Ec-28_003250.3 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003250.3
Unique NameEc-28_003250.3
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length232
Homology
BLAST of Ec-28_003250.3 vs. uniprot
Match: D8LTQ1_ECTSI (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ1_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 5.160e-152
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
Query:    9 QRHASGWNTLALSVAGLSRPFFAFGLSRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            +RHASGWNTLALSVAGLSRPFFAFGLSRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI
Sbjct:   14 KRHASGWNTLALSVAGLSRPFFAFGLSRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236          
BLAST of Ec-28_003250.3 vs. uniprot
Match: A0A6H5KSS9_9PHAE (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSS9_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 1.510e-128
Identity = 193/196 (98.47%), Postives = 193/196 (98.47%), Query Frame = 0
Query:   36 RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            RTLWRNEV APELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLAT DGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVL GRVDLI
Sbjct:   41 RTLWRNEVCAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLEGRVDLI 236          
BLAST of Ec-28_003250.3 vs. uniprot
Match: A0A7S1CA29_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA29_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.150e-43
Identity = 84/190 (44.21%), Postives = 126/190 (66.32%), Query Frame = 0
Query:   41 NEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDL 230
            NE ++PELL  +  LV DL+     Q E++ DARA+  EAF+ASLYQME+DR+++ +S YLRTRL K++R A+H+L T   EM  R+S  E     GYVD LE HF ++ +  +P+ +R LT++S+  +MV+ PN DT V CR  +DVG  Q+ + A  E  S+ +  G+ F+V++  +R+LV  G+V+L
Sbjct:   81 NEKTSPELLPYEADLVQDLVDATTQQSEVIADARATTAEAFAASLYQMEIDRVKFLVSSYLRTRLFKIQRYAVHLLRT--SEMHARMSPEEERFTVGYVDALEQHFHKSFMDAVPAKYRGLTDSSKRTDMVRRPNADTHVFCRVVEDVGDHQLDDDAFAEPLSLSI--GNAFVVKFSSVRSLVEAGKVEL 266          
BLAST of Ec-28_003250.3 vs. uniprot
Match: A0A6A3MJ49_9STRA (DNA replication complex GINS protein SLD5 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MJ49_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.120e-41
Identity = 83/201 (41.29%), Postives = 129/201 (64.18%), Query Frame = 0
Query:   36 RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            R LW NE++APE+L+ +E +V+++++Q+ NQQE VD      A+ + E++F   LYQME+DRLRY++S YLRTRLRK+E+ A+ +L+  D  +  RLS +ER  A+ +V + E H     L++    +RSLT    +E MV EPNLD+FV C  ++    VQ+ E  G     + + Q D +++RYR I++ V  G++ LI
Sbjct:   30 RILWVNELNAPEILRYNEEMVAEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYTVSSYLRTRLRKIEKFAIQILS--DPTLTQRLSLKERNFAQQFVMLFESHVNELALNKFNQEYRSLT----DEGMVSEPNLDSFVFCEGKEGAEAVQVDEKGG---DFVQMHQADRYVLRYRSIKSQVESGKIGLI 221          
BLAST of Ec-28_003250.3 vs. uniprot
Match: UPI001CB8EF1B (DNA replication complex GINS protein SLD5 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8EF1B)

HSP 1 Score: 145 bits (367), Expect = 6.710e-40
Identity = 78/201 (38.81%), Postives = 130/201 (64.68%), Query Frame = 0
Query:   34 LSRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRS---LTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            L +  WRNE +APE+L+ +  LV    +Q++  +E V+D   S E+  + SLYQM++DR  + L  YLRTRL+K+E+  L++  T D     RLS +E+++AK  +  L  HF ++ LS++P  ++S    ++ S+E++MV EP LD FV+CR R  +G + + ++   EE+ +D+  GD++ VRY+PI+ LV  G++DL+
