Ec-28_003600.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003600.2
Unique NameEc-28_003600.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length987
Homology
BLAST of Ec-28_003600.2 vs. uniprot
Match: D8LTM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM0_ECTSI)

HSP 1 Score: 1257 bits (3253), Expect = 0.000e+0
Identity = 863/986 (87.53%), Postives = 863/986 (87.53%), Query Frame = 0
Query:    1 MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTADLSAAVSGLAAALLTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYAVHARPKFFHPRPKSLSQLLDSASSGNTSSSLMGSFGGNVPXXXXXXXXXXXXXXAYRGRRRSESSISADGRGYAEGRSARGDIGGLGGSGYGSSSNVGGRLPRPHSIGVTSSTPSFSSFRASSLQRRYSSGPIRRLPPVVDMSPESSGHGSLSRSSSNSRGQSPPPAVPSSNLPPKSEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEVSPSSSRGTPYTARARGAVEKGSGSGRYGRPVGALYFASRTTKNMRRTPGSSSSGTALGNADGAVVNTGIAIARSMPPRSMSARAAGAKHDESTSAVRSASTASLTXXXXXXXXXXXTAADRIPSRCSSISTMPAAAPELAGDDREPGAAVATSRLGIPDAVVTAAPWKWHQQPGLTKLQRPLRSTNNWASSRLMKVALATDASSGSFSAVSSETTSSSSPERHAEAHKKMATETPDGVRIAAXXXXXXXXHTVVWPLPLNASSRASPPSGGKRHARLSARTLASSPSAAKVRAEKKEARRTGSGSRRNWHXXXXXXXXXEXXXXXXXXXXXXXXXXGGRPPSSFLWREVGLQGTCSHPEAPDXXXXXXXXATTNDVGAHAAETCKRPPLERRTSSSATNRSRYSAAAWXXXXXXXXCSSSFDGNDNQRGAPAATVRSPASFYEGNDSNG 986
            MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTADLSAAVSGLAAALLTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYAVH                                                                                                                           RRYSSGPIRRLPPVVDMSPESSGHGSLSRSSSNSRGQSPPPAVPSSNLPPKSEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEVSPSSSRGTPYTARARGAVEKGSGSGRYGRPVGALYFASRTTKNMRRTPGSSSSGTALGNADGAVVNTGIAIARSMPPRSMSARAAGAKHDESTSAVRSASTASLTXXXXXXXXXXXTAADRIPSRCSSISTMPAAAPELAGDDREPGAAVATSRLGIPDAVVTAAPWKWHQQPGLTKLQRPLRSTNNWASSRLMKVALATDASSGSFSAVSSETTSSSSPERHAEAHKKMATETPDGVRIAAXXXXXXXXHTVVWPLPLNASSRASPPSGGKRHARLSARTLASSPSAAKVRAEKKEARRTGSGSRRNWHXXXXXXXXXEXXXXXXXXXXXXXXXXGGRPPSSFLWREVGLQGTCSHPEAPDXXXXXXXXATTNDVGAHAAETCKRPPLERRTSSSATNRSRYSAAAWXXXXXXXXCSSSFDGNDNQRGAPAATVRSPASFYEGNDSNG
Sbjct:    1 MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTADLSAAVSGLAAALLTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYAVH---------------------------------------------------------------------------------------------------------------------------RRYSSGPIRRLPPVVDMSPESSGHGSLSRSSSNSRGQSPPPAVPSSNLPPKSEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEVSPSSSRGTPYTARARGAVEKGSGSGRYGRPVGALYFASRTTKNMRRTPGSSSSGTALGNADGAVVNTGIAIARSMPPRSMSARAAGAKHDESTSAVRSASTASLTXXXXXXXXXXXTAADRIPSRCSSISTMPAAAPELAGDDREPGAAVATSRLGIPDAVVTAAPWKWHQQPGLTKLQRPLRSTNNWASSRLMKVALATDASSGSFSAVSSETTSSSSPERHAEAHKKMATETPDGVRIAAXXXXXXXXHTVVWPLPLNASSRASPPSGGKRHARLSARTLASSPSAAKVRAEKKEARRTGSGSRRNWHXXXXXXXXXEXXXXXXXXXXXXXXXXGGRPPSSFLWREVGLQGTCSHPEAPDXXXXXXXXATTNDVGAHAAETCKRPPLERRTSSSATNRSRYSAAAWXXXXXXXXCSSSFDGNDNQRGAPAATVRSPASFYEGNDSNG 863          
BLAST of Ec-28_003600.2 vs. uniprot
Match: A0A6H5JF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF49_9PHAE)

