTAACEGCRPTYFIASFSSGGILDPKDNSFGSLPSVPQTDRLAVDSCYRQHPGPHRSPALEGCSREAMERAARNGHLEVVKLLHDRGATCTSTAVHLAQVHGHHGVYRFLNAMYPGKASPFDAFSDPTVVAEQEMVDQDKSLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFAL 617
[Close]
BLAST of Ec-00_001040.1 vs. uniprot
Match: D8LE58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE58_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 4.530e-116
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 2 
Query: 2264 EGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL 3208
            EGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL
Sbjct:   82 EGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL 396
[Close]
BLAST of Ec-00_001040.1 vs. uniprot
Match: D8LE60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE60_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 3.820e-39
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 2 
Query: 1526 MGGLKLLYRLRARLKRRPQLQLDVKETDHGFAIEKVRKLIFSYQDGGAPALWFPEDANLAAELGHLQLMKTIKG 1747
            MGGLKLLYRLRARLKRRPQLQLDVKETDHGFAIEKVRKLIFSYQDGGAPALWFPEDANLAAELGHLQLMKTIKG
Sbjct:    1 MGGLKLLYRLRARLKRRPQLQLDVKETDHGFAIEKVRKLIFSYQDGGAPALWFPEDANLAAELGHLQLMKTIKG 74
[Close]
BLAST of Ec-00_001040.1 vs. uniprot
Match: D8LE59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE59_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.630e-14
Identity = 49/54 (90.74%), Postives = 49/54 (90.74%), Query Frame = 2 
Query: 1772 MDRAARGGHLDVVKFLCQQGQKCTTXXXXXXXXXXXXXXXVWLHRNTSAGATKA 1933
            MDRAARGGHLDVVKFLCQQGQKCTT     XXXXXXXXXXVWLHRNTSAGATKA
Sbjct:    1 MDRAARGGHLDVVKFLCQQGQKCTTEAIDGXXXXXXXXXXVWLHRNTSAGATKA 54
[Close]
BLAST of Ec-00_001040.1 vs. uniprot
Match: A0A485KE70_9STRA (Aste57867_3767 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KE70_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.390e-6
Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 2 
Query: 2378 GHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEG 2560
            GH      +  MD AA  G+ID+L+ LHD G  CTT+AMD AA  G  E V+WL   R EG
Sbjct:  457 GHNKGEHDRIKMDTAAANGYIDILEYLHDHGATCTTDAMDLAAGKGHFEVVQWLDAMRTEG 517
[Close]
BLAST of Ec-00_001040.1 vs. uniprot
Match: A0A485L118_9STRA (Aste57867_14581 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L118_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.600e-5
Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 2 
Query: 2393 SCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEG 2560
            +CS + MD AAQ GH++ +++LH+ G   ++ AMD AA  G    V+WL  NR EG
Sbjct:  294 TCSTWPMDTAAQHGHVEAIRVLHEHGWPASSRAMDKAAGGGFLNVVQWLHANRNEG 349
The following BLAST results are available for this feature:
BLAST of Ec-00_001040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K2E8_9PHAE2.680e-12658.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE58_ECTSI4.530e-116100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LE60_ECTSI3.820e-39100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LE59_ECTSI1.630e-1490.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A485KE70_9STRA6.390e-649.18Aste57867_3767 protein n=1 Tax=Aphanomyces stellat... [more]
