Ec-28_002490.3 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002490.3
Unique NameEc-28_002490.3
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length119
Homology
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BLAST of Ec-28_002490.3 vs. uniprot
Match: D8LGT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT9_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 6.990e-39
Identity = 74/94 (78.72%), Postives = 77/94 (81.91%), Query Frame = 0 
Query:    1 MYLEEEELVALLRALASLSSPGSAFCATCVSAESVERASNSASPQMGRWKWGGDYPQAVFEANSPQGWSFNGVTCGTPG-IPSRGRLRSGFRGQ 93
            MYLEE+ELVALLR LASLSSPGSAFCATCVSAESVERA NSASP MGRWKWG D PQA FEAN P+GWSFNGVTCGTPG  P       GF G+
Sbjct:  281 MYLEEKELVALLRVLASLSSPGSAFCATCVSAESVERAQNSASPLMGRWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPQGADYGVGFVGK 374
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BLAST of Ec-28_002490.3 vs. uniprot
Match: D7FXP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP3_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 4.000e-34
Identity = 67/79 (84.81%), Postives = 68/79 (86.08%), Query Frame = 0 
Query:    1 MYLEEEELVALLRALASLSSPGSAFCATCVSAESVERASNSASPQMGRWKWGGDYPQAVFEANSPQGWSFNGVTCGTPG 79
            MYLEE+ELVALLR LASLSSPGSAFCAT VSAESVER   SASP MGRWK G D P A FEANSPQGWSFNGVTCGTPG
Sbjct:  186 MYLEEKELVALLRVLASLSSPGSAFCATYVSAESVERTHISASPPMGRWKRGSDKPPAFFEANSPQGWSFNGVTCGTPG 264
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BLAST of Ec-28_002490.3 vs. uniprot
Match: A0A6H5KGH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH3_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.230e-28
Identity = 54/73 (73.97%), Postives = 57/73 (78.08%), Query Frame = 0 
Query:   22 GSAFCATCVSAESVERASNSASPQMGRWKWGGDYPQAVFEANSPQGWSFNGVTCGTPG-IPSRGRLRSGFRGQ 93
            GSAFCATCVSAESVERA N+ASP MGRWKWG D PQA FEAN P+GWSFNGVTCGTPG  P       GF G+
Sbjct:   74 GSAFCATCVSAESVERAQNNASPLMGRWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPEGADYGVGFVGK 146
[Close]
BLAST of Ec-28_002490.3 vs. uniprot
Match: A0A6H5KWH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH6_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 6.140e-14
Identity = 32/49 (65.31%), Postives = 34/49 (69.39%), Query Frame = 0 
Query:   46 MGRWKWGGDYPQAVFEANSPQGWSFNGVTCGTPG-IPSRGRLRSGFRGQ 93
            MG WKWG D PQA FEAN P+GWSFNGVTCGTPG  P       GF G+
Sbjct:    1 MGHWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPEGADYGVGFVGK 49
The following BLAST results are available for this feature:
BLAST of Ec-28_002490.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LGT9_ECTSI6.990e-3978.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FXP3_ECTSI4.000e-3484.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGH3_9PHAE2.230e-2873.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWH6_9PHAE6.140e-1465.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 1..79
e-value: 2.5E-6
score: 28.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2310746..2312661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002490.3Ec-28_002490.3Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2310498..2331921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002490.3 ID=Ec-28_002490.3|Name=Ec-28_002490.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=119bp
MYLEEEELVALLRALASLSSPGSAFCATCVSAESVERASNSASPQMGRWK
WGGDYPQAVFEANSPQGWSFNGVTCGTPGIPSRGRLRSGFRGQGGGVRHR
VLFVVFVFFLRGAGSGEW*
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