HSP 1 Score: 919 bits (2376), Expect = 0.000e+0
Identity = 646/933 (69.24%), Postives = 664/933 (71.17%), Query Frame = 0
Query:   54 LTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYAVHARPKFFHPRPKSLSQLLDSASSGNTSSSLMGSFGGNVPXXXXXXXXXXXXXXAYRGRRRSESSISADGRGYAEGRSARGDIGGLGGSGYGSSSNVGGRLPRPHSIGVTSSTPSFSSFRASSLQRRYSSGPIRRLPPVVDMSPESSGHGSLSRSSSNSRGQSPPPAVPSSNLPPKSEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEVSPSSSRGTPYTARARGAVEKGSGSGRYGRPVGALYFASRTTKNMRRTPGSSSSGTALGNADGAVVNTGIAIARSMPPRSMSARAAGAKHDESTSAVRSASTASLTXXXXXXXXXXXTAADRIPSRCSSISTMPAAAPELAGDDREPGAAVATSRLGIPDAVVTAAPWKWHQQPGLTKLQRPLRSTNNWASSRLMKVALATDASSGSFSAVSSETTSSSSPERHAEAHKKMATETPDGVRIAAXXXXXXXXHTVVWPLPLNASSRASPPSGGKRHARLSARTLASSPSAAKVRAEKKEARRTGSGSRRNWHXXXXXXXXXEXXXXXXXXXXXXXXXXGGRPPSSFLWREVGLQGTCSHPEAPDXXXXXXXXATTNDVGAHAAETCKRPPLERRTSSSATNRSRYSAAAWXXXXXXXXCSSSFDGNDNQRGAPAATVRSPASFYEGNDSNG 986
            L   L   GLAYWFNGIGGYDC AFST+MGASLSASNAM FIHLFILSNSMHRANSRWKHFRW GVII VFHWVALVALEGTRTAGKEE GGCAGESRCVTDVDGLAL VKW+ QLLNQ+FQTVAFLVPLRMP A AANGVRLFSGGLKATGSCRKCLNIS                                                                                                                                                                             ASSLQRRYSSGPIRRLPPVVDMSPESSGHGS SRSSSNS G+SPPPAVPSSNLPPKSE PAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XX VAEVSPSSSRGTPYTARA+G  EK SGSGRYGRPVGALYFASRTTKNMRRTPG S++GTA+GNADG VVNTGIA  RS PPRSMSARAAGAKHDESTSAVRSASTAS+T           TAA+RI SRCSSISTMPAAAP  AGDDREPGA VAT+RLGIPDAVVTAAPWKWHQQPGLTKLQRPL ST++WASSRLMKVALATDASSGSFSAVSSETTSS+SPERHAEAHKKM TETPDGVRIAAXXXXXXX HTVVWPLPLNAS+RAS PSGGKRHARLSAR LASSPSAAKVRAEKKEARRTGSGSRRNWH         E                GGRPPSSFLWREVGLQGT SH EAPD        +TTND GAHAAET KRP LERRTSSSAT+RSRYS    XXXXXXXXCSSSFDGNDNQRGAPAATVRSP +FYEGNDSNG
Sbjct:   11 LAPLLAFTGLAYWFNGIGGYDCFAFSTIMGASLSASNAMGFIHLFILSNSMHRANSRWKHFRWFGVIIMVFHWVALVALEGTRTAGKEERGGCAGESRCVTDVDGLALTVKWIMQLLNQMFQTVAFLVPLRMPAAEAANGVRLFSGGLKATGSCRKCLNIS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASSLQRRYSSGPIRRLPPVVDMSPESSGHGSPSRSSSNSCGESPPPAVPSSNLPPKSETPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASARXXGVAEVSPSSSRGTPYTARAKGTAEKRSGSGRYGRPVGALYFASRTTKNMRRTPGPSTTGTAMGNADGVVVNTGIAFTRSTPPRSMSARAAGAKHDESTSAVRSASTASVTTGGRGTAAAGGTAAERIQSRCSSISTMPAAAPGPAGDDREPGATVATARLGIPDAVVTAAPWKWHQQPGLTKLQRPLWSTDSWASSRLMKVALATDASSGSFSAVSSETTSSTSPERHAEAHKKMPTETPDGVRIAAXXXXXXXAHTVVWPLPLNASTRASRPSGGKRHARLSARALASSPSAAKVRAEKKEARRTGSGSRRNWHHKKRAKKVTETESETLAPAASATAASGGRPPSSFLWREVGLQGTGSHSEAPDAPASAASASTTNDAGAHAAETGKRPRLERRTSSSATSRSRYSXXXXXXXXXXXXCSSSFDGNDNQRGAPAATVRSPPAFYEGNDSNG 770          
BLAST of Ec-28_003600.2 vs. uniprot
Match: A0A6H5JLD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD8_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.920e-24
Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0
Query:    1 MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTADLSAAVSGLAAALLTLFLCLN 61
            M APGFAALFEVA LGAALTVAS+VGSRFVVRWHQCSGTADLSAAVSGLA+ALLTLFL LN
Sbjct:    1 MSAPGFAALFEVATLGAALTVASIVGSRFVVRWHQCSGTADLSAAVSGLASALLTLFLSLN 61          
