Ec-28_003060.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003060.1
Unique NameEc-28_003060.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length235
Homology
BLAST of Ec-28_003060.1 vs. uniprot
Match: D8LTR9_ECTSI (Mitochondrial inner membrane protease subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR9_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 7.880e-170
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query:    1 MFALRFSRVRPYPGYCRASQQVLRGSISSSSGRLLSVQRDGTRVVGGESANGRQRQHRQQKHQDRGGPHDSGSSSSWGHEGAKFVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE 234
            MFALRFSRVRPYPGYCRASQQVLRGSISSSSGRLLSVQRDGTRVVGGESANGRQRQHRQQKHQDRGGPHDSGSSSSWGHEGAKFVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE
Sbjct:    1 MFALRFSRVRPYPGYCRASQQVLRGSISSSSGRLLSVQRDGTRVVGGESANGRQRQHRQQKHQDRGGPHDSGSSSSWGHEGAKFVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE 234          
BLAST of Ec-28_003060.1 vs. uniprot
Match: UPI001929B7FD (LOW QUALITY PROTEIN: mitochondrial inner membrane protease subunit 1-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929B7FD)

HSP 1 Score: 119 bits (298), Expect = 4.420e-30
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 0
Query:   93 CAYQCLREYVVEPCLVHGPSMRPTIE-HNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISV-RPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE 234
            CA      YV    LV GPSM P I     ++ + ++  R  TI+ G +VL++SP    ++V KRVTGL GDS++  R P    ++++ +     +VP+GHVW+ GDNV  S+DSR FG VP  L+ G    +VWP KDFG+IE
Sbjct:   35 CAVHVFNNYVCSIALVRGPSMLPAINVSGDVVAVERISVRSGTIDVGDVVLLRSPENPLKIVTKRVTGLEGDSVTFERDPARGDHSAKTV-----LVPKGHVWVQGDNVYESRDSRQFGPVPYGLIHGRAFCKVWPPKDFGYIE 173          
BLAST of Ec-28_003060.1 vs. uniprot
Match: UPI001E27262C (mitochondrial inner membrane protease subunit 1 n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E27262C)

HSP 1 Score: 118 bits (296), Expect = 4.610e-30
Identity = 61/141 (43.26%), Postives = 80/141 (56.74%), Query Frame = 0
Query:   93 CAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFI 233
            C   CL EYV +  L  GPSM PT+E N++L    +  R + +  G IV  + P+   + + KR+TGLPGD +    P           + S+VVP GHVWL GDN DNSKDSR +G VPQ L+ G V+ RVWP     F+
Sbjct:   22 CITHCLIEYVGDFVLCTGPSMEPTLETNNILFTEHITPRLQRLRRGDIVTAKCPIYPTQNICKRITGLPGDRVKGFLP-----------RGSQVVPRGHVWLEGDNSDNSKDSRMYGPVPQGLIRGRVVCRVWPLNRISFL 151          
BLAST of Ec-28_003060.1 vs. uniprot
Match: A0A401PM86_SCYTO (Mitochondrial inner membrane protease subunit n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401PM86_SCYTO)

HSP 1 Score: 118 bits (295), Expect = 8.880e-30
Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 0
Query:   93 CAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE 234
            C   C  EY+ E  +  GPSM PTI+ N +++  K+  +   IE G +V+ +SP      + KRV GL GD +    P  D + SQ        VP+GHVWL GDN+ NS DSRN+G VP AL+      ++WP K+FGF++
Sbjct:   21 CIAHCAFEYLGEIVMCSGPSMEPTIKTNDIIISEKLSRQFYRIEKGDVVIAKSPSNPKMNICKRVIGLEGDKVYTGGP-LDAFRSQ------RYVPKGHVWLQGDNLHNSTDSRNYGPVPYALIRSRACFKIWPPKEFGFLK 155          
BLAST of Ec-28_003060.1 vs. uniprot
Match: UPI00193EBB78 (mitochondrial inner membrane protease subunit 1 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193EBB78)