A0A485L118_9STRA5.600e-544.64Aste57867_14581 protein n=1 Tax=Aphanomyces stella... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1342680..1353025 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length4210
Hectar predicted targeting categorymitochondrion
Gene idEc-00_001040.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001040Ec-00_001040Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1342680..1353025 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001040.1Ec-00_001040.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1343678..1351499 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001040.1.13Ec-00_001040.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1342680..1343818 -
Ec-00_001040.1.12Ec-00_001040.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1344375..1344467 -
Ec-00_001040.1.11Ec-00_001040.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1345475..1345649 -
Ec-00_001040.1.10Ec-00_001040.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1346317..1346372 -
Ec-00_001040.1.9Ec-00_001040.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1346900..1347066 -
Ec-00_001040.1.8Ec-00_001040.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1347643..1347754 -
Ec-00_001040.1.7Ec-00_001040.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1348501..1348746 -
Ec-00_001040.1.6Ec-00_001040.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1349124..1349265 -
Ec-00_001040.1.5Ec-00_001040.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1349552..1349691 -
Ec-00_001040.1.4Ec-00_001040.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1349990..1350082 -
Ec-00_001040.1.3Ec-00_001040.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1350305..1350403 -
Ec-00_001040.1.2Ec-00_001040.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1351046..1351157 -
Ec-00_001040.1.1Ec-00_001040.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1351390..1353025 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0010403UTR:Ec-00_001040.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1342680..1343677 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001040.1CDS:Ec-00_001040.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1343678..1343818 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0010405UTR:Ec-00_001040.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1351500..1353025 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001040.1 ID=Ec-00_001040.1|Name=Ec-00_001040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=562bp
MGGLKLLYRLRARLKRRPQLQLDVKETDHGFAIEKVRKLIFSYQDGGAPA
LWFPEDANLAAELGHLQLMKTIKGGFRYSVDAMDRAARGGHLDVVKFLCQ
QGQKCTTEAIDGAAKEGHLEVVVWLHRNTSAGATKAAMDYAAANGFLPVV
QWLHGNRREGCTVSAMNWAAENGHLSVAQFLHHNRREGCTTAAFDRAAMN
NHVHVIMWLTENRSEGGTESALQWAVSRGHTKMVALLLAPRKDSGSEGVA
LKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAA
QGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGCTKDA
MDHAAAGGHLETVKWLHENRREGCTRFALTDAAGNGHMETVEWLHRKRPE
GCGRRAMDDAAANGHVEMVRWLYDNRLEGCSREAMERAARNGHLEVVKLL
HDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQ
EMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGK
PALSRINTFGL*
back to top

spliced messenger RNA

>Ec-00_001040.1 ID=Ec-00_001040.1|Name=Ec-00_001040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4210bp|location=Sequence derived from alignment at chr_00:1342680..1353025- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCCCGGGTTGGTTCGGGCTGCCACCCAGGGTCGACATGCTGTAACGAAGA
CTCATACTTCCAGGCTCCCAGGAGACTAGGTGTACCCCTCCGCCTCATCC
CGCCGACCTTCTCTCTTTCGCCGCGGCGACTTCCCAGGCGTCAAACTACC
GTTGCTGATGAGTGAGGCAGCTGCTCGCTGTACTGCTGTGTACCGATGTC
ACTGCGGCAGCAGAGCACCGAAATGCACCTGGCCAAGTCCGTGTACCCTC
CCTTAATCCTCTATATGTGCTCCCTCCGAGGGCGGGACTCCCCCGAGTAC
TGCCTATGCCCCTTTTTGCTGCTGAAAGCCCGTGCGCAATCGCGATGGCT
CATCTACCGAACGCGCGCGCCGAACACGCGAGTCCGGCCACTGGGCCGCC
GTGAGAACTGCCGAGACGTGTGTGTGCAGGACCGCTAGGAGCAATCAGTA
GGCATGGCCAATGTGTTCGCTGCTGACCGCGCTCCTTTCGTGATTTGGTG
ATGGTAACAGAGCACAGAGCAAGCGTGTGTGAGCCACAGTCTGGCGATAT
TTGAAGTGTCAATCTTTTCGTGTCGGTTTAAGTTTTGACGCTTTTTCACA
AAAATTTCGCCGTCAGAGTTTGCCTCCAAAAAAGCGGCGTAACCTCGTCA
CGTCAAAACTTCCTGAAATGTCAATATTTCACGTCATTTCAACAACACGT
GGATTCCCTCTACTGTAGAAAGCAGATCGGCCTGGATCGGGGGCTGGTTG
AGCTTTGCCGGCGGGCACCAGAGGAGCAGTGGAGGTGGAGGGTGCGGACG
TGCGGAGAAAAGTGCCCGCCTGCGAGAGTTGGTAAGAGAGAGTGTTTTCG
AAGCATCGACGGTGCCCCCGGAAGATGCGGCCAAAATCATCAGCAGTCAT
GAGATAACAAGATGTGGCCTATTAGACTATGTACACAGCTATTTTGCCGT
CTGGTGCCCCAGCCGAGCCCTCTCTCACCTCTCACATCATGCGTGCCTAC
CTTCACACGTGAAGACGCTCTTCTGCGCCGATGATGCGAATCATCACAGA
AAGCGAGAGATGGGCAGAGGTCCCTGACTCATCATGCATGTACACGATGT
ACAGGATCACATCTACGGCTAGACTGTTTCCCACCAGGCGTCGAGAGATC
GAGACTGAATTCTGATTTCGTTTACAATGATACTTCGTACTGTAGTAGTG
TTTCGTCGTACATATCTCAAGAACGAGACAGTCAAATGTCACGTTGTGAT
TTATCGAGTGGTCGGTCGGCCGCGCGGGAGCCCAAAGTCGCCATGCTTTG
TGTAGATGTCTTGTTCCGGCCTCGCAGGAGCCCTGGGAAATTTCTTGAAC
GCACGAAATAAATTTCCGAACCAGTGAAGGACGGTTCACTCTTTGGCCCA
AGTGACCTTTCGTCAACCGAGCGGCGGATACCAAGTCTTGGGTTGAAGCA
TATGCGTCAGTACAGCGAACCGCTAAGATAGAACATCCGCGCCCAGAGAG
CCCAAACCACCCCCACACCCTCGCCTATGGGGGGTTTGAAGCTACTCTAC
CGCCTCCGCGCTCGGTTGAAACGGAGGCCACAGCTGCAACTTGATGTGAA
AGAAACAGATCACGGCTTCGCGATCGAAAAAGTCCGGAAGCTCATCTTTT
CCTATCAAGATGGTGGCGCCCCGGCGCTGTGGTTTCCTGAGGATGCCAAC
TTGGCCGCAGAATTGGGACATCTCCAGCTAATGAAAACCATCAAAGGGGG
ATTCCGCTACTCTGTGGATGCGATGGATCGTGCAGCAAGAGGAGGTCATC
TCGACGTCGTCAAGTTTCTTTGTCAACAGGGCCAGAAATGCACAACGGAA
GCTATTGATGGTGCTGCAAAGGAGGGGCATTTAGAGGTTGTCGTCTGGCT
TCATCGAAACACAAGTGCTGGGGCAACCAAGGCAGCGATGGATTATGCTG
CTGCGAACGGTTTTTTGCCAGTGGTGCAGTGGCTGCATGGCAACAGGCGT
GAAGGATGCACGGTCTCGGCCATGAATTGGGCCGCGGAGAACGGCCATTT
ATCGGTGGCACAATTTCTGCACCACAACAGGCGCGAAGGCTGCACGACTG
CCGCTTTCGATCGCGCCGCGATGAACAACCATGTGCACGTCATCATGTGG
CTCACCGAAAACCGTAGCGAGGGAGGCACCGAGAGCGCCCTGCAATGGGC
AGTGAGTAGGGGGCACACAAAGATGGTTGCCCTTTTGTTGGCACCGAGGA
AGGACAGCGGCAGTGAAGGTGTTGCTCTGAAAACGCGGGGCTCAAATACG
AGCGTCACCAGCATCAATTCACTTGACAGTCTAGGGCTCGGCCTGGACAG
CCCCACCCTCAGCATTGCCCATGGCAATGGGCACTTCGGCTTTAGCTGTT
CCAAGTTCGCCATGGATAAGGCAGCACAGGGAGGACACATTGATGTGCTC
CAACTACTGCACGACCAGGGCCATGAGTGTACGACCAACGCCATGGACTG
GGCTGCGGCGTTCGGAAAAACGGAGACAGTCAAGTGGCTCTCCGAGAATC
GCGAAGAAGGGTGCACGAAAGACGCAATGGACCACGCGGCAGCTGGCGGG
CACCTGGAGACGGTCAAGTGGTTGCACGAAAACAGAAGAGAAGGGTGCAC
