Ec-28_003250.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003250.2
Unique NameEc-28_003250.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length237
Homology
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A6H5KSS9_9PHAE (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSS9_9PHAE)

HSP 1 Score: 444 bits (1142), Expect = 2.920e-157
Identity = 231/236 (97.88%), Postives = 233/236 (98.73%), Query Frame = 0
Query:    1 MEDEIASEAGPQDKDTLFDLKNGGTEPLDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
            M+DEIASEAGPQDKDTLFDL+NGGTEPLDDSDLNEDVAKLRTLWRNEV APELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLAT DGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVL GRVDLI
Sbjct:    1 MDDEIASEAGPQDKDTLFDLENGGTEPLDDSDLNEDVAKLRTLWRNEVCAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLEGRVDLI 236          
BLAST of Ec-28_003250.2 vs. uniprot
Match: D8LTQ1_ECTSI (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ1_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 4.450e-136
Identity = 215/242 (88.84%), Postives = 218/242 (90.08%), Query Frame = 0
Query:    1 MEDEIASEAGPQDK------DTLFDLKNGGTEPLDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
            MEDEIASEAGPQDK      +TL     G + P     L+      RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI
Sbjct:    1 MEDEIASEAGPQDKRHASGWNTLALSVAGLSRPFFAFGLS------RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236          
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A7S1CA29_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA29_9STRA)

HSP 1 Score: 165 bits (417), Expect = 9.080e-47
Identity = 97/240 (40.42%), Postives = 145/240 (60.42%), Query Frame = 0
Query:    2 EDEIASEAGPQDKDTLFDLKNGGTE------PLDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDL 235
            +DE   E G  D   L DL   G           DS  N D+ +++  + NE ++PELL  +  LV DL+     Q E++ DARA+  EAF+ASLYQME+DR+++ +S YLRTRL K++R A+H+L T   EM  R+S  E     GYVD LE HF ++ +  +P+ +R LT++S+  +MV+ PN DT V CR  +DVG  Q+ + A  E  S+ +  G+ F+V++  +R+LV  G+V+L
Sbjct:   31 DDEDVGELGADDLAFLSDLTGAGRGGAGAGISASDSLRNMDIVRIKRAFLNEKTSPELLPYEADLVQDLVDATTQQSEVIADARATTAEAFAASLYQMEIDRVKFLVSSYLRTRLFKIQRYAVHLLRT--SEMHARMSPEEERFTVGYVDALEQHFHKSFMDAVPAKYRGLTDSSKRTDMVRRPNADTHVFCRVVEDVGDHQLDDDAFAEPLSLSI--GNAFVVKFSSVRSLVEAGKVEL 266          
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A6A3MJ49_9STRA (DNA replication complex GINS protein SLD5 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MJ49_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.550e-45
Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = 0
Query:   28 LDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
             D  +LNEDV  +R LW NE++APE+L+ +E +V+++++Q+ NQQE VD      A+ + E++F   LYQME+DRLRY++S YLRTRLRK+E+ A+ +L+  D  +  RLS +ER  A+ +V + E H     L++    +RSLT    +E MV EPNLD+FV C  ++    VQ+ E  G     + + Q D +++RYR I++ V  G++ LI
Sbjct:   17 FDRDNLNEDVVNMRILWVNELNAPEILRYNEEMVAEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYTVSSYLRTRLRKIEKFAIQILS--DPTLTQRLSLKERNFAQQFVMLFESHVNELALNKFNQEYRSLT----DEGMVSEPNLDSFVFCEGKEGAEAVQVDEKGG---DFVQMHQADRYVLRYRSIKSQVESGKIGLI 221          
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A8K1CTT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTT8_PYTOL)

HSP 1 Score: 159 bits (401), Expect = 5.210e-45
Identity = 96/224 (42.86%), Postives = 139/224 (62.05%), Query Frame = 0
Query:   18 FDLKNGGTEPLDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
