Ec-28_003150.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003150.1
Unique NameEc-28_003150.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length847
Homology
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BLAST of Ec-28_003150.1 vs. uniprot
Match: D8LTR1_ECTSI (Kinesin light chain-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR1_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 9.360e-188
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0 
Query:    1 MDHSPIAFVCAVAVTAGLVSTSSVEAGSTGNHIIVSAPAWVSPRTAVVPPAGGQRDGALRQLVWTTSTTSARSDGCEATPSSPQGGGAFCRENPLWTKHESAMWVRGGASDGXXXXXXXXXPSGKKAVKPGSPSKVAAEKSGPARGGGGAGGVWASVARAWRAVRGGRPHNHGSNTGATSAVADPKASSGGGSHNSKVXXXXXXXRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSFPREGTGGERQQQRAPYSTSNRRNVYGAAAASSPHWQPQPQRTPGSFVVSSAERERREVEVRDALVRAEGEVGGEHPRVATLLFLLSRIVQERGDYTEAEELCTRALSIYEA 360
            MDHSPIAFVCAVAVTAGLVSTSSVEAGSTGNHIIVSAPAWVSPRTAVVPPAGGQRDGALRQLVWTTSTTSARSDGCEATPSSPQGGGAFCRENPLWTKHESAMWVRGGASDGXXXXXXXXXPSGKKAVKPGSPSKVAAEKSGPARGGGGAGGVWASVARAWRAVRGGRPHNHGSNTGATSAVADPKASSGGGSHNSKVXXXXXXXRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSFPREGTGGERQQQRAPYSTSNRRNVYGAAAASSPHWQPQPQRTPGSFVVSSAERERREVEVRDALVRAEGEVGGEHPRVATLLFLLSRIVQERGDYTEAEELCTRALSIYEA
Sbjct:    1 MDHSPIAFVCAVAVTAGLVSTSSVEAGSTGNHIIVSAPAWVSPRTAVVPPAGGQRDGALRQLVWTTSTTSARSDGCEATPSSPQGGGAFCRENPLWTKHESAMWVRGGASDGXXXXXXXXXPSGKKAVKPGSPSKVAAEKSGPARGGGGAGGVWASVARAWRAVRGGRPHNHGSNTGATSAVADPKASSGGGSHNSKVXXXXXXXRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSFPREGTGGERQQQRAPYSTSNRRNVYGAAAASSPHWQPQPQRTPGSFVVSSAERERREVEVRDALVRAEGEVGGEHPRVATLLFLLSRIVQERGDYTEAEELCTRALSIYEA 360
The following BLAST results are available for this feature:
BLAST of Ec-28_003150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTR1_ECTSI9.360e-188100.00Kinesin light chain-like protein n=2 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 494..514
score: 59.52
coord: 529..550
score: 33.64
coord: 385..403
score: 35.79
coord: 450..467
score: 54.44
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 622..655
e-value: 0.052
score: 22.7
coord: 748..781
e-value: 290.0
score: 2.1
coord: 538..571
e-value: 9.9
score: 15.0
coord: 580..613
e-value: 11.0
score: 14.6
coord: 664..697
e-value: 0.1
score: 21.7
coord: 328..361
e-value: 22.0
score: 12.0
coord: 496..529
e-value: 82.0
score: 6.9
coord: 790..823
e-value: 150.0
score: 4.7
coord: 412..445
e-value: 0.45
score: 19.6
coord: 706..739
e-value: 86.0
score: 6.8
coord: 370..403
e-value: 2.6
score: 17.0
coord: 454..487
e-value: 0.0029
score: 26.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 622..655
score: 8.054
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 412..445
score: 7.877
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 328..361
score: 6.874
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 664..697
score: 6.874
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 454..487
score: 7.936
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 496..529
score: 5.458
NoneNo IPR availablePFAMPF13374TPR_10coord: 334..368
e-value: 2.6E-8
score: 33.5
coord: 372..409
e-value: 3.6E-5
score: 23.5
NoneNo IPR availablePFAMPF13424TPR_12coord: 415..485
e-value: 4.5E-17
score: 62.1
coord: 495..570
e-value: 1.3E-17
score: 63.8
coord: 752..821
e-value: 7.1E-13
score: 48.7
coord: 579..653
e-value: 8.2E-17
score: 61.3
coord: 663..737
e-value: 1.7E-19
score: 69.9
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 485..611
coord: 534..688
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 659..831
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 310..408
coord: 396..536
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 310..408
coord: 396..536
coord: 659..831
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 485..611
coord: 534..688
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..846
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.574
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 296..418
e-value: 2.2E-23
score: 85.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 424..565
e-value: 4.0E-45
score: 156.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 656..836
e-value: 3.1E-57
score: 195.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 612..655
e-value: 1.6E-10
score: 42.8
coord: 566..611
e-value: 7.3E-9
score: 37.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 700..835
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 616..737
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 451..693
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 321..443
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 328..697
score: 21.286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2964665..2972971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003150.1Ec-28_003150.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2964665..2972971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003150.1 ID=Ec-28_003150.1|Name=Ec-28_003150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=847bp
MDHSPIAFVCAVAVTAGLVSTSSVEAGSTGNHIIVSAPAWVSPRTAVVPP
AGGQRDGALRQLVWTTSTTSARSDGCEATPSSPQGGGAFCRENPLWTKHE
SAMWVRGGASDGGGANGGGADPSGKKAVKPGSPSKVAAEKSGPARGGGGA
GGVWASVARAWRAVRGGRPHNHGSNTGATSAVADPKASSGGGSHNSKVGG
GAATSRDAGEETGSSGASPSGSGSGATTRSGKASSSRRTKRNSSKKRSFP
REGTGGERQQQRAPYSTSNRRNVYGAAAASSPHWQPQPQRTPGSFVVSSA
ERERREVEVRDALVRAEGEVGGEHPRVATLLFLLSRIVQERGDYTEAEEL
CTRALSIYEAALGPEHPDVGVALNCLAMSWQAQGKLMEAEPLHKRALDIA
RSTTGPGHPTAAYSLHGLAVLAQARGRFDEAETLFREALGINERAHGNRH
PEVASCLNSLAALLQARGSYDEAEILFTRALEVDEACFGLEHPRVAAGLH
NLAALLQAQGKHEEADRLQSRALKTWEREYGPEHPKLAAFLNNQATLRLA
QGKPDEAEKLGLRALSIVEKAYGPVHPEIATCLNNLSALLHARRRDDEAE
PLCRRALQISEQIYGSNHPKIATCLNNLATQVQARGEFEEAEEMFTRALD
IGRQMYGPSHPNVATGLSNLAGLLRCQGKLDEAEPLYRKAVEIGETVLGP
DHPDLATWLNNLATLVRDRGDPDAAEPLQRRALAIGEKVLGPAHPDLGAQ
VINLASLLSAQGKTEEAERLFIRGLATLEAAHGPEHPDVAAVLSHYASML
HQEGRDAEAKELIKRALATVERFFGPSHPIAVQLRAILEPGGWGAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom