Ec-28_003140.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003140.1
Unique NameEc-28_003140.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length244
Homology
BLAST of Ec-28_003140.1 vs. uniprot
Match: D8LTR2_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR2_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 1.840e-168
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
Query:    1 MFQGVNGFGGGGSKASSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFWQANEKKTDGQAAQALLPGFLRNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLILQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCLSRGGS 243
            MFQGVNGFGGGGSKASSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFWQANEKKTDGQAAQALLPGFLRNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLILQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCLSRGGS
Sbjct:    1 MFQGVNGFGGGGSKASSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFWQANEKKTDGQAAQALLPGFLRNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLILQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCLSRGGS 243          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A835Z9B9_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B9_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.860e-60
Identity = 118/237 (49.79%), Postives = 154/237 (64.98%), Query Frame = 0
Query:   12 GSKASSGFGQWYLDMQD--AKEEE---TGDVEDGSAPGWRF------WQANEKKTDGQAAQALLPGFLRN-EAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLILQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCF 236
            G     GFG W+   Q   AKE+     G    G+  G R+      W    ++TDGQ+   LLP F         + D+VI+G+SY QRFKGFV +LLLS  FFVLAF +GLP+++LRPHKFAL FTLGS  FM SFAML+GP  H+  +   +RLPFT  YV SM  TL+ACL+++SY +V   SV+Q L+LAW+F++ VPGGS G++Y L AI KTA+YT++PCI GC   +CF
Sbjct:    6 GQNTGVGFGDWFEQHQAQVAKEQNGNGNGSEATGAELGSRWNNLVPTWA---ERTDGQS---LLPNFFSGANTQKTEADSVILGLSYAQRFKGFVATLLLSAVFFVLAFFVGLPVVVLRPHKFALCFTLGSLCFMASFAMLRGPSEHIAMLCRSERLPFTALYVVSMLGTLHACLVMRSYFLVAVFSVLQGLSLAWFFVAMVPGGSGGLKYVLGAIAKTAQYTIMPCIHGCG--MCF 234          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A7S2ATY9_9STRA (Vesicle transport protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATY9_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.770e-53
Identity = 111/247 (44.94%), Postives = 147/247 (59.51%), Query Frame = 0
Query:   15 ASSGFGQWYLDMQDAKEEETGDVEDGSAPGW----RFWQA-NEKKTD------------------GQAAQALLPGFLRNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLILQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCL 238
            AS GFG+W+  +Q  + +    V +     W      W + +EKK D                  G      L G    +A  PDT  ++MG+SY+ RFKGFV  + LS  FF+L+F IGLP+IM RPHKFAL FTLGS  FM SFA+LKGP+ HLKSM  +DRL F+VAY+ SM ATLYA L+++SY++VV  S  Q   L +Y +SF+PGG+ G+R F+SA  +TAR  + PCI G    L  C+
Sbjct:    2 ASGGFGEWFEKVQQDESKNENSVPNDPDSLWGNVNNLWSSGSEKKRDMDPESQSFLDAPTNFFKSGLTGLNSLAGGSPEDAKEPDT--MLMGLSYKTRFKGFVACIALSGVFFILSFAIGLPVIMFRPHKFALCFTLGSITFMSSFALLKGPMTHLKSMFTKDRLQFSVAYLASMFATLYAALVIRSYILVVITSGFQFSTLGYYMVSFIPGGATGLRLFMSAFIRTARMIIGPCIAGMCGLLKCCM 246          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A7S2U6T7_9STRA (Vesicle transport protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6T7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.590e-43
Identity = 109/248 (43.95%), Postives = 135/248 (54.44%), Query Frame = 0
Query:   15 ASSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFW--QANEKKTDGQAA------QALLPGFLRN----------EAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLIL---QSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLL-PCIEGCRKTLCFCLSR 240
            +S+ FG WY   Q  + +       G +    F    A EKKTDG         QA L G   N          EA  P     IMGM+YQQRF+ F   L+LS  FF L F +GLPMI +RP KFAL+FT GS  FM SF +LKGP AH   MLAR+RLPFT  Y+GSM  TLY          Y++V+  S  QL+AL WY ++F+PGG+ GMR    A+     YTLL P I+GC K    CL++