HSP 1 Score: 117 bits (294), Expect = 1.090e-29
Identity = 64/146 (43.84%), Postives = 81/146 (55.48%), Query Frame = 0
Query:   84 FVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKD 229
            FV  +    C   C  EY  +  +  GPSM PTI  ++++L   +  R RTI+ G IV+ +SP+   + + KRVTGLPGD +         +N         VVP GHVWL GDN DNS DSR FG VP AL+ G VL RVWP  D
Sbjct:   14 FVSCLVQASCLAHCALEYGADFVVCSGPSMEPTILTDNVILSEHVSPRLRTIKQGDIVIAKSPVNPTQFICKRVTGLPGDKVR------STFNYN-------VVPVGHVWLEGDNRDNSSDSRTFGPVPAALIRGRVLCRVWPISD 146          
BLAST of Ec-28_003060.1 vs. uniprot
Match: IMP1L_XENTR (Mitochondrial inner membrane protease subunit 1 n=4 Tax=Xenopus TaxID=8353 RepID=IMP1L_XENTR)

HSP 1 Score: 117 bits (294), Expect = 1.360e-29
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 0
Query:   93 CAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFG 231
            C   C  EY+ E  +  GPSM PTI +  +LL + +     +I  G I++ +SP +    + KRV GL GD + +  P         + KR   VP+GHVWL GDN+DNS DSR++G VP AL+ G + LRVWP + FG
Sbjct:   21 CIAHCAFEYIGEVVICSGPSMEPTIRNYDVLLCDNLSRHFFSIHKGDIIVAKSPDKPSVNICKRVIGLEGDKVCMSSPS-------ALLKRHTYVPKGHVWLEGDNLDNSTDSRSYGPVPYALIRGRICLRVWPLESFG 152          
BLAST of Ec-28_003060.1 vs. uniprot
Match: A0A6P7XVK6_9AMPH (Mitochondrial inner membrane protease subunit n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7XVK6_9AMPH)

HSP 1 Score: 116 bits (291), Expect = 3.710e-29
Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   84 FVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE 234
            F+     + C   C  EY+ E  +  GPSM PTI++  +++   +     +I+ G I++ +SP +    + KRV GL GD + V  P         + K+   VP+GHVWL GDN+ NS DSR++G VP AL+ G + L+VWP   FGF++
Sbjct:   12 FLGYTVQYGCIAHCAFEYLGEIVVCSGPSMEPTIKNYDVVISENLSRHFYSIQKGDIIIAKSPNDPRTNICKRVIGLEGDKVCVSDPSH-------LLKKHSYVPKGHVWLEGDNLKNSTDSRSYGPVPYALIKGRIFLKVWPLNAFGFLQ 155          
BLAST of Ec-28_003060.1 vs. uniprot
Match: UPI00112DC7D0 (mitochondrial inner membrane protease subunit 1 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112DC7D0)

HSP 1 Score: 116 bits (291), Expect = 3.710e-29
Identity = 56/142 (39.44%), Postives = 82/142 (57.75%), Query Frame = 0
Query:   93 CAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE 234
            C   C  EY+ E  +  GPSM PTI++  +++   +     +I+ G IV+ +SP +    + KRV GL GD + V  P         + K+   VP+GHVWL GDN+ NS DSR +G VP AL+ G + L++WP  DFGF++
Sbjct:   21 CIAHCAFEYLGEIVVCSGPSMEPTIKNYDVVISESLSRHLFSIQKGDIVIAKSPNDPNTNICKRVIGLEGDKVCVSHPS-------DLLKKHSYVPKGHVWLEGDNLKNSTDSRFYGPVPYALIKGRICLKIWPLNDFGFLQ 155          
BLAST of Ec-28_003060.1 vs. uniprot
Match: A0A8B8I4N9_9NEOP (Mitochondrial inner membrane protease subunit n=3 Tax=Vanessa TaxID=42274 RepID=A0A8B8I4N9_9NEOP)