             D   G T   D  +LNEDV +++TLW NE++APE+L  D+ +V++++ Q++NQQE VD      A  + E AF   LYQME+DRL+Y +S YLRTRLRK E+ A H+L   D  +  RLS +E + AK YV + ++H +   L++ P   RSLT     E MV EP+LD+FV C +++ +G +Q  +  G E  SM   QGD  +VRYR ++  V  G+V L+
Sbjct:    1 MDDSQGMTSDFDRENLNEDVERMQTLWLNEINAPEILPYDDEMVAEMLDQIKNQQEYVDSVSEDKAALTEERAFINKLYQMEIDRLKYMVSSYLRTRLRKTEKFAQHILN--DPVLTQRLSQKEIQFAKQYVMLFDNHVSELALARFPDEHRSLT----AEGMVVEPDLDSFVFCESKESLGQLQCDDN-GVEYISM--HQGDRHVVRYRSVKNHVEEGQVGLL 215          
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A8J5IXW6_9STRA (DNA replication complex GINS protein SLD5 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5IXW6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.520e-43
Identity = 90/214 (42.06%), Postives = 134/214 (62.62%), Query Frame = 0
Query:   28 LDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
             D  +LNEDV ++RTLW NE++APE+L+ DE +VS++++Q+ NQQE VD      A+ + E++F   LYQME+DRLRY +S YLRTRL K+E+ A+H+L+  D  +  RLS +ER  A+ +V + E H     L +     R+LT     E MV EPNLD+FV C+ ++  G VQ  +  G     + +   D +++RYR ++  V  G +DLI
Sbjct:    9 FDQENLNEDVQRMRTLWVNELNAPEILQYDEEMVSEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYMVSSYLRTRLHKIEKFAIHILS--DAVLTQRLSVKERNFAQQFVMLFESHVNDLALGKFTKENRTLT----AEGMVPEPNLDSFVFCQGKE-AGGVQCDDKGG---DFVQVTSADRYVLRYRSVQEHVQAGTIDLI 212          
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A5D6XTN8_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTN8_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.630e-43
Identity = 95/214 (44.39%), Postives = 131/214 (61.21%), Query Frame = 0
Query:   28 LDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVD----DARASPEE-AFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
             D  +LNEDV ++R LW NE++APELL  D+ +V++++ Q+ NQQE VD    D  A  EE AF   LYQME+DRLRY ++ YLRTRLRK+E+ ALH+L+  D  +  RLS +E   AK YV + E H T   L +     RS+T     E MV EP++D FV C +R  +G +Q  +   R    + +RQGD  ++RYR ++  V  G V LI
Sbjct:   15 FDHENLNEDVNRMRVLWVNEMNAPELLPYDDEMVAEMLDQIRNQQEYVDSVSEDKEALTEERAFVNKLYQMEIDRLRYMVASYLRTRLRKIEKFALHLLS--DPALSQRLSQKELAFAKQYVVLFESHVTELALGKFADEHRSIT----AEGMVVEPDVDKFVFCESRAALGQLQCDD---RGAEYITMRQGDRHVLRYRAVKAQVEDGSVALI 219          
BLAST of Ec-28_003250.2 vs. uniprot
Match: K3X7K8_GLOUD (DNA replication complex GINS protein SLD5 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K8_GLOUD)

HSP 1 Score: 154 bits (389), Expect = 3.410e-43
Identity = 91/214 (42.52%), Postives = 130/214 (60.75%), Query Frame = 0
Query:   28 LDDSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARA-----SPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
             D  +LNEDV ++R LW NE++APE+L  DE +VS+++ Q+ NQQE VD         + E AF   LYQME+DRL+Y +S YLRTRLRK+E+ ALH+L+  D  +  RLS +E   AK YV + E H     L +     RS+T+    E M+ EP+LDTFV C ++  +G +Q  +   R    + +R+ D  ++RYR ++T V  G V LI
Sbjct:   12 FDQENLNEDVTRMRALWINEMNAPEILPYDEEIVSEMLDQIRNQQEYVDSVSEDKDSLTEERAFVNKLYQMEIDRLQYMVSSYLRTRLRKIEKFALHLLS--DAVLSQRLSQKELNFAKQYVVLFETHVNDLALGKFAEEHRSITS----EGMIVEPDLDTFVFCESKTVLGQLQCDD---RGAEYITMRKSDRHVLRYRAVKTQVEDGSVALI 216          
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A024TMS8_9STRA (DNA replication complex GINS protein SLD5 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMS8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 5.910e-42
Identity = 87/212 (41.04%), Postives = 131/212 (61.79%), Query Frame = 0
Query:   30 DSDLNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARA-----SPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
