Ec-28_002950.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002950.1
Unique NameEc-28_002950.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length85
Homology
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BLAST of Ec-28_002950.1 vs. uniprot
Match: D8LTS8_ECTSI (FoP_duplication domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS8_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.620e-24
Identity = 58/84 (69.05%), Postives = 58/84 (69.05%), Query Frame = 0 
Query:    1 MDNYFQRDEDKEGGDADSGGKGRGRKGRAPPATAEKLDSAMDSYWGNGKAAEAAPEGDEKGNDDVAAMEGQDEEAPAADSAGGN 84
            MDNYFQRDEDKEGGDADS                          WGNGKAAEAAPEGDEKGNDDVAAMEGQDEEAPAADSAGGN
Sbjct:  164 MDNYFQRDEDKEGGDADSXXXXXXXXXXXXXXXXXXXXXXXXXXWGNGKAAEAAPEGDEKGNDDVAAMEGQDEEAPAADSAGGN 247
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BLAST of Ec-28_002950.1 vs. uniprot
Match: A0A6H5KIZ9_9PHAE (FoP_duplication domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIZ9_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 8.650e-14
Identity = 49/84 (58.33%), Postives = 51/84 (60.71%), Query Frame = 0 
Query:    1 MDNYFQRDEDKEGGDADSGGKGRGRKGRAPPATAEKLDSAMDSYWGNGKAAEAAPEGDEKGNDDVAAMEGQDEEAPAADSAGGN 84
            MDNYFQRD DKEG                               WGNGKAAEAAPEG+EK N+DVAAMEGQDEEAPAADSAGGN
Sbjct:  139 MDNYFQRD-DKEGXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXWGNGKAAEAAPEGNEKENNDVAAMEGQDEEAPAADSAGGN 219
The following BLAST results are available for this feature:
BLAST of Ec-28_002950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTS8_ECTSI1.620e-2469.05FoP_duplication domain-containing protein n=1 Tax=... [more]
A0A6H5KIZ9_9PHAE8.650e-1458.33FoP_duplication domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025715Chromatin target of PRMT1 protein, C-terminalPFAMPF13865FoP_duplicationcoord: 12..49
e-value: 1.2E-7
score: 32.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2728823..2730439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002950.1Ec-28_002950.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2728823..2730439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002950.1 ID=Ec-28_002950.1|Name=Ec-28_002950.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=85bp
MDNYFQRDEDKEGGDADSGGKGRGRKGRAPPATAEKLDSAMDSYWGNGKA
AEAAPEGDEKGNDDVAAMEGQDEEAPAADSAGGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025715FoP_C