GCGCTTCGCCTTGACTGATGCTGCGGGCAACGGTCACATGGAGACAGTCG
AGTGGCTTCACCGAAAACGACCCGAGGGGTGCGGTCGCCGGGCAATGGAT
GATGCCGCTGCAAACGGGCACGTTGAGATGGTTCGCTGGCTTTATGACAA
CAGGTTGGAGGGATGCTCAAGGGAAGCGATGGAGCGCGCTGCTCGAAACG
GGCACCTGGAGGTGGTGAAGCTGCTTCACGACATAGGAGCGACCTGCACG
TCAACGGCTGTTCACCTAGCTCAAGTGCACGGGCACCACGGTGTCTACCG
CTTCCTCAACACTATGTACCCTGGGAAGGCATCACCGTTCGACGCATTCT
CAGACCCGACCGTGGTGGCGGAGCAGGAGATGGTGGATCAGGACAAATGC
TTGGACTTGGTGGTGCAACGAGAGGCGCGGCGGCGGCGGCAATCCGTCAT
CTTTGCTGACACGGTCGAAGCGTCGGAATCTCGACGTCGGGCGTCGCTAC
CGATACCATTTGGGCACAATGGGAAGCCGGCACTCAGCCGCATTAATACG
TTCGGGCTGTAGCCTGTCAAATGTTTGTGAATCCCGTAGATTTGTGGCCG
TTTCCCTTCTCGGTAGGTGGTTGTTCACCCGGTCAAACCTACATTTTGCC
CGTACTACTGGCTGGAATAACTGTTTTCCGCGAGATAAGATAACGTTTCG
TCATGGCGCATTGCCATTTCCCCCTTTTCGCCGGAAGGTGAGATCTCTGA
GGCAGTGTATACTTTATCACGGCTGTTCCGCTAGAACAAGGGAGGAACGA
TAGAAAGGCTGGAACGGTAGAGTTAACGCAAGATGCTTACCCCCGTTTGG
TGCTGTGTTGTTCTTTTTCGTTGACGGAAGCATGCACGATTTTCATGGGA
AGTACAAATTTGTGGTGTGTACACCATCGTGTTTTTGGCGTCGGTAGCTC
TGCGGATGTTTGTTTGTTCCTTCTGTATGTCTTCCGAGTCGATCCGATCC
TGCTTCGCGCAAGTTTGCTCGTGTATTGCAAATCAAATAGATTTAATTCG
CAAGGCAAACCTAGCAGGCGGCTTCGCTTCGCGAGCGCTGGGTGAGCTGT
TGAATGTTCATGGTGTACTTTTGGAATTTGCAAGGTCATTGGTTAAATAT
GATGTATTGAAGTGCAAGGCGGGCCTGGCAGAACAACTGTGCGCAGCACA
TGGCATATTTTGCTTGGAAAAGCAAGAACTTACAGTAGAGAGAATACGAT
ATACTGCATAAGAAGCACGGTCGTGTCTCCTAGACTACTGTGTTGGTGGA
GTACATACCCATTCTTCACATGGCTTCCTTTCGCCTTTATATGGACACCT
CTTGCTCCCATTCTCCCCTCGTCCTGCCACTATCTGCCTCTTTGTTAAGG
CAACTCCGGTTTTTATGCCATTTGTTCATAAAGGGTTTTAGCTTGCTGCC
GCTGAGAGTCATGATCCAGGTCGAAATAATTAAGCGGCCGGCGAAGCGTA
TACCACGTGTGGTCCTCCTGAACGACTCAGGAGGGATGATTTTTTTGTTT
TGCTGCCGAC
back to top

protein sequence of Ec-00_001040.1

>Ec-00_001040.1 ID=Ec-00_001040.1|Name=Ec-00_001040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=562bp
MGGLKLLYRLRARLKRRPQLQLDVKETDHGFAIEKVRKLIFSYQDGGAPA
LWFPEDANLAAELGHLQLMKTIKGGFRYSVDAMDRAARGGHLDVVKFLCQ
QGQKCTTEAIDGAAKEGHLEVVVWLHRNTSAGATKAAMDYAAANGFLPVV
QWLHGNRREGCTVSAMNWAAENGHLSVAQFLHHNRREGCTTAAFDRAAMN
NHVHVIMWLTENRSEGGTESALQWAVSRGHTKMVALLLAPRKDSGSEGVA
LKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAA
QGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGCTKDA
MDHAAAGGHLETVKWLHENRREGCTRFALTDAAGNGHMETVEWLHRKRPE
GCGRRAMDDAAANGHVEMVRWLYDNRLEGCSREAMERAARNGHLEVVKLL
HDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQ
EMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGK
PALSRINTFGL*
back to top

mRNA from alignment at chr_00:1342680..1353025-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001040.1 ID=Ec-00_001040.1|Name=Ec-00_001040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10346bp|location=Sequence derived from alignment at chr_00:1342680..1353025- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCCCGGGTTGGTTCGGGCTGCCACCCAGGGTCGACATGCTGTAACGAAGA
CTCATACTTCCAGGCTCCCAGGAGACTAGGTGTACCCCTCCGCCTCATCC
CGCCGACCTTCTCTCTTTCGCCGCGGCGACTTCCCAGGCGTCAAACTACC
GTTGCTGATGAGTGAGGCAGCTGCTCGCTGTACTGCTGTGTACCGATGTC
ACTGCGGCAGCAGAGCACCGAAATGCACCTGGCCAAGTCCGTGTACCCTC
CCTTAATCCTCTATATGTGCTCCCTCCGAGGGCGGGACTCCCCCGAGTAC
TGCCTATGCCCCTTTTTGCTGCTGAAAGCCCGTGCGCAATCGCGATGGCT
CATCTACCGAACGCGCGCGCCGAACACGCGAGTCCGGCCACTGGGCCGCC
