Ec-28_001260.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_001260.2
Unique NameEc-28_001260.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length206
Homology
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BLAST of Ec-28_001260.2 vs. uniprot
Match: A0A6H5JKC4_9PHAE (Post-SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC4_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.700e-93
Identity = 171/199 (85.93%), Postives = 180/199 (90.45%), Query Frame = 0 
Query:    1 MHTPTLARRCGTGWQASGSLIRALPSSRHRLLFTDDLATRPGGEEHGGPPPSTRVAGASIAPKATVTSSSPAWSTYRGAWLSSLAGPNDEYVAGDAAVLVSRGRGGGIGGKGNALALFPVGFSSXXXXXXXXXXXXXXXXXXXXSIDFTVVEDGTEKFLVAARVLEANRAIFARVEGFVTGVSTRHSVQVSKGRHLEAR 199
            MHT TL RRC TGWQASGSLIRAL SSR+RLLFTDDLATRPGGEEHGGPPPSTRV GAS+ PK+ VTSSS AWSTYRGAWLSSLAGPN++YVAGD AV+VS  RGGGIGGKGN LA FPVGFSS  XXXXXXXXXXXXXXXX  S+DFTVV+DGTEKFLVAARVLEAN+AIFARVEG VTGVSTRHSVQVSK RHLEAR
Sbjct:    1 MHTLTLVRRCPTGWQASGSLIRALTSSRNRLLFTDDLATRPGGEEHGGPPPSTRVGGASMVPKSPVTSSSTAWSTYRGAWLSSLAGPNNDYVAGDVAVMVSGERGGGIGGKGNTLAPFPVGFSSRSXXXXXXXXXXXXXXXX--SLDFTVVKDGTEKFLVAARVLEANQAIFARVEGLVTGVSTRHSVQVSKERHLEAR 197
[Close]
BLAST of Ec-28_001260.2 vs. uniprot
Match: A0A6H5K6N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N9_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.230e-42
Identity = 106/197 (53.81%), Postives = 117/197 (59.39%), Query Frame = 0 
Query:    1 MHTPTLARRCGTGWQASGSLIRALPSSRHRLLFTDDLATRPGGEEHGGPPPSTRVAGASIAPKATVTSSSPAWSTYRGAWLSSLAGPNDEYVAGDAAVLVSRGRGGGIGGKGNALALFPVGFSSXXXXXXXXXXXXXXXXXXXXSIDFTVVEDGTEKFLVAARVLEANRAIFARVEGFVTGVSTRHSVQVSKGRHLE 197
            MHT TLARRC TGWQASGSLI AL SSR RLLFTDD ATRPG      P P  R+AGAS+A  A    SSP+   Y GA  SSLA PN+   AG                        PV  S XXXX                  D+TVV+DGTEKF+VAARVLEAN+ +F+RVEG VTGV TRHSVQ+SK RHLE
Sbjct:    3 MHTLTLARRCRTGWQASGSLIGALSSSRSRLLFTDDRATRPG------PTPPPRIAGASMALTADAKPSSPS-PVYPGAGFSSLARPNEFVAAGS-----------------------PVSSSXXXXXS-----------------DYTVVQDGTEKFVVAARVLEANQVLFSRVEGLVTGVKTRHSVQLSKERHLE 152
The following BLAST results are available for this feature:
BLAST of Ec-28_001260.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKC4_9PHAE1.700e-9385.93Post-SET domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6N9_9PHAE2.230e-4253.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1205969..1207152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001260.2Ec-28_001260.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1204146..1216979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_001260.2 ID=Ec-28_001260.2|Name=Ec-28_001260.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=206bp
MHTPTLARRCGTGWQASGSLIRALPSSRHRLLFTDDLATRPGGEEHGGPP
PSTRVAGASIAPKATVTSSSPAWSTYRGAWLSSLAGPNDEYVAGDAAVLV
SRGRGGGIGGKGNALALFPVGFSSSSNSSSSRSSNSSSSSSSNSSIDFTV
VEDGTEKFLVAARVLEANRAIFARVEGFVTGVSTRHSVQVSKGRHLEARN
NRTCV*
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