Ec-28_001430.3 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_001430.3
Unique NameEc-28_001430.3
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length224
Homology
[Close]
BLAST of Ec-28_001430.3 vs. uniprot
Match: D8LGW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW0_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 2.350e-156
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0 
Query:    1 MSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFREENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGTTAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQV 220
            MSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFREENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGTTAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQ 
Sbjct:   70 MSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFREENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGTTAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQT 289
[Close]
BLAST of Ec-28_001430.3 vs. uniprot
Match: A0A6H5LF55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF55_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 1.230e-136
Identity = 202/230 (87.83%), Postives = 208/230 (90.43%), Query Frame = 0 
Query:    1 MSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFRE--------ENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGTTAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQVHR 222
            MSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLW SSQATGFGPAARAQGRQSLEQ TVETIARVTESFR+        ENAGGGCPECMTTVLYTHRRR GKED GEGLSDDDQP G TAFTG RTS+ PRK AAR TK+ +ICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRS P+AKHSSWLRDRKRL+ELKAQ  R
Sbjct:   69 MSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWHSSQATGFGPAARAQGRQSLEQGTVETIARVTESFRQGIYIVEKTENAGGGCPECMTTVLYTHRRRPGKEDVGEGLSDDDQPEGATAFTGARTSESPRKEAARRTKNSKICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSCPEAKHSSWLRDRKRLDELKAQTRR 298
The following BLAST results are available for this feature:
BLAST of Ec-28_001430.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGW0_ECTSI2.350e-15699.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LF55_9PHAE1.230e-13687.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47703FAMILY NOT NAMEDcoord: 29..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1356327..1358005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001430.3Ec-28_001430.3Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1351610..1358744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_001430.3 ID=Ec-28_001430.3|Name=Ec-28_001430.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=224bp
MSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDH
RSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFR
EENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGTTAFTGTRTS
KRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPK
AKHSSWLRDRKRLEELKAQVHRR*
back to top