BLAST of Ec-28_003600.2 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.120e-12
Identity = 72/257 (28.02%), Postives = 116/257 (45.14%), Query Frame = 0
Query:   47 SGLAAALLTLFLCLNGLAYWFNGIGGYD--CLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPL-------RMPVAGAANGVRLF-------------------------SGGLKATGSCR--KCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYA 267
            +G  A++LT+F C+  L Y++  +   D  C  F  V     +ASNA+AF+HLF+ +++++  N  W  +R  G+ + V   + L+A+  TR+A    +    GE RC    + ++ A+KWV QLL  +  ++ F+ PL       R      A+  R F                         S     TGS R        V + +IS   S + TI VA +      G + + P+ A  +LDN   L AI++A
Sbjct:   34 TGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFK-VWIVMRTASNALAFLHLFLRADAVNAINPNWPPWRRFGIALLVATLIMLIAVAATRSARLVRNPPF-GE-RCEQSYEPVSFALKWVVQLLCHITFSLMFIYPLVDHMRAVRAAGLAVAHTPRSFLRRVLRRTVQKPSVTATENARAREDSNTAPVTGSMRGDTVYQRLVRRAVISLVASSLFTIAVAVMVFLDIFGAVSDMPLVAFAILDNGFTLGAIYFA 287          
The following BLAST results are available for this feature:
BLAST of Ec-28_003600.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTM0_ECTSI0.000e+087.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF49_9PHAE0.000e+069.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLD8_9PHAE1.920e-2491.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIT3_9STRA4.120e-1228.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..986
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..101
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 113..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3410736..3419232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003600.2Ec-28_003600.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3409784..3421674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003600.2 ID=Ec-28_003600.2|Name=Ec-28_003600.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=987bp
MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTADLSAAVSGLA
AALLTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFIL
SNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGES
RCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGG
LKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVF
AVEVLDNIVNLAAIFYAVHARPKFFHPRPKSLSQLLDSASSGNTSSSLMG
SFGGNVPFGGNASFGGSRSVGAYRGRRRSESSISADGRGYAEGRSARGDI
GGLGGSGYGSSSNVGGRLPRPHSIGVTSSTPSFSSFRASSLQRRYSSGPI
RRLPPVVDMSPESSGHGSLSRSSSNSRGQSPPPAVPSSNLPPKSEAPAAP
AAPSTILPLSSGTPSAAAGPLSSLLPASGTPFTAAAPSPSSPPPSRTPSV
VAGPSPSSPPLTGTPSVGPGPSPSSIASARTPGVAEVSPSSSRGTPYTAR
ARGAVEKGSGSGRYGRPVGALYFASRTTKNMRRTPGSSSSGTALGNADGA
VVNTGIAIARSMPPRSMSARAAGAKHDESTSAVRSASTASLTTGGGGTAA
AGGTAADRIPSRCSSISTMPAAAPELAGDDREPGAAVATSRLGIPDAVVT
AAPWKWHQQPGLTKLQRPLRSTNNWASSRLMKVALATDASSGSFSAVSSE
TTSSSSPERHAEAHKKMATETPDGVRIAAAAAAAAAAHTVVWPLPLNASS
RASPPSGGKRHARLSARTLASSPSAAKVRAEKKEARRTGSGSRRNWHHKK
RAKKVTETESETLITAASATAASGGRPPSSFLWREVGLQGTCSHPEAPDA
PASAASAATTNDVGAHAAETCKRPPLERRTSSSATNRSRYSAAAWSAFSA
ASWCSSSFDGNDNQRGAPAATVRSPASFYEGNDSNG*
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