Ec-28_003710.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_003710.1
Unique Name	Ec-28_003710.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	324

Homology

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BLAST of Ec-28_003710.1 vs. uniprot
Match: D8LTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK8_ECTSI)

HSP 1 Score: 600 bits (1546), Expect = 6.290e-216
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0

Query:    1 MKRSTPFYHSTNKHYLPTWLFHLLYNTPSFSFRLYLCERRVSDFRRALAGAAVLIGLAQSSSGSGWSGLRAGQNYGDVSNVDATHDARLGLGGGEWGGVRSLQEATDPLCSLPEEDPCTLNTTAIGMVEWGTSTYYDGTCEAGTQGCYTDGIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVRAFNYSVFTISASDCTITPTFTPLVSTEAPAAVDGAQPVTTPTXXXXXXXXXXXXXXXXXXXXXVPSIPTPAPDGGVDEGGADASDKNDGLSMGAKIGIGVAAAAGVIFLGIVGFAAIKASRKG 323
            MKRSTPFYHSTNKHYLPTWLFHLLYNTPSFSFRLYLCERRVSDFRRALAGAAVLIGLAQSSSGSGWSGLRAGQNYGDVSNVDATHDARLGLGGGEWGGVRSLQEATDPLCSLPEEDPCTLNTTAIGMVEWGTSTYYDGTCEAGTQGCYTDGIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVRAFNYSVFTISASDCTITPTFTPLVSTEAPAAVDGAQPVTTPTXXXXXXXXXXXXXXXXXXXXXVPSIPTPAPDGGVDEGGADASDKNDGLSMGAKIGIGVAAAAGVIFLGIVGFAAIKASRKG
Sbjct:    1 MKRSTPFYHSTNKHYLPTWLFHLLYNTPSFSFRLYLCERRVSDFRRALAGAAVLIGLAQSSSGSGWSGLRAGQNYGDVSNVDATHDARLGLGGGEWGGVRSLQEATDPLCSLPEEDPCTLNTTAIGMVEWGTSTYYDGTCEAGTQGCYTDGIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVRAFNYSVFTISASDCTITPTFTPLVSTEAPAAVDGAQPVTTPTXXXXXXXXXXXXXXXXXXXXXVPSIPTPAPDGGVDEGGADASDKNDGLSMGAKIGIGVAAAAGVIFLGIVGFAAIKASRKG 323

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BLAST of Ec-28_003710.1 vs. uniprot
Match: A0A6H5KCT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT7_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 3.570e-61
Identity = 121/234 (51.71%), Postives = 132/234 (56.41%), Query Frame = 0

Query:  127 MVEWGTSTYYDGTCEAGTQGCYTDGIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVRAFNYSVFTISASDCTITPTFTPLVSTEAPAA-----------------------------VDGAQPVTTPTXXXXXXXXXXXXXXXXXXXXXVPSIPTPAPDGGVDEGGADASDKND---------GLSMGAKIGIGVAAAAGVIFLGIVGFAAIKASRK 322
            MVE GTSTYYD TCEAG QGCYTDG+RECRTCYLSTEIYMD TNATEASRPPWAMCPCCVPATL+S HDD+EV+AFNYSVF ISASDCTITPT                                           G++ + TP                      +PS P P P  G    GA                GLSMGAK+GIG AAA GVIFLG+VGF AIKAS +
Sbjct:    1 MVESGTSTYYDDTCEAGIQGCYTDGVRECRTCYLSTEIYMDATNATEASRPPWAMCPCCVPATLQSDHDDIEVKAFNYSVFGISASDCTITPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGSRAMDTPVPSVAGSTY-------------IPSTPIPTP--GASSDGAXXXXXXXXXXXXXXXXGLSMGAKVGIGAAAAVGVIFLGVVGFRAIKASSR 219

The following BLAST results are available for this feature:

BLAST of Ec-28_003710.1 vs. uniprot

BLAST of Ec-28_003710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LTK8_ECTSI	6.290e-216	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KCT7_9PHAE	3.570e-61	51.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..295
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 318..323
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 296..317
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 296..317

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:3560777..3565484 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_003710.1	Ec-28_003710.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 3560777..3565484 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_003710.1 ID=Ec-28_003710.1|Name=Ec-28_003710.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=324bp
MKRSTPFYHSTNKHYLPTWLFHLLYNTPSFSFRLYLCERRVSDFRRALAG
AAVLIGLAQSSSGSGWSGLRAGQNYGDVSNVDATHDARLGLGGGEWGGVR
SLQEATDPLCSLPEEDPCTLNTTAIGMVEWGTSTYYDGTCEAGTQGCYTD
GIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVR
AFNYSVFTISASDCTITPTFTPLVSTEAPAAVDGAQPVTTPTPVDPPTDT
PPVAPTPEPTETPVPSIPTPAPDGGVDEGGADASDKNDGLSMGAKIGIGV
AAAAGVIFLGIVGFAAIKASRKG*