Sbjct:   25 LLKRCWRNEKAAPEILQYESSLVRRTAEQIQLMEETVEDLMNSGEDPLTVSLYQMDIDRTLFLLRSYLRTRLQKIEKFMLYIQKTAD--QWTRLSSQEQDYAKDSIKNLSQHFEQSVLSKLPDRYKSHLKQSDISEEDDMVPEPKLDAFVICRTRKFLGALPVDDSG--EENPLDMYAGDIYAVRYKPIKLLVESGQLDLV 221          
BLAST of Ec-28_003250.3 vs. uniprot
Match: A0A8K1CTT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTT8_PYTOL)

HSP 1 Score: 144 bits (364), Expect = 1.600e-39
Identity = 87/201 (43.28%), Postives = 127/201 (63.18%), Query Frame = 0
Query:   36 RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            +TLW NE++APE+L  D+ +V++++ Q++NQQE VD      A  + E AF   LYQME+DRL+Y +S YLRTRLRK E+ A H+L   D  +  RLS +E + AK YV + ++H +   L++ P   RSLT     E MV EP+LD+FV C +++ +G +Q  +  G E  SM   QGD  +VRYR ++  V  G+V L+
Sbjct:   24 QTLWLNEINAPEILPYDDEMVAEMLDQIKNQQEYVDSVSEDKAALTEERAFINKLYQMEIDRLKYMVSSYLRTRLRKTEKFAQHILN--DPVLTQRLSQKEIQFAKQYVMLFDNHVSELALARFPDEHRSLT----AEGMVVEPDLDSFVFCESKESLGQLQCDDN-GVEYISM--HQGDRHVVRYRSVKNHVEEGQVGLL 215          
BLAST of Ec-28_003250.3 vs. uniprot
Match: A0A5D6XTN8_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTN8_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.040e-39
Identity = 89/201 (44.28%), Postives = 122/201 (60.70%), Query Frame = 0
Query:   36 RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVD----DARASPEE-AFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            R LW NE++APELL  D+ +V++++ Q+ NQQE VD    D  A  EE AF   LYQME+DRLRY ++ YLRTRLRK+E+ ALH+L+  D  +  RLS +E   AK YV + E H T   L +     RS+T     E MV EP++D FV C +R  +G +Q  +   R    + +RQGD  ++RYR ++  V  G V LI
Sbjct:   28 RVLWVNEMNAPELLPYDDEMVAEMLDQIRNQQEYVDSVSEDKEALTEERAFVNKLYQMEIDRLRYMVASYLRTRLRKIEKFALHLLS--DPALSQRLSQKELAFAKQYVVLFESHVTELALGKFADEHRSIT----AEGMVVEPDVDKFVFCESRAALGQLQCDD---RGAEYITMRQGDRHVLRYRAVKAQVEDGSVALI 219          
BLAST of Ec-28_003250.3 vs. uniprot
Match: A0A8J5IXW6_9STRA (DNA replication complex GINS protein SLD5 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5IXW6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.840e-39
Identity = 84/201 (41.79%), Postives = 125/201 (62.19%), Query Frame = 0
Query:   36 RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            RTLW NE++APE+L+ DE +VS++++Q+ NQQE VD      A+ + E++F   LYQME+DRLRY +S YLRTRL K+E+ A+H+L+  D  +  RLS +ER  A+ +V + E H     L +     R+LT     E MV EPNLD+FV C+ ++  G VQ  +  G     + +   D +++RYR ++  V  G +DLI
Sbjct:   22 RTLWVNELNAPEILQYDEEMVSEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYMVSSYLRTRLHKIEKFAIHILS--DAVLTQRLSVKERNFAQQFVMLFESHVNDLALGKFTKENRTLT----AEGMVPEPNLDSFVFCQGKE-AGGVQCDDKGG---DFVQVTSADRYVLRYRSVQEHVQAGTIDLI 212          
BLAST of Ec-28_003250.3 vs. uniprot
Match: K3X7K8_GLOUD (DNA replication complex GINS protein SLD5 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K8_GLOUD)

HSP 1 Score: 142 bits (357), Expect = 1.840e-38
Identity = 85/201 (42.29%), Postives = 121/201 (60.20%), Query Frame = 0
Query:   36 RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARA-----SPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            R LW NE++APE+L  DE +VS+++ Q+ NQQE VD         + E AF   LYQME+DRL+Y +S YLRTRLRK+E+ ALH+L+  D  +  RLS +E   AK YV + E H     L +     RS+T+    E M+ EP+LDTFV C ++  +G +Q  +   R    + +R+ D  ++RYR ++T V  G V LI