            + +LNEDVA LR  W NE++APELL     L+SD+++QV+NQQ  VDD  A     + E +F+  LYQME+DR++Y L+ YLR RLRK+E+  +HVL     E   ++S  E ++A  + D+ E H     LS++P+  + L     E +M+  PNLD FV C+  +D+G VQI +   R    ++ R+ D  ++RYR +R+LV  G+V L+
Sbjct:    7 EENLNEDVALLRDAWVNELNAPELLSFQTDLISDMVEQVQNQQSYVDDMSADVATLTEERSFTNKLYQMEIDRIKYMLASYLRIRLRKIEQHTMHVL----NESLDKMSRGEIDYAHSFKDLYESHCRDLLLSRLPNEHQQL----DEPHMIDHPNLDAFVFCQTVEDIGNVQIDD---RGSEHVNARKNDRHVLRYRVVRSLVEEGKVTLL 207          
BLAST of Ec-28_003250.2 vs. uniprot
Match: A0A7S2C5M9_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5M9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.150e-41
Identity = 83/204 (40.69%), Postives = 127/204 (62.25%), Query Frame = 0
Query:   33 LNEDVAKLRTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236
            LNED+ KLR  W  E + P++   DE L +D+ +Q++NQQ  +D      +EAF+ASLYQME+DR+++SL++YLRTRL KVE   LH+LA+   E + +LS  E ++A+ Y  ++++HFT   L ++P  FR         + ++ PN DT+V CR ++D+G VQ+       +S   L  GD+ ++RY PI+ LV    V LI
Sbjct:    9 LNEDIGKLRNAWVAESTCPDIRPFDEDLFADVSEQIQNQQAFIDKTVTETDEAFTASLYQMEIDRVKFSLARYLRTRLLKVESQVLHILASP--EQKAKLSPAELDYAEKYERLVKEHFTHCVLDELPEPFRKFGEADDAGDALR-PNQDTYVFCRIKEDLGEVQLDHTM---DSRTPLNAGDLQVLRYLPIQALVENDEVVLI 206          
The following BLAST results are available for this feature:
BLAST of Ec-28_003250.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSS9_9PHAE2.920e-15797.88DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
D8LTQ1_ECTSI4.450e-13688.84DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A7S1CA29_9STRA9.080e-4740.42DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A6A3MJ49_9STRA1.550e-4541.59DNA replication complex GINS protein SLD5 n=4 Tax=... [more]
A0A8K1CTT8_PYTOL5.210e-4542.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8J5IXW6_9STRA1.520e-4342.06DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
A0A5D6XTN8_9STRA2.630e-4344.39DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
K3X7K8_GLOUD3.410e-4342.52DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A024TMS8_9STRA5.910e-4241.04DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
A0A7S2C5M9_9STRA1.150e-4140.69DNA replication complex GINS protein SLD5 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableGENE3D1.20.58.1030coord: 27..226
e-value: 2.4E-55
score: 189.4
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 180..236
IPR008591GINS complex subunit Sld5PIRSFPIRSF007764GINS_Sld5coord: 12..236
e-value: 1.3E-44
score: 150.5
IPR008591GINS complex subunit Sld5PANTHERPTHR21206SLD5 PROTEINcoord: 31..236
IPR031633DNA replication complex GINS protein SLD5, C-terminalPFAMPF16922SLD5_Ccoord: 179..236
e-value: 6.6E-16
score: 58.3
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 34..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3073421..3078325 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003250.2Ec-28_003250.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3071243..3078607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003250.2 ID=Ec-28_003250.2|Name=Ec-28_003250.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=237bp
MEDEIASEAGPQDKDTLFDLKNGGTEPLDDSDLNEDVAKLRTLWRNEVSA
PELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRY
SLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDH
FTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGE
AAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008591GINS_Sld5
IPR031633SLD5_C
IPR036224GINS_bundle-like_dom_sf