Sbjct:    2 SSNSFGDWYAQQQ--QPQSGSPASSGFSINGLFGGSSAEEKKTDGDVELGNGDEQAPLFGGTENLNFSNLRAGLEAQLPQK---IMGMNYQQRFQVFCGMLILSALFFALGFFVGLPMITVRPQKFALSFTFGSLLFMSSFGILKGPWAHFSGMLARERLPFTTMYIGSMFLTLYLTFNAGGASGYVLVLGASACQLMALMWYLITFLPGGAAGMRVLTQAM-----YTLLKPIIKGCAKVQGMCLAK 239          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A7S0AJZ3_9STRA (Vesicle transport protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AJZ3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.890e-43
Identity = 80/149 (53.69%), Postives = 106/149 (71.14%), Query Frame = 0
Query:   81 IMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLIL---QSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPC 226
            +MGM+YQ+RFK F   L+LS  FF LAF +GLPMI +RP KFAL+FT GS  FMGSFA+LKGP  H+  ML  DRLPFT+ YVGSM ATL+    +     Y++V+TCS  QLLAL WY ++F+PGG+QGM+   +A++   +  ++ C
Sbjct:   33 VMGMNYQERFKMFCALLILSALFFALAFAVGLPMIYIRPQKFALSFTFGSLTFMGSFAILKGPYEHIMGMLVPDRLPFTIVYVGSMMATLFFTFTVGGASGYVLVMTCSAAQLLALMWYLITFLPGGAQGMQVLTAAMYTLLKPVVIVC 181          
BLAST of Ec-28_003140.1 vs. uniprot
Match: B8CDD2_THAPS (Vesicle transport protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDD2_THAPS)

HSP 1 Score: 150 bits (378), Expect = 3.750e-41
Identity = 88/164 (53.66%), Postives = 112/164 (68.29%), Query Frame = 0
Query:   81 IMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLIL---QSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLL-PCIEGCRKTLCFCLSR 240
            IMGM+YQQRF+ F + LLLSV FF L F +G+P++ +RP KFAL+FT GS  FMGSFA+LKGP AHL SMLA DR+ FTV YVGSM  TLY        + Y++V+  S +QLLAL WY ++F+PGG+ GM+    AI     +TLL P + GC K    C+ R
Sbjct:   75 IMGMNYQQRFQIFCICLLLSVVFFALGFFVGIPLLTVRPQKFALSFTCGSITFMGSFAILKGPHAHLMSMLAGDRIHFTVFYVGSMLMTLYLTFTAGGAKGYVLVLGASGLQLLALLWYLVTFLPGGAMGMKVLTQAI-----WTLLKPLMAGCMKFQAVCIGR 233          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A7S3PYN9_9STRA (Vesicle transport protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYN9_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.070e-40
Identity = 97/224 (43.30%), Postives = 128/224 (57.14%), Query Frame = 0
Query:   16 SSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFWQANEKKTDGQAAQALLPGFLRNEAAAPDTDAV----IMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLI---LQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRK 232
            SS FG WY         E+ D  D S  G      +   T   +  A +P      +     +A     I+GM+YQQRF+ F   LLLS  FF L F++GLPMI +RP KFAL+FT GS  FMGSFA+L+GP+ H+  MLA DRLPFTV Y+ SM ATLY       ++ Y+ V+  S +QL AL WY ++F+PGG+QGM+  +SA+    R    P + GC K
Sbjct:    2 SSSFGDWYKGQSG----ESSDSADSSG-GMTLPLFSSFSTQAASVTAGVPSDFGWNSVKSSLEAQMPQQILGMNYQQRFQVFCALLLLSAVFFGLGFMVGLPMITIRPQKFALSFTCGSITFMGSFAILRGPIPHMMGMLAPDRLPFTVVYLSSMMATLYFTFTAHGVKGYVTVLIASGMQLCALLWYLMTFLPGGAQGMKVLMSAMLTMIR----PVVVGCSK 216          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A7S2YFF4_9STRA (Vesicle transport protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YFF4_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.080e-38
Identity = 92/229 (40.17%), Postives = 129/229 (56.33%), Query Frame = 0
Query:   15 ASSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFWQANEKKTDGQAAQALLPGFLRNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLIL---QSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCLSR 240
            +S GFGQWY    D K EE  D  +G +  W F  + +       A   +       +        I+GM YQQRF+ F   L LS  FF +AF +G+P ++ RP KFA++FTLGS  FM SF +LKGP+ HL SM+A DRL FT+ YVGSM  TLY    +     Y+ V++ S  Q+LAL +Y +SF+PGG+ G++Y  +A+     + L P +  C +    CL+R
Sbjct:    2 SSKGFGQWY---DDKKAEENPD--EGGSSSW-FGSSEQLPLFSNEAMQSMSFCSMKASMESQMPKQILGMGYQQRFQVFCGLLFLSALFFAMAFFVGVPTLVARPQKFAISFTLGSLTFMASFGILKGPMEHLNSMIAPDRLWFTLVYVGSMFMTLYLTFTVGGVSGYLWVLSASATQMLALMYYLISFLPGGASGLKYVTAAMG----HFLKPVLVFCARAQAVCLAR 220          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A7R9ZII6_9STRA (Vesicle transport protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZII6_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.140e-37