Sbjct:   25 RALWINEMNAPEILPYDEEIVSEMLDQIRNQQEYVDSVSEDKDSLTEERAFVNKLYQMEIDRLQYMVSSYLRTRLRKIEKFALHLLS--DAVLSQRLSQKELNFAKQYVVLFETHVNDLALGKFAEEHRSITS----EGMIVEPDLDTFVFCESKTVLGQLQCDD---RGAEYITMRKSDRHVLRYRAVKTQVEDGSVALI 216          
BLAST of Ec-28_003250.3 vs. uniprot
Match: A0A024TMS8_9STRA (DNA replication complex GINS protein SLD5 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMS8_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.030e-38
Identity = 81/203 (39.90%), Postives = 123/203 (60.59%), Query Frame = 0
Query:   34 LSRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARA-----SPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 231
            L R  W NE++APELL     L+SD+++QV+NQQ  VDD  A     + E +F+  LYQME+DR++Y L+ YLR RLRK+E+  +HVL     E   ++S  E ++A  + D+ E H     LS++P+  + L     E +M+  PNLD FV C+  +D+G VQI +   R    ++ R+ D  ++RYR +R+LV  G+V L+
Sbjct:   16 LLRDAWVNELNAPELLSFQTDLISDMVEQVQNQQSYVDDMSADVATLTEERSFTNKLYQMEIDRIKYMLASYLRIRLRKIEQHTMHVL----NESLDKMSRGEIDYAHSFKDLYESHCRDLLLSRLPNEHQQL----DEPHMIDHPNLDAFVFCQTVEDIGNVQIDD---RGSEHVNARKNDRHVLRYRVVRSLVEEGKVTLL 207          
The following BLAST results are available for this feature:
BLAST of Ec-28_003250.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTQ1_ECTSI5.160e-15299.55DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A6H5KSS9_9PHAE1.510e-12898.47DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A7S1CA29_9STRA2.150e-4344.21DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A6A3MJ49_9STRA2.120e-4141.29DNA replication complex GINS protein SLD5 n=4 Tax=... [more]
UPI001CB8EF1B6.710e-4038.81DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A8K1CTT8_PYTOL1.600e-3943.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XTN8_9STRA5.040e-3944.28DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A8J5IXW6_9STRA5.840e-3941.79DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
K3X7K8_GLOUD1.840e-3842.29DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A024TMS8_9STRA8.030e-3839.90DNA replication complex GINS protein SLD5 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableGENE3D1.20.58.1030coord: 35..221
e-value: 1.6E-52
score: 180.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..33
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 175..231
IPR008591GINS complex subunit Sld5PIRSFPIRSF007764GINS_Sld5coord: 30..231
e-value: 9.2E-43
score: 144.5
IPR008591GINS complex subunit Sld5PANTHERPTHR21206SLD5 PROTEINcoord: 37..231
IPR031633DNA replication complex GINS protein SLD5, C-terminalPFAMPF16922SLD5_Ccoord: 174..231
e-value: 6.3E-16
score: 58.3
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 37..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3075153..3078325 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003250.3Ec-28_003250.3Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3071243..3078607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003250.3 ID=Ec-28_003250.3|Name=Ec-28_003250.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=232bp
MSYNYSRRQRHASGWNTLALSVAGLSRPFFAFGLSRTLWRNEVSAPELLK
VDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKY
LRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTC
LSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGRE
ESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008591GINS_Sld5
IPR031633SLD5_C
IPR036224GINS_bundle-like_dom_sf