Ec-28_003270.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003270.2
Unique NameEc-28_003270.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length246
Homology
BLAST of Ec-28_003270.2 vs. uniprot
Match: D8LTQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 4.260e-122
Identity = 199/245 (81.22%), Postives = 209/245 (85.31%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 245
            M+S PRHQ SAPG EAAA R+DS+       +D  TEQ+HH D S L HDESSAI +LGSFVAGA VG ++CVR+FMFAP V +LLCGA             AAV TKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA
Sbjct:    1 MRSYPRHQVSAPGHEAAAVRNDSY-------LD--TEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTVVVLLCGA------------GAAVFTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 224          
BLAST of Ec-28_003270.2 vs. uniprot
Match: D8LTP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.580e-120
Identity = 200/247 (80.97%), Postives = 213/247 (86.23%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPP--IRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 245
            MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAG ISR  G +  DV LALFR VREFN  YQLT KV+ T QEAAGKV+ E+Q++GICD V TRA SLW+QVDKRTAPA QP   +  AQGQDTISL  EEPQ GFD+A DA +S  CS SSSE+EKT  ++L DA
Sbjct:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA 247          
BLAST of Ec-28_003270.2 vs. uniprot
Match: A0A6H5JUV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV7_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 3.610e-67
Identity = 127/193 (65.80%), Postives = 140/193 (72.54%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSK----------AGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQV 183
            M SDPRH+GSAPG EA A R+D +       +D  TEQ+HH D S L HDESSAI MLGSFVAGA +G +IC R+FMFAP+V +LLCGA             AAV T SDS+          AGQISR VGKWT DVFLALFRVVREFNYKYQL  KV+ITAQEAA KVKAEVQR+GICDGVKTRARSLWEQV
Sbjct:    1 MHSDPRHRGSAPGHEAVAVRNDPY-------LD--TEQEHHHDESTLAHDESSAIIMLGSFVAGALMGAIICARVFMFAPMVVVLLCGA------------GAAVFTNSDSEVGKFVVRLRWAGQISRGVGKWTSDVFLALFRVVREFNYKYQLADKVKITAQEAARKVKAEVQRIGICDGVKTRARSLWEQV 172          
BLAST of Ec-28_003270.2 vs. uniprot
Match: A0A6H5JZU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU5_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 4.360e-52
Identity = 101/117 (86.32%), Postives = 104/117 (88.89%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGQIS 117
            MQS+PRHQGSAPGSEAAANRDDS RHAKSFEVDNGTEQQH+RD SIL HDESSAITMLGSFVAGASVG MICVRLF+ APIVFLLLCGACVAV VV XXX  AAVVTKS SK   IS
Sbjct:    1 MQSNPRHQGSAPGSEAAANRDDSCRHAKSFEVDNGTEQQHNRDRSILAHDESSAITMLGSFVAGASVGAMICVRLFVLAPIVFLLLCGACVAVTVVLXXXAGAAVVTKSHSKVESIS 117          
BLAST of Ec-28_003270.2 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 3.370e-47
Identity = 101/208 (48.56%), Postives = 138/208 (66.35%), Query Frame = 0
Query:   38 QQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 245
            +Q H++  ++ HDE+S I + GSF+AGA VG +IC      AP   +LL GA             AA +TKSDSK G+ SR+VGK + D+ LA+FR+ RE+N+K++LT K ++ A+EAAGKV  ++++LGI D VK RA SLW+QVDKRTAPAGQ  I+AAQGQD +S + +  Q+ FD A DA  + S SSSS    K  + + FDA
Sbjct:   38 EQPHQE--VIAHDEASGIIVFGSFIAGALVGVVIC------APAFVVLLFGA------------GAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQD-LSQVTDGTQIPFDGAVDAYVTDSSSSSSYS--KGRKPKSFDA 222          
BLAST of Ec-28_003270.2 vs. uniprot
Match: A0A6H5JV13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV13_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.030e-21
Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 0
Query:  112 KAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDK 185
            K G ISR  G +T DV LAL RVVRE N   QL+ KV++T QEAA KV+AE+Q++GICD V TRARSLW+QVDK
Sbjct:   20 KVGTISRRAGNFTSDVLLALLRVVREINRTCQLSDKVKVTVQEAARKVQAEMQKVGICDHVMTRARSLWDQVDK 93          
The following BLAST results are available for this feature:
BLAST of Ec-28_003270.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LTQ0_ECTSI4.260e-12281.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTP9_ECTSI1.580e-12080.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUV7_9PHAE3.610e-6765.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU5_9PHAE4.360e-5286.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP8_ECTSI3.370e-4748.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JV13_9PHAE1.030e-2164.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3080028..3089831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003270.2Ec-28_003270.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3078213..3089912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003270.2 ID=Ec-28_003270.2|Name=Ec-28_003270.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=246bp
MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHD
ESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVLLCG
AGAAVVTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRI
TAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQG
QDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA*
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