Ec-28_001110.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_001110.1
Unique NameEc-28_001110.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length374
Homology
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 1.760e-134
Identity = 306/383 (79.90%), Postives = 311/383 (81.20%), Query Frame = 0
Query:    1 MPLSWPLPSESPSSXXXXXXXXXXXXX------ATLTAPVMPTTRQHSYRQQXXXRRNLLAENAIDGGRETAGSRRASSFRGGGDGGATFSGVDQGTSDENAAEPALVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GPAASFSVPGFFTPRRSLTRRRAPLSPALSASPPAEARSLRSASASSIAGTPRRLSRGFRSASARGDSQLQVVMCSSCGRAGFIQSSEALSSRSAFFCSCGSPVVPASALQLLTATPGETSMSSVAQHTGASPQLVERLPTMQYHENSRKVLAAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSHVTCCGSSSSXXXXXXXXXXXSTFSRG 373
            MPLSWPLP      XXXXXXXXXXXXX        LTA VM  TR +SYRQ XXX RNLLAEN  DGGRETAG                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXX    GPAASFS PGF TPRRSLTRRR PLSPALSASPPAEARSLRSASASSIAGTPRRLSRGFRSASARGDSQLQVVMCSSCGRAGFIQSSEAL+SRS+FFCSCGSPVVPASALQLLTA PG  SMSSV+QHTGASPQLVERLPTMQY E+SRKVL AEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHR CIDEWLGRSVLCPLCNTSVEVAEDSHVTCCGSSSSXXXXXXXXXXXSTFSRG
Sbjct:  621 MPLSWPLPXXXXXXXXXXXXXXXXXXXXXXXAVTALTASVMTATRHYSYRQXXXXXRNLLAENTADGGRETAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAASFSFPGFLTPRRSLTRRRTPLSPALSASPPAEARSLRSASASSIAGTPRRLSRGFRSASARGDSQLQVVMCSSCGRAGFIQSSEALASRSSFFCSCGSPVVPASALQLLTAMPGGISMSSVSQHTGASPQLVERLPTMQYQESSRKVLVAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRVCIDEWLGRSVLCPLCNTSVEVAEDSHVTCCGSSSSXXXXXXXXXXXSTFSRG 1003          
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A7S2Y0A3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.100e-35
Identity = 73/158 (46.20%), Postives = 99/158 (62.66%), Query Frame = 0
Query:  196 ARGDSQLQVVMCSSCGRAGFIQSSEALSSRSAFFCSCGSPVV---PASALQLLTATPGETSMSSVAQHTGASPQLVERLPTMQYHENSRKVLAAEHG---EEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSH 347
            A   + +QVVMC++CGR G +      S+ + F C CG+PV+   P   L L+T   G  ++  V  H GAS +LV  LPT+ +  + +    A+     ++DKVSCRVCLS+Y+ G+ LR+LPC HKFH+ CIDEWL RSV CPLCNTSV+ A   H
Sbjct:   37 AMNSTSVQVVMCTNCGRVGMLPHQ---STTAVFLCPCGTPVLAATPGQLLTLITRGGGLGALEGVHHHQGASKELVALLPTVTHRGDCKAAATAQEAFGEDDDKVSCRVCLSEYQDGECLRVLPCFHKFHKGCIDEWLERSVCCPLCNTSVDKALQQH 191          
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A835ZD21_9STRA (FAD dependent oxidoreductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD21_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 9.080e-17
Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0
Query:  285 AAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWL-GRSVLCPLCNTSVEVAEDSH--VTCCGSS 354
            A E  +EDK+SCRVCL +YEAGD LRILPCLH++H  C+DEWL  RS  CPLCNTSV V    H  + C GS+
Sbjct:  259 AREEVDEDKISCRVCLCEYEAGDELRILPCLHRYHVHCVDEWLVKRSPACPLCNTSVAVVLHGHPGLRCTGSA 331          
BLAST of Ec-28_001110.1 vs. uniprot
Match: D7FJG1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG1_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.630e-14
Identity = 41/98 (41.84%), Postives = 55/98 (56.12%), Query Frame = 0
Query:  259 QHTGASPQLVERLPTMQYHE-------------NSRKVLAAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVA 343
            Q  G   +LVERLP     E             N  +   AE  ++D ++CR+CLSDY+ GD +RILPC H+FH   ID+WL R+V CPLC+  +  A
Sbjct:   75 QGCGLPRELVERLPVTVVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRNVCCPLCHLDISKA 172          
BLAST of Ec-28_001110.1 vs. uniprot
Match: L8HAL1_ACACA (Zinc finger (C3HC4type RING finger) family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAL1_ACACA)

