Ec-28_002930.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002930.2
Unique NameEc-28_002930.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length206
Homology
BLAST of Ec-28_002930.2 vs. uniprot
Match: D8LTT0_ECTSI (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTT0_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 4.210e-142
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query:    1 MPEKYYVAGLDSDSNSVYVARGADNPSLFARGLSVLASKFSWVAGCPPPELLSGSGSHPSAPSRREATKAGGGPAGVEAPVPTKERQPAAPGGEPIDAGEMEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAEGNCSPALVRSMRPPSSRPAATKNCHAKM 205
            MPEKYYVAGLDSDSNSVYVARGADNPSLFARGLSVLASKFSWVAGCPPPELLSGSGSHPSAPSRREATKAGGGPAGVEAPVPTKERQPAAPGGEPIDAGEMEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAEGNCSPALVRSMRPPSSRPAATKNCHAKM
Sbjct:  287 MPEKYYVAGLDSDSNSVYVARGADNPSLFARGLSVLASKFSWVAGCPPPELLSGSGSHPSAPSRREATKAGGGPAGVEAPVPTKERQPAAPGGEPIDAGEMEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAEGNCSPALVRSMRPPSSRPAATKNCHAKM 491          
BLAST of Ec-28_002930.2 vs. uniprot
Match: A0A7I4DP41_PHYPA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DP41_PHYPA)

HSP 1 Score: 63.5 bits (153), Expect = 2.330e-8
Identity = 52/200 (26.00%), Postives = 77/200 (38.50%), Query Frame = 0
Query:    1 MPEKYYVAGLDSDSNSVYVARGADNPSLFARGLSVLASKFSWVAGCPPPELLSGSGSHPSAPSRREATKAGGGPAGVEAPVPTKERQPAAPGGEPIDAGEMEGPPPVLRCEYRSRHRQALLPCGV------------ELLGGGGSGASVPRP---------------VVHVRFDEPAKAIAPGQVVALYKEGICLGGGPI 173
            +P+ +YV G D  +N VYVA GAD+P+LF    S +A    W++G PP +L                                                  +G P  L C +++R+RQ+L  C V            + +G  G   S  R                ++ +RF+EP +AI PGQ + LY   +CLG   I
Sbjct:  217 VPKPFYVVGKDVQNNVVYVAMGADHPALFCT--SAVAGDPFWISGSPPKQL-------------------------------------------------QDGQP--LTCMFKARYRQSLERCTVCFLDSKNEVAVSQSMGVAGKHTSEFRSSDFCRPPHTLEEGTGLLQIRFEEPTRAITPGQALVLYDGDVCLGASVI 363          
BLAST of Ec-28_002930.2 vs. uniprot
Match: A0A2S2E379_9ALTE (tRNA-specific 2-thiouridylase MnmA n=1 Tax=Saliniradius amylolyticus TaxID=2183582 RepID=A0A2S2E379_9ALTE)

HSP 1 Score: 62.0 bits (149), Expect = 7.610e-8
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 0
Query:   96 IDAGEMEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGG 171
            +D  + +GP   +RC  ++R+RQ  +PC V     G          VHV FD+P KA+ PGQ    Y++ +CLGGG
Sbjct:  293 LDWVDRKGPTDEIRCVVKTRYRQHDIPCRVVPQDSG---------CVHVHFDQPQKAVTPGQSAVFYQDDVCLGGG 359          
BLAST of Ec-28_002930.2 vs. uniprot
Match: A0A1L4BQ03_9GAMM (tRNA-specific 2-thiouridylase MnmA n=3 Tax=Francisella TaxID=262 RepID=A0A1L4BQ03_9GAMM)

HSP 1 Score: 61.6 bits (148), Expect = 1.010e-7
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0
Query:   94 EPIDAGEMEGPPPV--LRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPIL 174
            E ID   + G PP    +C+ + R+RQ   PC V ++ GG         +V V F++P +AI PGQ V  Y E +CLGGG I+
Sbjct:  285 EAIDLSWVAGHPPADKFKCKAKVRYRQKDQPCEVSVMQGG---------LVKVLFEQPQRAITPGQSVVFYNEDVCLGGGIIV 358          
BLAST of Ec-28_002930.2 vs. uniprot
Match: A0A1M4PJW7_9FIRM (tRNA-specific 2-thiouridylase MnmA n=3 Tax=Firmicutes TaxID=1239 RepID=A0A1M4PJW7_9FIRM)

HSP 1 Score: 61.6 bits (148), Expect = 1.060e-7
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  102 EGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAE 177
            E P   L+C  + R+RQ+ +P  V++L  G          +H+++DEP KA+ PGQV  LYK+ ICLGG  I   E
Sbjct:  292 EAPNMPLKCTAKFRYRQSDIPVMVDVLEDGN---------LHIKYDEPVKAVTPGQVAVLYKDEICLGGSIIKSIE 358          
BLAST of Ec-28_002930.2 vs. uniprot
Match: A0A4P7XFE1_9ALTE (tRNA-specific 2-thiouridylase MnmA n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A4P7XFE1_9ALTE)

HSP 1 Score: 61.6 bits (148), Expect = 1.080e-7
Identity = 32/70 (45.71%), Postives = 40/70 (57.14%), Query Frame = 0
Query:  104 PPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPI 173
            PP  LRC+ ++R+RQ   PC VE L  GG           V FDEP +A+ PGQ V  Y + +CLGGG I
Sbjct:  301 PPMPLRCKAKTRYRQPDQPCLVETLPAGG---------FRVVFDEPQRAVTPGQSVVFYLDQVCLGGGVI 361          
BLAST of Ec-28_002930.2 vs. uniprot
Match: A0A2D8NZ15_9GAMM (tRNA-specific 2-thiouridylase MnmA n=5 Tax=Salinicola TaxID=404432 RepID=A0A2D8NZ15_9GAMM)