GTGAGAACTGCCGAGACGTGTGTGTGCAGGACCGCTAGGAGCAATCAGTA
GGCATGGCCAATGTGTTCGCTGCTGACCGCGCTCCTTTCGTGATTTGGTG
ATGGTAACAGAGCACAGAGCAAGCGTGTGTGAGCCACAGTCTGGCGATAT
TTGAAGTGTCAATCTTTTCGTGTCGGTTTAAGTTTTGACGCTTTTTCACA
AAAATTTCGCCGTCAGAGTTTGCCTCCAAAAAAGCGGCGTAACCTCGTCA
CGTCAAAACTTCCTGAAATGTCAATATTTCACGTCATTTCAACAACACGT
GGATTCCCTCTACTGTAGAAAGCAGATCGGCCTGGATCGGGGGCTGGTTG
AGCTTTGCCGGCGGGCACCAGAGGAGCAGTGGAGGTGGAGGGTGCGGACG
TGCGGAGAAAAGTGCCCGCCTGCGAGAGTTGGTAAGAGAGAGTGTTTTCG
AAGCATCGACGGTGCCCCCGGAAGATGCGGCCAAAATCATCAGCAGTCAT
GAGATAACAAGATGTGGCCTATTAGACTATGTACACAGCTATTTTGCCGT
CTGGTGCCCCAGCCGAGCCCTCTCTCACCTCTCACATCATGCGTGCCTAC
CTTCACACGTGAAGACGCTCTTCTGCGCCGATGATGCGAATCATCACAGA
AAGCGAGAGATGGGCAGAGGTCCCTGACTCATCATGCATGTACACGATGT
ACAGGATCACATCTACGGCTAGACTGTTTCCCACCAGGCGTCGAGAGATC
GAGACTGAATTCTGATTTCGTTTACAATGATACTTCGTACTGTAGTAGTG
TTTCGTCGTACATATCTCAAGAACGAGACAGTCAAATGTCACGTTGTGAT
TTATCGAGTGGTCGGTCGGCCGCGCGGGAGCCCAAAGTCGCCATGCTTTG
TGTAGATGTCTTGTTCCGGCCTCGCAGGAGCCCTGGGAAATTTCTTGAAC
GCACGAAATAAATTTCCGAACCAGTGAAGGACGGTTCACTCTTTGGCCCA
AGTGACCTTTCGTCAACCGAGCGGCGGATACCAAGTCTTGGGTTGAAGCA
TATGCGTCAGTACAGCGAACCGCTAAGATAGAACATCCGCGCCCAGAGAG
CCCAAACCACCCCCACACCCTCGCCTATGGGGGGTTTGAAGCTACTCTAC
CGCCTCCGCGCTCGGTTGAAACGGAGGCCACAGCTGCAACTTGATGTGAA
AGAAACAGATCACGGCTTCGCGATCGAAAAAGTCCGGTGAGCGACTCACT
CTCACGCTGTTCCCATCAGTGGGCAGACGGTGTATCTTGCAGCATGGGGT
ACTGAACAAGCCTGATAAGCCAACGTGATGCCGTTGCTCACTCTGAGAGT
ACAAGCAAATCCATAGGGAAAAGTATCCTGTAGATGAATTTGTTTATAGA
TTGTCTTGGAACAGGGTTGTCTCCGAACAACTACACAACTTGCATGCTCT
GCTGTTGTGTGCGTGCAGGAAGCTCATCTTTTCCTATCAAGATGGTGGCG
CCCCGGCGCTGTGGTTTCCTGAGGATGCCAACTTGGCCGCAGAATTGGGA
CATCTCCAGCTAATGAAAACCATCAAAGGGGTAAAGAGTGGCCAGATCCT
CTTTACGAGTAGGAATCTCAAGGTGTCACGGAGCAAAATCGCCCGGTGAT
TTTCTCCACGGTACATAGATAGTCTACATCGAGAGACTTCGTACCCGTTC
ACTCAAACATATCGTTGGTTGCCCTTCAGTAGTGCCACGCTTCCGTGATG
TTGAAATATCTTAGGTTTAATCTCCCCGGTGCTCTGAGGGCCAACATCGT
AGCGTCCCTATTCCGTACGAATGTCTGAAGTCGTCGTCGTAAGCGAGGGG
CCGGGCCAGACAGACCACACGTAAGAGATGGGTTCATCATCTTAGCTTCA
CATTAATCTTTTGATTTTCCAACTTAGTCAAGTAGATCGTTGGCGAGTGC
CGTGACGCCCGCACTTGCGAAACTGGAACTACGTAAGAATGAAGCGAAGC
CTACAGCGTACGTACGTCCGGTGGAATCGAAAACCCCACAGACCCACCCC
ATAAGCACGCATCTAGGTCTCACGGTGTGGGATTAAAAGCTAGCCCTCGG
CAGGGGGTCATCAAACATATTGCTCGAGAGTAAAGTTGGTGACGATACCA
GTGAGATCCACAGTGTTTGGGGTTGGTGCTTGAGCTCGATCCTGTCACAC
TTGATTTTATGGATGGCAATAGGGATTCCGCTACTCTGTGGATGCGATGG
ATCGTGCAGCAAGAGGAGGTCATCTCGACGTCGTCAAGTTTCTTTGTCAA
CAGGGCCAGAAATGCACAACGGTAAGTACAAGACCTGCCATTTTTCGCCA
AAATCACGGAGACCTCACAATAGTACTTGAACCAAGGACTTTGGTGTAAA
ACGTTGCGACCAGCCATGTTACCCTTGCCACCTGCTTCCTCAGTAGGAAA
AGCGTGTGTTTGGCCCTACATAGATCAGCACTCGTTTCCACTCGGGTGCG
GTTGGTATCGCAGAATAATCGACCACTTCCTTTGAAACCGCAGGAAGCTA
TTGATGGTGCTGCAAAGGAGGGGCATTTAGAGGTTGTCGTCTGGCTTCAT
CGAAACACAAGTGCTGGGGCAACCAAGGCAGCGATGGTGCGAAACGAGAT
ATTGCCTTGTTTGTCTTTCGCTTGACTATCCAGTTGGCAATGCTTGAGCT
TAACACACAAACGTTATCAAGCACTTGATGCGTCCTCTCATTCTGCAGGA
CCTGGGAATGACGAGACATTTTTTGCTATGTGACAGTACAACACGTTTGG
AGGACTCACAAGTGATCTGGCTCATACTTGCATTTCTTCGCTCAACTTGA
TAGAATGACCTGGTATTGGCACTGTATGGAGCTGGCACTGGTGTTGCTGC
TGCTGCTACCACTACTCCTGTTGTTGTCGCATAGGATTATGCTGCTGCGA
ACGGTTTTTTGCCAGTGGTGCAGTGGCTGCATGGCAACAGGCGTGAAGGA
