Ec-28_002460.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002460.2
Unique NameEc-28_002460.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length338
Homology
BLAST of Ec-28_002460.2 vs. uniprot
Match: D7FXN9_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN9_ECTSI)

HSP 1 Score: 647 bits (1669), Expect = 1.180e-230
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query:    1 MRSHRGWEVPQSPSCTGTGSQSPSAVLNGPSGADTEQHAADLGRARSRRKGRGLVVSARAGAGEDRPSKEEGQRSTTATTAPGFTRHSFLAGTEGTTVTNVAAAPSPPLSPRPSRRRVHHSKTPGTPAASPTPTAARRLSRKNPLAVCLTVVSIAVAVLLVILALAAYGGLWPWRDLFPYRGELFQPDRDCRRVSTGAEVACGSPWSAPCFDRTRCRSGGGRSGRRRARAAXXXXGSTRGAGGGDLLSVYVHDETCSMRKSSEIMASYRGVAVPLLWNEAAKALRHVAAERDLLMDTPDEACIVFYAVPERGECVSKTPTWGGGQNHVLLDLNDQSR 337
            MRSHRGWEVPQSPSCTGTGSQSPSAVLNGPSGADTEQHAADLGRARSRRKGRGLVVSARAGAGEDRPSKEEGQRSTTATTAPGFTRHSFLAGTEGTTVTNVAAAPSPPLSPRPSRRRVHHSKTPGTPAASPTPTAARRLSRKNPLAVCLTVVSIAVAVLLVILALAAYGGLWPWRDLFPYRGELFQPDRDCRRVSTGAEVACGSPWSAPCFDRTRCRSGGGRSGRRRARAAXXXXGSTRGAGGGDLLSVYVHDETCSMRKSSEIMASYRGVAVPLLWNEAAKALRHVAAERDLLMDTPDEACIVFYAVPERGECVSKTPTWGGGQNHVLLDLNDQSR
Sbjct:    1 MRSHRGWEVPQSPSCTGTGSQSPSAVLNGPSGADTEQHAADLGRARSRRKGRGLVVSARAGAGEDRPSKEEGQRSTTATTAPGFTRHSFLAGTEGTTVTNVAAAPSPPLSPRPSRRRVHHSKTPGTPAASPTPTAARRLSRKNPLAVCLTVVSIAVAVLLVILALAAYGGLWPWRDLFPYRGELFQPDRDCRRVSTGAEVACGSPWSAPCFDRTRCRSGGGRSGRRRARAAXXXXGSTRGAGGGDLLSVYVHDETCSMRKSSEIMASYRGVAVPLLWNEAAKALRHVAAERDLLMDTPDEACIVFYAVPERGECVSKTPTWGGGQNHVLLDLNDQSR 337          
BLAST of Ec-28_002460.2 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 2.860e-108
Identity = 208/355 (58.59%), Postives = 234/355 (65.92%), Query Frame = 0
Query:    1 MRSHRGWEVPQ-SPSCTGTGSQSPSAVLNGPSGADTEQHAA-DLGRARSRRKGRGLV-VSARAGAGEDRPSKEEGQRSTTATTAPGFTRHSFLAGTEGT--TVTNVAAAPSPP---LSPRPSRRRVHHSKTPGTPAASPTPTAARRLSRKNPLAVCLTVVSIAVAVLLVILALAAYGGLWPWRDLFPYRGELFQPDRDCRRVSTGAEVACGSPWSAPCFDRTRCRSGGGRSGRRRARAAXXXXGSTRGAGGGDLLSVYVHDETCSMRKSSEIMASYRGVAVPLLWNEAAKA---------LRHVAAERDLLMDTPDEACIVFYAVP-ERGECVSKTPTWGGGQNHVLLDLNDQSR 337
            M + RGWEVPQ SPS T T SQSPSAVL+GPS    E+HAA D   ARSRR+GR LV ++ +AGA  +               APGFT HSF A T+ T  T TNV AAPSP    LSPR SRRR  H++T  T A SP  T AR   +   +   L VVS+AV  LL+ILAL A  GLWPWRDLFPY+GE FQP +DC  V+T AEVACGSPWSAPCFD +RCRSGGG                       DLLSVYVHDETCSMR SSEIMASY  VA+P  W+ AA+          LRH AAER LL+DTPDEACIVFYAVP ++GECVSKTPTWG GQNH LLDLND+SR
Sbjct:    2 MINPRGWEVPQQSPSSTRTRSQSPSAVLDGPSCCHPEEHAAADFWWARSRRRGRALVEIAGQAGAAAEXXXXXXXXXXXXXXXAPGFTHHSFFAETDTTAVTTTNVTAAPSPTSPLLSPRHSRRRGKHNQTTRTTAVSPAGTVARLFQKNRRI---LAVVSVAVTALLLILALTACAGLWPWRDLFPYKGERFQPAKDCLMVNTRAEVACGSPWSAPCFDLSRCRSGGG-----------------------DLLSVYVHDETCSMRTSSEIMASYGDVAIPPPWDAAAETQLWXXXXXTLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWGEGQNHALLDLNDESR 330          
BLAST of Ec-28_002460.2 vs. uniprot
Match: A0A6H5JXY3_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY3_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 2.000e-87