HSP 1 Score: 61.6 bits (148), Expect = 1.090e-7
Identity = 34/85 (40.00%), Postives = 45/85 (52.94%), Query Frame = 0
Query:  104 PPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAEGNCSPALVRSM 188
            PP   R   ++R+RQ  +PC V LL  G          + VRFDEP +A+ PGQ + LY   ICLGG  ++RA G    A V  +
Sbjct:  311 PPEASRLSAKTRYRQRDVPCEVTLLADG---------ELEVRFDEPQRAVTPGQSLVLYDGEICLGGA-VIRATGTADGAAVAEL 385          
BLAST of Ec-28_002930.2 vs. uniprot
Match: UPI0019D3F3B7 (tRNA 2-thiouridine(34) synthase MnmA n=1 Tax=Bowmanella dokdonensis TaxID=751969 RepID=UPI0019D3F3B7)

HSP 1 Score: 61.2 bits (147), Expect = 1.390e-7
Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 0
Query:   96 IDAGEMEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGG 171
            +D  + +GP    RC  ++R+RQ  +PC +  +  G          + VRFDEP KA+ PGQ    Y++ +CLGGG
Sbjct:  293 LDWVDRQGPQQPQRCVVKTRYRQTDIPCTITPMSDG---------QLEVRFDEPQKAVTPGQSAVFYQDEVCLGGG 359          
BLAST of Ec-28_002930.2 vs. uniprot
Match: MNMA_CHRSD (tRNA-specific 2-thiouridylase MnmA n=16 Tax=Halomonadaceae TaxID=28256 RepID=MNMA_CHRSD)

HSP 1 Score: 61.2 bits (147), Expect = 1.440e-7
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 0
Query:   94 EPIDAGEMEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAEGNCS 181
            EP++    + P P  R + ++R+RQ  + C V +L  GG         V  RFDEP +A+ PGQ + LY   ICLGGG ++R+  N S
Sbjct:  299 EPVEWVAGQPPAPEARLQAKTRYRQQDVACHVRVLEDGG---------VEARFDEPQRAVTPGQSLVLYDGDICLGGG-VIRSTWNHS 376          
BLAST of Ec-28_002930.2 vs. uniprot
Match: UPI00055A1205 (tRNA 2-thiouridine(34) synthase MnmA n=1 Tax=Silanimonas lenta TaxID=265429 RepID=UPI00055A1205)

HSP 1 Score: 60.8 bits (146), Expect = 1.860e-7
Identity = 33/81 (40.74%), Postives = 42/81 (51.85%), Query Frame = 0
Query:  102 EGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAEGNCSP 182
            E PP  LRCE + R+RQA   C V+    GG         V VRFD+P +A+ PGQ + LY+   CLGG  I   +    P
Sbjct:  284 EAPPLPLRCEAQVRYRQAAQACTVQARDDGG---------VDVRFDQPQRAVTPGQSLVLYRGEECLGGAVIAATDAPLDP 355          
The following BLAST results are available for this feature:
BLAST of Ec-28_002930.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTT0_ECTSI4.210e-142100.00tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
A0A7I4DP41_PHYPA2.330e-826.00tRNA-5-taurinomethyluridine 2-sulfurtransferase n=... [more]
A0A2S2E379_9ALTE7.610e-838.16tRNA-specific 2-thiouridylase MnmA n=1 Tax=Salinir... [more]
A0A1L4BQ03_9GAMM1.010e-739.76tRNA-specific 2-thiouridylase MnmA n=3 Tax=Francis... [more]
A0A1M4PJW7_9FIRM1.060e-740.79tRNA-specific 2-thiouridylase MnmA n=3 Tax=Firmicu... [more]
A0A4P7XFE1_9ALTE1.080e-745.71tRNA-specific 2-thiouridylase MnmA n=2 Tax=Alterom... [more]
A0A2D8NZ15_9GAMM1.090e-740.00tRNA-specific 2-thiouridylase MnmA n=5 Tax=Salinic... [more]
UPI0019D3F3B71.390e-736.84tRNA 2-thiouridine(34) synthase MnmA n=1 Tax=Bowma... [more]
MNMA_CHRSD1.440e-738.64tRNA-specific 2-thiouridylase MnmA n=16 Tax=Halomo... [more]
UPI00055A12051.860e-740.74tRNA 2-thiouridine(34) synthase MnmA n=1 Tax=Silan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03054tRNA_Me_transcoord: 107..173
e-value: 6.0E-9
score: 35.2
NoneNo IPR availableGENE3D2.40.30.10coord: 98..177
e-value: 5.3E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR11933TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASEcoord: 1..177
NoneNo IPR availablePANTHERPTHR11933:SF5MITOCHONDRIAL TRNA-SPECIFIC 2-THIOURIDYLASE 1coord: 1..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2717045..2717662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002930.2Ec-28_002930.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2712227..2719569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002930.2 ID=Ec-28_002930.2|Name=Ec-28_002930.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=206bp
MPEKYYVAGLDSDSNSVYVARGADNPSLFARGLSVLASKFSWVAGCPPPE
LLSGSGSHPSAPSRREATKAGGGPAGVEAPVPTKERQPAAPGGEPIDAGE
MEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPA
KAIAPGQVVALYKEGICLGGGPILRAEGNCSPALVRSMRPPSSRPAATKN
CHAKM*
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