Ec-28_003410.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003410.1
Unique NameEc-28_003410.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length323
Homology
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BLAST of Ec-28_003410.1 vs. uniprot
Match: D8LTN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN6_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 2.590e-180
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 
Query:    1 MRPTLALLSALLASLVHFPRAERVLLFRGGGPSGSPPSKTRATGSRGLSDDDDPPPIREVVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAGDIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAVVHXXXXXXXXXXXXXXXXXXXXXXXXXAGEAMTSGLDKLAEALTPPPSSKXXXXXXXXXTSRSRSQNNSIGNNANDAARTDRGKSGYGTGKXXXXXXKLGRGFWKEAFEKGEGWRSGLWGAEDDGGRWRTKKRDGXXXXXXRVRQERQRSRDDRDEQWWNMPIWSGVDDGRE 322
            MRPTLALLSALLASLVHFPRAERVLLFRGGGPSGSPPSKTRATGSRGLSDDDDPPPIREVVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAGDIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAVVHXXXXXXXXXXXXXXXXXXXXXXXXXAGEAMTSGLDKLAEALTPPPSSKXXXXXXXXXTSRSRSQNNSIGNNANDAARTDRGKSGYGTGKXXXXXXKLGRGFWKEAFEKGEGWRSGLWGAEDDGGRWRTKKRDGXXXXXXRVRQERQRSRDDRDEQWWNMPIWSGVDDGRE
Sbjct:    1 MRPTLALLSALLASLVHFPRAERVLLFRGGGPSGSPPSKTRATGSRGLSDDDDPPPIREVVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAGDIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAVVHXXXXXXXXXXXXXXXXXXXXXXXXXAGEAMTSGLDKLAEALTPPPSSKXXXXXXXXXTSRSRSQNNSIGNNANDAARTDRGKSGYGTGKXXXXXXKLGRGFWKEAFEKGEGWRSGLWGAEDDGGRWRTKKRDGXXXXXXRVRQERQRSRDDRDEQWWNMPIWSGVDDGRE 322
The following BLAST results are available for this feature:
BLAST of Ec-28_003410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTN6_ECTSI2.590e-180100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..322
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3235652..3238461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003410.1Ec-28_003410.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3235652..3238461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003410.1 ID=Ec-28_003410.1|Name=Ec-28_003410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=323bp
MRPTLALLSALLASLVHFPRAERVLLFRGGGPSGSPPSKTRATGSRGLSD
DDDPPPIREVVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAG
DIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAV
VHRATDGAKKAWRDFKQYDEAHGLTSRAGEAMTSGLDKLAEALTPPPSSK
PGGRRNSSSTSRSRSQNNSIGNNANDAARTDRGKSGYGTGKTGTGRDKLG
RGFWKEAFEKGEGWRSGLWGAEDDGGRWRTKKRDGGGGGSKRVRQERQRS
RDDRDEQWWNMPIWSGVDDGRE*
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