Identity = 166/272 (61.03%), Postives = 184/272 (67.65%), Query Frame = 0
Query:   81 APGFTRHSFLAGTE--GTTVTNVAAAP---SPPLSPRPSRRRVHHSKTPGTPAASPTPTAARRLSRKNPLAVCLTVVSIAVAVLLVILALAAYGGLWPWRDLFPYRGELFQPDRDCRRVSTGAEVACGSPWSAPCFDRTRCRSGGGRSGRRRARAAXXXXGSTRGAGGGDLLSVYVHDETCSMRKSSEIMASYRGVAVPLLWNEAAKA---------LRHVAAERDLLMDTPDEACIVFYAVP-ERGECVSKTPTWGGGQNHVLLDLNDQSR 337
            APGFTRHSF A T+    T TNV AAP   SP +SPR SRR   H++T  T A SP  T AR L RKN     L V+S+AVA LL+ILAL AY GLWPWRDLFPY+G LF P +DC  V+T AEVACGSPWSAPCFD +RCR GGG S                       LSVYVHDETCSMRK+SEIMASY  VAV   W+ AA+          LR  AAER LL+DTPDEACIVFYAVP ++ ECVSKTPTWGGGQNH LLDLND+SR
Sbjct:    4 APGFTRHSFFAETDVKAATTTNVTAAPRPTSPLMSPRHSRRCGQHNQTTRTAAVSPAGTVAR-LFRKNRRI--LAVISVAVAALLLILALTAYAGLWPWRDLFPYKGVLFHPAKDCLMVNTRAEVACGSPWSAPCFDLSRCRGGGGGS-----------------------LSVYVHDETCSMRKTSEIMASYGDVAVSPPWDAAAETQLXXXXXXXLRLAAAERGLLVDTPDEACIVFYAVPRDKAECVSKTPTWGGGQNHALLDLNDESR 249          
BLAST of Ec-28_002460.2 vs. uniprot
Match: A0A6H5JVE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE6_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.740e-11
Identity = 51/77 (66.23%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    5 RGWEVPQ-SPSCTGTGSQSPSAVLNGPSGADTEQHAA-DLGRARSRRKGRGLVVSARAG-AGEDRPSKEEGQRSTTA 78
            RGWEVPQ SPS T T SQSPSAVL+GPS    E+HAA D+  ARSRR+GRGLV +  AG A EDRP +E GQ  TTA
Sbjct:    6 RGWEVPQQSPSSTRTRSQSPSAVLDGPSCCHPEEHAAADVWWARSRRRGRGLVETGGAGVAAEDRP-EEGGQNFTTA 81          
The following BLAST results are available for this feature:
BLAST of Ec-28_002460.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXN9_ECTSI1.180e-230100.00Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LNT2_ECTSI2.860e-10858.59Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JXY3_9PHAE2.000e-8761.03GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JVE6_9PHAE3.740e-1166.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..337
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..171
NoneNo IPR availableTMHMMTMhelixcoord: 145..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2293439..2297318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002460.2Ec-28_002460.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2293118..2302823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002460.2 ID=Ec-28_002460.2|Name=Ec-28_002460.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=338bp
MRSHRGWEVPQSPSCTGTGSQSPSAVLNGPSGADTEQHAADLGRARSRRK
GRGLVVSARAGAGEDRPSKEEGQRSTTATTAPGFTRHSFLAGTEGTTVTN
VAAAPSPPLSPRPSRRRVHHSKTPGTPAASPTPTAARRLSRKNPLAVCLT
VVSIAVAVLLVILALAAYGGLWPWRDLFPYRGELFQPDRDCRRVSTGAEV
ACGSPWSAPCFDRTRCRSGGGRSGRRRARAARGRGGSTRGAGGGDLLSVY
VHDETCSMRKSSEIMASYRGVAVPLLWNEAAKALRHVAAERDLLMDTPDE
ACIVFYAVPERGECVSKTPTWGGGQNHVLLDLNDQSR*
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