HSP 1 Score: 116 bits (290), Expect = 3.740e-29
Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 0
Query:   93 CAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFI 233
            C   C+ EYV +  L  GPSM PT+E N++L    +  R + +  G I+  + P +  + + KR+TGLPGD +    P           + S+VVP GHVWL GDN DNSKDSR +G VPQ L+ G V+ RVWP      +
Sbjct:   22 CITHCIIEYVGDFVLCTGPSMEPTLETNNILFTEHITPRLQRLRRGDIITAKCPTDPKQNICKRITGLPGDKVKGYFP-----------RGSQVVPRGHVWLEGDNSDNSKDSRMYGPVPQGLIRGRVVCRVWPLNKMSLL 151          
BLAST of Ec-28_003060.1 vs. uniprot
Match: UPI001263232F (mitochondrial inner membrane protease subunit 1-like isoform X1 n=2 Tax=Pistacia vera TaxID=55513 RepID=UPI001263232F)

HSP 1 Score: 116 bits (290), Expect = 5.240e-29
Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 0
Query:   76 SWGHEGAKFVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHN-SLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFG 231
            S+  EG      +  F C    +  Y+V P L  GPSM PT+    +++L  ++  R   +  G +VLV+SP    ++V KRV G+ GD I+     + V    G +  + VVP+GH+W+ GDN+ NS DSRNFG+VP  L+   +  ++WP KDFG
Sbjct:   12 SFAKEGFDISLAVGKFFCCLHVVNSYLVTPALTSGPSMLPTLNLTPTIVLAERLSPRFNKLSPGDVVLVRSPEVPRKIVTKRVIGVEGDRIA-----YVVDPQNGDQSETIVVPKGHIWIQGDNIYNSYDSRNFGAVPYGLLEAKIFWKIWPPKDFG 163          
The following BLAST results are available for this feature:
BLAST of Ec-28_003060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR9_ECTSI7.880e-170100.00Mitochondrial inner membrane protease subunit n=2 ... [more]
UPI001929B7FD4.420e-3042.36LOW QUALITY PROTEIN: mitochondrial inner membrane ... [more]
UPI001E27262C4.610e-3043.26mitochondrial inner membrane protease subunit 1 n=... [more]
A0A401PM86_SCYTO8.880e-3040.85Mitochondrial inner membrane protease subunit n=2 ... [more]
UPI00193EBB781.090e-2943.84mitochondrial inner membrane protease subunit 1 n=... [more]
IMP1L_XENTR1.360e-2941.73Mitochondrial inner membrane protease subunit 1 n=... [more]
A0A6P7XVK6_9AMPH3.710e-2937.09Mitochondrial inner membrane protease subunit n=2 ... [more]
UPI00112DC7D03.710e-2939.44mitochondrial inner membrane protease subunit 1 n=... [more]
A0A8B8I4N9_9NEOP3.740e-2941.13Mitochondrial inner membrane protease subunit n=3 ... [more]
UPI001263232F5.240e-2937.58mitochondrial inner membrane protease subunit 1-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 101..117
score: 36.83
coord: 153..165
score: 52.93
coord: 187..206
score: 53.81
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 93..227
e-value: 1.6E-26
score: 91.1
IPR015927Peptidase S24/S26A/S26B/S26CPFAMPF00717Peptidase_S24coord: 108..168
e-value: 4.5E-9
score: 36.1
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 184..220
e-value: 9.7E-5
score: 22.2
NoneNo IPR availableGENE3D2.10.109.10coord: 98..231
e-value: 1.7E-23
score: 84.8
NoneNo IPR availablePANTHERPTHR12383PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATEDcoord: 86..233
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 155..167
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 99..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2893006..2896229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003060.1Ec-28_003060.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2893006..2896229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003060.1 ID=Ec-28_003060.1|Name=Ec-28_003060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=235bp
MFALRFSRVRPYPGYCRASQQVLRGSISSSSGRLLSVQRDGTRVVGGESA
NGRQRQHRQQKHQDRGGPHDSGSSSSWGHEGAKFVRQMAWFVCAYQCLRE
YVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIG
RLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVD
NSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR015927Peptidase_S24_S26A/B/C
IPR019533Peptidase_S26
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR036286LexA/Signal_pep-like_sf