Ec-28_001250.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_001250.1
Unique Name	Ec-28_001250.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	62

Homology

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BLAST of Ec-28_001250.1 vs. uniprot
Match: D8LGU7_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU7_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 4.500e-39
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query:    1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61
            MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV
Sbjct:    1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61

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BLAST of Ec-28_001250.1 vs. uniprot
Match: D8LGU6_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU6_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 4.570e-31
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0

Query:    1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61
            MEIDM+CPF+CQCGAVRCRG VSGFSNLSR EQ+EYI+GGAT SP LTGAVK WAEEH IV
Sbjct:   44 MEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGIV 104

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BLAST of Ec-28_001250.1 vs. uniprot
Match: A0A6H5JKC4_9PHAE (Post-SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC4_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 8.460e-29
Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 0

Query:    1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61
            MEIDMSCPF+CQCGAVRCRG VSGFSNLSR EQKEYI+GGAT+SP LTGAVK WA+E++IV
Sbjct:  296 MEIDMSCPFDCQCGAVRCRGWVSGFSNLSRAEQKEYIDGGATKSPPLTGAVKTWAQENDIV 356

[Close]

BLAST of Ec-28_001250.1 vs. uniprot
Match: A0A6H5K6N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N9_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.380e-28
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0

Query:    1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNI 60
            MEIDM+CPF+CQCGAVRCRG VSGFSNLSR EQ+EYI+GGAT SP LTGAVK WAEEH I
Sbjct:  203 MEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGI 262

The following BLAST results are available for this feature:

BLAST of Ec-28_001250.1 vs. uniprot

BLAST of Ec-28_001250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LGU7_ECTSI	4.500e-39	100.00	Post-SET domain-containing protein n=1 Tax=Ectocar...	[more]
D8LGU6_ECTSI	4.570e-31	83.61	Post-SET domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JKC4_9PHAE	8.460e-29	83.61	Post-SET domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5K6N9_9PHAE	1.380e-28	83.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003616	Post-SET domain	PROSITE	PS50868	POST_SET	coord: 7..23 score: 8.675

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:1205727..1205912 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_001250.1	Ec-28_001250.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 1205727..1205912 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_001250.1 ID=Ec-28_001250.1|Name=Ec-28_001250.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=62bp
MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGA
VKMWAEEHNIV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003616	Post-SET_dom