TGCACGGTCTCGGCCATGAATTGGGCCGCGGAGAACGGCCATTTATCGGT
GGCACAATTTCTGCACCACAACAGGCAAGTACACCTACGCTTGGCTCTAG
GAGGTGGATATCTTATTTATGCAAGTCCTCAAGGGTTGGACCAAGAACGC
TGTAGGAGTGTAGTGACCGACGGTCATGATAAAGCCATTACTTCTCGATG
CAGCAGGAAACGTACGTGTGGTACGACATGACGCAGGCGAGTCGCCCATG
CATGCAAAATATTTGGCTTCCTGCGCGAAACCTTGTCCATGCTTCGAGGC
TGATACGCCGTATGCAGAACAGACGTTGCCCGACAGGCTATGTGACTTGT
CGTCTTGCAGGCGCGAAGGCTGCACGACTGCCGCTTTCGATCGCGCCGCG
ATGAACAACCATGTGCACGTCATCATGTGGCTCACCGAAAACCGTAGCGA
GGGAGGCACCGAGAGCGCCCTGCAATGGGCAGTGAGTAGGGGGCACACAA
AGGCAAGCAAACACCGGCATATGGCCGTGTAAGGTATTCTCATGATGACA
AAATTAAACTGGTGGGAATACCAAAGTCACGTCGGTATGCTAATAGGAAC
ACATTGGACGTTCAGTATTTTCATGAACTGAGACAACTGAGGGATACTGA
ATTGTCGAGAGACATCAAGATGTGATGCAAGTTGTAGTAAAGTTTCTGAT
TCTGCACTCGGTATCTTCAAGTGTCTGTCTACAACAATGTCGCACCAACA
GCGGTTGACATGGTTGCCGATTTCAAGACCCGAAACGGCTCGACCATCTG
CTCGTGTGAATCTCACTGCGTCTGCCCTCCAATCATGTTACCCCCCGTCC
TCCCACGTCCTCGCGCCTAAATTACGTAGATGGTTGCCCTTTTGTTGGCA
CCGAGGAAGGACAGCGGCAGTGAAGGTGTTGCTCTGAAAACGCGGGGCTC
AAATACGAGCGTCACCAGCATCAATTCACTTGACAGTCTAGGGCTCGGCC
TGGACAGCCCCACCCTCAGCATTGCCCATGGCAATGGGCACTTCGGCTTT
AGCTGTTCCAAGTTCGCCATGGATAAGGCAGCACAGGGAGGACACATTGA
TGTGCTCCAACTACTGCACGACCAGGTGAGGTGTCATAGAACATACCGCC
TACGGAATATTGGGGACCCTTGCTCCACTTCATGACGTCATTCCTCTTTG
GTGCGACCCGTCCAACCGATCTCTGGGGATGGATCTTGTCCAATCCGGTA
TGGTGACAGGAGGGAAGGTCGTAGAGTGCGACAAACATCTGGTTGCAGAG
TGGTAGCCTCGTTTCGCCTGATCTCCCCACTGATTGGACTATTCGCAGGT
CTTGATCGTGGTTTTGATCAGAGCGCCGTGCGCCGAGAAACAAGGCTGTG
TGAGTCTGGTTGTTTGAAGGTGTTGCCGTATGTTTCTTGTCGAAGAGTTT
GCAGCATCAAGCGAAAAATGACGTGCTGTAATCACCGTGTAGTTGCCGCT
AGTGTACAGCTTGAAGGACACTGTTGGGGGAATGTCGACTCGAATGATCT
TTAAGCTCAGCAGCGGGTTCTACAAGCGGATACTTGACGAAAAGCCGCAA
GTATGACTCTGTCAAGAGTTCACATTCGATATTTGGTCGTAGGTATAGCC
TCTGACGCGTAAAGCCAAGTCCGACATGGGTGACGCCGATGTTCTCAAGG
TATCCATGCTTGGAGATTAACAATAAAAGTTCTGCTCTACCGTGACAGGC
ATGCCACTATCCTTCGCGCAGTTGTGGCCGCGAATACATCGTCGCACCCC
ACCATATTGTAGACGACATAATTGTTTTTTCGTCCAAAGAGCTTAGAGGA
TGCTACACTGCTGTTTCCCAGGGCCATGAGTGTACGACCAACGCCATGGA
CTGGGCTGCGGCGTTCGGAAAAACGGAGACAGTCAAGTGGCTCTCCGAGA
ATCGCGAAGAAGGGTGCACGAAAGACGCAATGGGTGAGGTATAGACTACG
GCAGGAATGTCACGATATTGTGGCGACTGACATTTCTACAGATCAGCATG
GAATATAATGTCAAGTATACGCATAGCTGGCTTCGCTCAGATCGTGTCCA
TTCCGGAAACGCCTAACCTTAATGTAGATTAGCGTGTCGGCAGCCATTAC
TCAACCTATTGCAGCATGGAAGTGTCACCGGCTTGAGTTACATGGGGTGG
GACGTCAGTATGTTTCGCCGCCGGAAAGCACGAGCGACTCCAGCGTCATC
TTGAGTAGACTGCGTGCGTGAACATTGTTGCTCATAGAGGTATGATGCAT
CACGATACAAAGGTTCTTGAATCCCAACATCGACAATCGGCGACCTTCGT
TTGAGATGCACCACGACCATCGAGTCCTCGTGTGTTGCAAAGCAATACAA
GTGGTCTACACCCATGAAATGTGCTCAACTGTGACTCAGTTGGTTCTCAG
AGGACCGTCTGTTTGAGAAGGCTACAGTAGTTATGACGTTCTCTCGATAT
AGGCTACCACACACCGTATCCACATCCTTTATCGAGGTTTTCCCGACGTG
ACACGTCAGACCACGCGGCAGCTGGCGGGCACCTGGAGACGGTCAAGTGG
TTGCACGAAAACAGAAGAGAAGGGTGCACGCGCTTCGCCTTGACTGATGC
TGCGGGCAACGGTCACATGGAGACAGTCGAGTGGCTTCACCGAAAACGAC
CCGAGGGGTGCGGTCGCCGGGCAATGGTGAGAGCGCCGGAGCGTCATTGC
AGTTTATTGTAGTACTATGGAACAAAACACAAGATTTTACTAATATTATT
CTTCAGAACCTGTTTCCACGAAAAGGAGAACTATATGATCGTAGTGGGTT
GGCCGGACCGGGAGCCTCAGAACATTCACAATCAGATTAGAGAAATAACT
CATCACACCGCCGTCGACGAGATACGGCGCTGCGGTGGTAACTCGCTACA
CAAAATCAGGATTTCCTTAATCTTCTAATCTCGTTGAAACCAACTTCGCG
