Ec-28_003130.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003130.1
Unique NameEc-28_003130.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length98
Homology
BLAST of Ec-28_003130.1 vs. uniprot
Match: D8LTR3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR3_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 9.380e-64
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
Query:    1 MPLIGNIVTGGLRMSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWKPRRGGQALLDSA 97
            MPLIGNIVTGGLRMSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWKPRRGGQALLDSA
Sbjct:    1 MPLIGNIVTGGLRMSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWKPRRGGQALLDSA 97          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A835ZJH5_9STRA (Mitochondrial ribosomal protein L27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJH5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.910e-29
Identity = 49/84 (58.33%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    1 MPLIGNIVTGGLRMSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVW 84
            MP++G+I  G LRMSKY+SK+A KR P+  K GNKNFYKG GA  EG +NS+ +FI+D +K LE++APDL  F+LKPYV+K+++
Sbjct:    1 MPVLGDIARGALRMSKYLSKAATKRAPLHRKHGNKNFYKGTGARSEGKLNSKAKFILDKDKLLELVAPDLTNFQLKPYVAKSIY 84          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A448ZFN2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFN2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.600e-26
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 0
Query:   14 MSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWK-----PRRGGQ 91
            +SKYISKSARKR+P+T+K   K +YKGKGATKEG + S+G+FI DP+K+LE+I PDL+GF LKPY+++   K      RR GQ
Sbjct:   17 ISKYISKSARKRMPLTTKRAGKGYYKGKGATKEGRLTSKGKFIPDPKKKLELIVPDLEGFNLKPYIARTASKIAPELRRRPGQ 99          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A7S4A9E0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9E0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.500e-25
Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = 0
Query:   14 MSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWK-----PRRGGQ 91
            +SKYISKSARKR+P+T+K   K +YKG G+TKEG + S+G+F+ DP+K+LE++APDL+GF LKPY+++   K      RR GQ
Sbjct:   52 ISKYISKSARKRLPLTTKRAGKGYYKGNGSTKEGRLTSKGKFVSDPKKKLELMAPDLEGFNLKPYIARTATKIAPELRRRPGQ 134          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A1Z5J9Q3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9Q3_FISSO)

HSP 1 Score: 99.8 bits (247), Expect = 3.700e-25
Identity = 43/70 (61.43%), Postives = 60/70 (85.71%), Query Frame = 0
Query:   14 MSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAV 83
            MSKY+SK+A+KR+ +T+K  +K FYKG GATKEG + S+G+FIVDP +RLE++ PDL GFKLKPY++++V
Sbjct:   29 MSKYLSKAAKKRLVLTTKRAHKGFYKGNGATKEGRLTSKGKFIVDPLRRLELVVPDLTGFKLKPYIARSV 98          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A7S1D0Q8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0Q8_CYCTE)

HSP 1 Score: 99.4 bits (246), Expect = 4.180e-25
Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0
Query:   14 MSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWK 85
            MSK++SKSA KR+P+ +K   K FYKGKG TK+G + S+G+FIVDP KRLE++ PDL GFKLKPY++  V K
Sbjct:   21 MSKFLSKSATKRLPLGTKRARKGFYKGKGGTKDGRLTSKGKFIVDPAKRLELVVPDLQGFKLKPYIASTVPK 92          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A7S3L6Q4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6Q4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.030e-24
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0
Query:   14 MSKYISKSARKRIPMTSKMGNKN-FYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWK 85
            MSKY+SKSARKR P+T+K  ++  FYKGKG TKEG + S+G+FIVDP KRLE+I PDL GFKLKPY++ +V K
Sbjct:   27 MSKYMSKSARKRQPLTTKRASRGGFYKGKGGTKEGRLTSKGKFIVDPLKRLELIVPDLTGFKLKPYIAASVPK 99          
BLAST of Ec-28_003130.1 vs. uniprot
Match: W7U3M5_9STRA (Mitochondrial ribosomal protein l27 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3M5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.610e-24
Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    1 MPLIGNIVTGGLRMSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWK 85
            MPL+  I TG  R+SKY+SK+ARKR+P++ K   K FYKG      G INS GRF +D  KR+E+  PDL GFKLKPYVS  V+K
Sbjct:    1 MPLLAGINTGFQRLSKYLSKAARKRLPLSPKRTGKGFYKGNKCASTGRINSIGRFRMDERKRVELNVPDLTGFKLKPYVSPTVFK 85          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A7S0AF32_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AF32_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.830e-23
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    8 VTGGLR-MSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAV 83
            V G +R MSK++SKSARKR+P+T+K   K FYKG GATKEG     G+F+VD   RLE++APDL GFKLKPYV++ V
Sbjct:   71 VGGAVRCMSKFLSKSARKRLPLTTKRAKKGFYKGNGATKEGYFGKGGKFVVDKSLRLELVAPDLTGFKLKPYVAQQV 147          
BLAST of Ec-28_003130.1 vs. uniprot
Match: A0A7S2KAW4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAW4_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.430e-23
Identity = 42/72 (58.33%), Postives = 58/72 (80.56%), Query Frame = 0
Query:   14 MSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWK 85
            MSKY++K+A KR+P+T+K   K +YKG GAT EG I S+G+FI DP K+L+++ PDL+GFKLKPY++ AV K
Sbjct:   65 MSKYLTKAATKRLPLTNKKVKKGYYKGNGATVEGRITSKGKFIADPMKKLQLVVPDLEGFKLKPYIASAVSK 136          
The following BLAST results are available for this feature:
BLAST of Ec-28_003130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR3_ECTSI9.380e-64100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJH5_9STRA2.910e-2958.33Mitochondrial ribosomal protein L27-domain-contain... [more]
A0A448ZFN2_9STRA1.600e-2659.04Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4A9E0_9STRA3.500e-2555.42Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5J9Q3_FISSO3.700e-2561.43Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1D0Q8_CYCTE4.180e-2561.11Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3L6Q4_9STRA1.030e-2465.75Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
W7U3M5_9STRA3.610e-2456.47Mitochondrial ribosomal protein l27 n=1 Tax=Nannoc... [more]
A0A7S0AF32_9STRA1.830e-2361.04Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2KAW4_9STRA2.430e-2358.33Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019189Ribosomal protein L27/L41, mitochondrialPFAMPF09809MRP-L27coord: 20..83
e-value: 9.8E-19
score: 67.3
IPR019189Ribosomal protein L27/L41, mitochondrialPANTHERPTHR21338MITOCHONDRIAL RIBOSOMAL PROTEIN L41coord: 13..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2955490..2957489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003130.1Ec-28_003130.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2955490..2957489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003130.1 ID=Ec-28_003130.1|Name=Ec-28_003130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=98bp
MPLIGNIVTGGLRMSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTIN
SRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWKPRRGGQALLDSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019189Ribosomal_L27/L41_mit