Identity = 93/228 (40.79%), Postives = 120/228 (52.63%), Query Frame = 0
Query:   16 SSGFGQWYLDMQDAKEEETGDVEDGS-APGWRFWQANEKKTDGQAAQALLPGFLRNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLI---LQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCLS 239
            S+GFGQWY       E++T D    S +  W   +     T               +         I+GM YQQRF+ F   LLLSV FF LAF +GLP IM +P KFAL+FT GS  FM SF +L GP+ H+K M A DR+ FT  Y+GSM  TLY       LQ Y +V+  S +QLLAL WY +SF+PGG+ G    LS + +     L P +  C +    C+S
Sbjct:    2 STGFGQWY------NEQKTDDAAASSNSSSWFDIEQQGFPTFSTEXXXXXXXXXXKQTMEAQMPKKILGMGYQQRFQVFCAMLLLSVLFFALAFFVGLPTIMFKPQKFALSFTCGSLMFMASFGILTGPMEHIKGMCAPDRMLFTTIYLGSMFVTLYLTCTKGGLQGYALVMISSGVQLLALLWYLVSFLPGGTMG----LSIVMRAMVTMLKPILGTCIRMQAMCIS 219          
BLAST of Ec-28_003140.1 vs. uniprot
Match: A0A1Z5JQJ8_FISSO (Vesicle transport protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQJ8_FISSO)

HSP 1 Score: 138 bits (348), Expect = 8.020e-37
Identity = 91/231 (39.39%), Postives = 128/231 (55.41%), Query Frame = 0
Query:   16 SSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFWQANEKKTDGQAAQALLPGFL---RNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLSVAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSMLARDRLPFTVAYVGSMGATLYACLI---LQSYMMVVTCSVIQLLALAWYFLSFVPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCLSR 240
            S+ FGQWY       E+++G+  DGS+     W   ++       +++ P F       A        IMGM YQQRF+ F   L LS  FF LAF +GLP + + PHKF+L+F++GS  FM SF +LKGP+ H KSML  DR+ FT  Y+GS+  TL+       +  Y MV+  S IQLLAL WY +SF+PGG+ G++Y  +A+     + L P    C +    C+ R
Sbjct:    2 STSFGQWY------DEQKSGESGDGSSS----WFGTDQMLPLFDTESM-PNFSFASMKSAMEAQMPKKIMGMGYQQRFQVFCGLLFLSALFFALAFFVGLPTMAVHPHKFSLSFSMGSLMFMSSFGILKGPMEHFKSMLQPDRMLFTTIYLGSLFFTLFCTFSYGGISGYFMVMLSSGIQLLALLWYLISFLPGGAAGLKYVFAAMG----HLLKPVFMACARFQAMCMGR 217          
The following BLAST results are available for this feature:
BLAST of Ec-28_003140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR2_ECTSI1.840e-168100.00Vesicle transport protein n=2 Tax=Ectocarpus TaxID... [more]
A0A835Z9B9_9STRA2.860e-6049.79Vesicle transport protein n=1 Tax=Tribonema minus ... [more]
A0A7S2ATY9_9STRA1.770e-5344.94Vesicle transport protein n=1 Tax=Dictyocha specul... [more]
A0A7S2U6T7_9STRA2.590e-4343.95Vesicle transport protein n=1 Tax=Attheya septentr... [more]
A0A7S0AJZ3_9STRA3.890e-4353.69Vesicle transport protein n=1 Tax=Minutocellus pol... [more]
B8CDD2_THAPS3.750e-4153.66Vesicle transport protein n=1 Tax=Thalassiosira ps... [more]
A0A7S3PYN9_9STRA2.070e-4043.30Vesicle transport protein n=1 Tax=Chaetoceros debi... [more]
A0A7S2YFF4_9STRA1.080e-3840.17Vesicle transport protein n=1 Tax=Amphiprora palud... [more]
A0A7R9ZII6_9STRA4.140e-3740.79Vesicle transport protein n=1 Tax=Craspedostauros ... [more]
A0A1Z5JQJ8_FISSO8.020e-3739.39Vesicle transport protein n=2 Tax=Fistulifera sola... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 101..212
e-value: 1.4E-33
score: 115.7
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 76..232
NoneNo IPR availablePANTHERPTHR23137:SF31coord: 76..232
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..159
NoneNo IPR availableTMHMMTMhelixcoord: 156..175
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 179..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2958724..2962256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003140.1Ec-28_003140.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2958724..2962256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003140.1 ID=Ec-28_003140.1|Name=Ec-28_003140.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=244bp
MFQGVNGFGGGGSKASSGFGQWYLDMQDAKEEETGDVEDGSAPGWRFWQA
NEKKTDGQAAQALLPGFLRNEAAAPDTDAVIMGMSYQQRFKGFVVSLLLS
VAFFVLAFVIGLPMIMLRPHKFALTFTLGSFFFMGSFAMLKGPVAHLKSM
LARDRLPFTVAYVGSMGATLYACLILQSYMMVVTCSVIQLLALAWYFLSF
VPGGSQGMRYFLSAIHKTARYTLLPCIEGCRKTLCFCLSRGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR011691Vesicle_transpt_SFT2