GTTCGAGGATGTTCGCCGAAAGTGAAAATTGTTCGATATCGCGTCCCCAA
CGCCGCTCTGAAATCGCCTAGACAAATGAAAGGCTAAGGTTGTGCAAAAT
GCAGTCCTTATACTCACTGGAACCTGCCCCTGGCTTGGCATCATGCTACA
TCAGCTCGCAAAACGTGCGTGGTACAATAACAAAAAAGAAGAGTGTACTT
TGAACACAGACAACTCTTCTTCGGATATTGTTTTATCGATGACAACATGG
CAGGATGATGCCGCTGCAAACGGGCACGTTGAGATGGTTCGCTGGCTTTA
TGACAACAGGTGCGACCACTTTGAAGACAACCCCGAATACCTATTCAACG
ATGCTCTAACCTGCGGCCTGAGTATCTGCGTTCATCGTCGTATATCTTTA
CGACCGCAAACGTAATGATAGGAGAAGCTTATGGGCTACGAGTTTCGACA
GCGAATGCTAAATGCCATGAAGCTCCGAACTGCGTGGTGTTGGCAGGGCG
TGTGCCACTCAAGTTCTACATCGTGCTACAAGACTTGATACGGGATCTTC
TCGGCAAAAGTCTATGATCACCGCCCATCGCGTTACTCCATGCGGTTGGG
CACAATATTCTACAACAATATCTATACTCCCGTTGTTCTGTAACCTTGTA
TACGCGTCCCCACATTAACGCCGAAGGGCGCTTTTTGTTTGTGACACCTA
CAGCCCTCGCAAGCAGCGGGTAGGCCAAGCATATTTCATCGCATCCTTCA
GCTCTGGAGGGATTCTTGACACCAAAGACAACAAATCTAGGCTCACTTCC
AAGCGTACCGCAGACAGGCAGGCATGCTGTACACTCCTGCTATCGCCAAC
GCCCAGCTCCGCATACGTAGCCAGCGTGGGTTTTCATGGGTACCGGTATG
GTCTATAACACTGCTTTACACTGCTTTCAAGGGAAACGCGAGTGGGCTAA
TTTGCACCTGCACCTTGTGCCGACAGGTTGGAGGGATGCTCAAGGGAAGC
GATGGAGCGCGCTGCTCGAAACGGGCACCTGGAGGTGGTGAAGCTGCTTC
ACGACATAGGAGCGACCTGCACGTCAACGGCTGTTCACCTAGCTCAAGTG
CACGGGCACCACGGTGTCTACCGCTTCCTCAACACTATGTACCCTGGGAA
GGTAATCTGGGTGGAATCATGGGAGTTGGACTGAGCACTATCGAGCCAGA
CTTGAATCGAAAACGGTGTTCCTTTCCATCATTTTACGAGGTGGCAAATT
TCCAAGAGATGTTCCCGTAAACAGTTGATAGTATCGTATTGAGACAGTGG
CAAGCGCCACGTGTGAACACTCCAAGATTTTCAAGCCATCGTCAGGCGTT
TGTGCCACAGTCTGTCGTTTATTGAAAATGTTCCCCAAGATGTGAACAAA
CGGGTAGAGGGGGGGGGATCTCACGGACAAACCCTCTTGGAACGGGCAGT
TGTGACCCACTATCCGTCTACCCCTAGCACACGAGAAAACGCTTTGCTTG
TCTGTTGGATAATAGCAGCAACCGTCTTTGGTACCGATGATTTCAGTAGC
TCGGCGACAAGGAAGCAATATTCTTCTATCCAACTAACACATTTCGTTGA
CCATGTGCACTCAATATTAAATTAACAATACGTTCATGGTGAGGGTGATT
GGGGTGAGGTCGCTGCGGATGGTGTGTAAAGGTTCTTATTTGCAAAGGTT
ACCCCTCTAGGGGAGCACGGCGTTTCAACCACATTTTCAGCTGCTTCTTT
TTTTCTGGCGGGGACACGTTAGCGGAGAGGTAGGTGCAACATGCATCCTT
TTGCCGCAGCTTGGCACGAGACGATAGGTTTACCCCCGTAAGACAACATC
TTCGGGGGCGCACTCACGCTGCGCCATTAGTCAGAAACGCGGTGCTCACA
TTTTTACCAACAGTACCCAGGAACGATCAAACCGACGTATGTGTTCGACG
GCAGTAGGTGTTCCAGCGTTGTATTGGCGGTTGAGTCGTGCACGCCCAAA
CAATGCACCTTTGGGCTTCTACGTGCCAGACGTTCGAACAAGTACACATT
TCCGAAACGATTGCGCCCATGCGCTGTTTTTTCCGACATCGCGGAAGAAG
CGTACGATACAACACAAACGTTGGTAACTTTTCAATGGATCAAACCCGAC
CTTCTCAGGCATCACCGTTCGACGCATTCTCAGACCCGACCGTGGTGGCG
GAGCAGGAGATGGTGGATCAGGACAAATGCTTGGACTTGGTGGTGCAACG
AGTGAGAACCATACGTCGCAATAAGATCAGGGTCGATCGTGGTGTACACA
TGAGCAGATTCGGTTGGAATTAAAGCCGTGGTTCATCATCAGTGCAGTGA
AGTGCGTACACTAACACCGGGTGGTCCTAGCGTGATTATGTGTTCCCTGA
TAACGAGAATAGCTGGGAACATTTCGCAATTCCTGTTCTATGGAAAGTAG
TCCTGGGCGCTTTGAAACGTGCACGACTTAGGACTCGAGTAGGCATCAAC
CTGTCTTGTGCTCCGTTCCTCACGGCGTCAAAGCGAAGAAGGCCGTCCTG
GTTTCTGGGTACTCGTTTTGGCGCACGAACCATCTCGCAGGTCTCCGCTT
GAGAACCTCCATCTTTTCGTTACAACTATGGTAGTGGTTTTCTTCTTGGC
CTTCCAAGTTGTCCATCGCTTGTTGGGCAGGATGGGCCAGAGCGATACGT
TTCGCAAGATGCCGCCTGACTGTTCCTTTCTTTCCGCGCCTTCTCTTTTA
CCGCGCTCCCAATTATGATGTTATTCATCGGCTTCGACACCTCGTTCGCT
TCACCAGGAGGCGCGGCGGCGGCGGCAATCCGTCATCTTTGCTGACACGG
TCGAAGCGTCGGAATCTCGACGTCGGGCGTCGCTACCGATACCATTTGGG
CACAATGGGAAGCCGGCACTCAGCCGCATTAATACGTTCGGGCTGTAGCC
TGTCAAATGTTTGTGAATCCCGTAGATTTGTGGCCGTTTCCCTTCTCGGT
AGGTGGTTGTTCACCCGGTCAAACCTACATTTTGCCCGTACTACTGGCTG
GAATAACTGTTTTCCGCGAGATAAGATAACGTTTCGTCATGGCGCATTGC
CATTTCCCCCTTTTCGCCGGAAGGTGAGATCTCTGAGGCAGTGTATACTT
TATCACGGCTGTTCCGCTAGAACAAGGGAGGAACGATAGAAAGGCTGGAA
CGGTAGAGTTAACGCAAGATGCTTACCCCCGTTTGGTGCTGTGTTGTTCT
TTTTCGTTGACGGAAGCATGCACGATTTTCATGGGAAGTACAAATTTGTG
GTGTGTACACCATCGTGTTTTTGGCGTCGGTAGCTCTGCGGATGTTTGTT
TGTTCCTTCTGTATGTCTTCCGAGTCGATCCGATCCTGCTTCGCGCAAGT
TTGCTCGTGTATTGCAAATCAAATAGATTTAATTCGCAAGGCAAACCTAG
CAGGCGGCTTCGCTTCGCGAGCGCTGGGTGAGCTGTTGAATGTTCATGGT
GTACTTTTGGAATTTGCAAGGTCATTGGTTAAATATGATGTATTGAAGTG
CAAGGCGGGCCTGGCAGAACAACTGTGCGCAGCACATGGCATATTTTGCT
TGGAAAAGCAAGAACTTACAGTAGAGAGAATACGATATACTGCATAAGAA
GCACGGTCGTGTCTCCTAGACTACTGTGTTGGTGGAGTACATACCCATTC
TTCACATGGCTTCCTTTCGCCTTTATATGGACACCTCTTGCTCCCATTCT
CCCCTCGTCCTGCCACTATCTGCCTCTTTGTTAAGGCAACTCCGGTTTTT
ATGCCATTTGTTCATAAAGGGTTTTAGCTTGCTGCCGCTGAGAGTCATGA
TCCAGGTCGAAATAATTAAGCGGCCGGCGAAGCGTATACCACGTGTGGTC
CTCCTGAACGACTCAGGAGGGATGATTTTTTTGTTTTGCTGCCGAC
back to top

Coding sequence (CDS) from alignment at chr_00:1342680..1353025-

>Ec-00_001040.1 ID=Ec-00_001040.1|Name=Ec-00_001040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1686bp|location=Sequence derived from alignment at chr_00:1342680..1353025- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGGGGTTTGAAGCTACTCTACCGCCTCCGCGCTCGGTTGAAACGGAG
GCCACAGCTGCAACTTGATGTGAAAGAAACAGATCACGGCTTCGCGATCG
AAAAAGTCCGGAAGCTCATCTTTTCCTATCAAGATGGTGGCGCCCCGGCG
CTGTGGTTTCCTGAGGATGCCAACTTGGCCGCAGAATTGGGACATCTCCA
GCTAATGAAAACCATCAAAGGGGGATTCCGCTACTCTGTGGATGCGATGG
ATCGTGCAGCAAGAGGAGGTCATCTCGACGTCGTCAAGTTTCTTTGTCAA
CAGGGCCAGAAATGCACAACGGAAGCTATTGATGGTGCTGCAAAGGAGGG
GCATTTAGAGGTTGTCGTCTGGCTTCATCGAAACACAAGTGCTGGGGCAA
CCAAGGCAGCGATGGATTATGCTGCTGCGAACGGTTTTTTGCCAGTGGTG
CAGTGGCTGCATGGCAACAGGCGTGAAGGATGCACGGTCTCGGCCATGAA
TTGGGCCGCGGAGAACGGCCATTTATCGGTGGCACAATTTCTGCACCACA
ACAGGCGCGAAGGCTGCACGACTGCCGCTTTCGATCGCGCCGCGATGAAC
AACCATGTGCACGTCATCATGTGGCTCACCGAAAACCGTAGCGAGGGAGG
CACCGAGAGCGCCCTGCAATGGGCAGTGAGTAGGGGGCACACAAAGATGG
TTGCCCTTTTGTTGGCACCGAGGAAGGACAGCGGCAGTGAAGGTGTTGCT
CTGAAAACGCGGGGCTCAAATACGAGCGTCACCAGCATCAATTCACTTGA
CAGTCTAGGGCTCGGCCTGGACAGCCCCACCCTCAGCATTGCCCATGGCA
ATGGGCACTTCGGCTTTAGCTGTTCCAAGTTCGCCATGGATAAGGCAGCA
CAGGGAGGACACATTGATGTGCTCCAACTACTGCACGACCAGGGCCATGA
GTGTACGACCAACGCCATGGACTGGGCTGCGGCGTTCGGAAAAACGGAGA
CAGTCAAGTGGCTCTCCGAGAATCGCGAAGAAGGGTGCACGAAAGACGCA
ATGGACCACGCGGCAGCTGGCGGGCACCTGGAGACGGTCAAGTGGTTGCA
CGAAAACAGAAGAGAAGGGTGCACGCGCTTCGCCTTGACTGATGCTGCGG
GCAACGGTCACATGGAGACAGTCGAGTGGCTTCACCGAAAACGACCCGAG
GGGTGCGGTCGCCGGGCAATGGATGATGCCGCTGCAAACGGGCACGTTGA
GATGGTTCGCTGGCTTTATGACAACAGGTTGGAGGGATGCTCAAGGGAAG
CGATGGAGCGCGCTGCTCGAAACGGGCACCTGGAGGTGGTGAAGCTGCTT
CACGACATAGGAGCGACCTGCACGTCAACGGCTGTTCACCTAGCTCAAGT
GCACGGGCACCACGGTGTCTACCGCTTCCTCAACACTATGTACCCTGGGA
AGGCATCACCGTTCGACGCATTCTCAGACCCGACCGTGGTGGCGGAGCAG
GAGATGGTGGATCAGGACAAATGCTTGGACTTGGTGGTGCAACGAGAGGC
GCGGCGGCGGCGGCAATCCGTCATCTTTGCTGACACGGTCGAAGCGTCGG
AATCTCGACGTCGGGCGTCGCTACCGATACCATTTGGGCACAATGGGAAG
CCGGCACTCAGCCGCATTAATACGTTCGGGCTGTAG
back to top
Synonyms
The feature 'Ec-00_001040.1' has the following synonyms
Synonym
Esi0013_0026
Esi_0013_0026