HSP 1 Score: 77.4 bits (189), Expect = 4.350e-14
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 0
Query:  254 MSSVAQHTGASPQLVERLPTMQYHENSRKVLAAEHGEEDK--VSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSH 347
            M SVA     S   V++LPT  +     +    E GE D+   +C +CL +YE G+ L+ LPCLH +H+ECIDEWL  + LCP+C   V  A  ++
Sbjct:    1 MGSVA--IAPSAVTVDQLPTHPFSSAQLRRTGGEGGELDEQLTTCTICLVEYEDGELLKTLPCLHSYHQECIDEWLSGNKLCPICKFDVTTAPSTY 94          
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A7S0QVM1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVM1_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 4.270e-13
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0
Query:  264 SPQLVERLPTMQYHENSRKVLAAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLC 336
            +P  V+ +P ++Y         AE GEE    C +CL D+  GD LR LPC H FH  CIDEWLGR  +CP+C
Sbjct:   45 TPSEVKAIPVVEYE-------GAEEGEEGAELCTICLDDFAKGDQLRRLPCRHHFHVTCIDEWLGRRSMCPVC 110          
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A7S2UST6_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UST6_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.610e-13
Identity = 32/89 (35.96%), Postives = 54/89 (60.67%), Query Frame = 0
Query:  259 QHTGASPQLVERLPTMQYHENSRKVLAAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSH 347
            +H GAS ++++++P   +H +  +  A+     DK  C +CL +++ GD +R L CLH+FH++CID WLG    CP+C   +    +SH
Sbjct:  341 EHRGASQEVIDQIPLQTFHNDDDEKNAS----NDKPVCNICLEEFQTGDEIRKLSCLHRFHKQCIDRWLGTVASCPICKHEIGRNVESH 425          
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A2L2Y4S9_PARTP (RING finger protein 38 (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y4S9_PARTP)

HSP 1 Score: 74.7 bits (182), Expect = 5.320e-13
Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 0
Query:  262 GASPQLVERLPTMQY-----HENSRKVLAAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEV 342
            G     + RLPT QY     +  S   L  +    +K  C+VCLSDYE GDTLRILPC H+FH  CID WL  +  CP+C   V++
Sbjct:   19 GLQKSEINRLPTRQYIAANNNAGSSNELPHKRAGLNK-ECQVCLSDYENGDTLRILPCFHEFHTPCIDPWLKINHTCPVCRVVVDL 103          
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A7J7PSY4_9CHLO (RING-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PSY4_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 5.720e-13
Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 0
Query:  256 SVAQHTGASPQLVERLPTMQYHENSRKVLAAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEV 342
            +V    GA+   ++ LPT           A E     K+SC VCL ++  G  LR LPCLHKFH+ CID WLG+   CP+CN  V++
Sbjct:   38 TVENRKGAAAGTIDSLPTQAVPPGGLLGAAGE-----KLSCAVCLEEFVEGAELRALPCLHKFHKGCIDRWLGQKACCPVCNREVKL 119          
BLAST of Ec-28_001110.1 vs. uniprot
Match: A0A072VSZ0_MEDTR (C3HC4-type RING zinc finger protein n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VSZ0_MEDTR)

HSP 1 Score: 80.9 bits (198), Expect = 7.280e-13
Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 0
Query:  259 QHTGASPQLVERLPTMQYHENSRKVLAAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSV 340
            QHTGAS  L+ RLP        +  +  ++  ED   C VCL     GDT+R LPCLHKFH++CID WLGR   CP+C +S+
Sbjct:  657 QHTGASTNLINRLP--------QSTVQTDNYTED---CAVCLETPVKGDTIRHLPCLHKFHKDCIDPWLGRKSSCPVCKSSI 727          
The following BLAST results are available for this feature:
BLAST of Ec-28_001110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTI9_9PHAE1.760e-13479.90RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2Y0A3_9STRA1.100e-3546.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZD21_9STRA9.080e-1761.64FAD dependent oxidoreductase-domain-containing pro... [more]
D7FJG1_ECTSI1.630e-1441.84RING-type domain-containing protein n=2 Tax=Ectoca... [more]
L8HAL1_ACACA4.350e-1440.63Zinc finger (C3HC4type RING finger) family protein... [more]
A0A7S0QVM1_9CHLO4.270e-1346.58Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S2UST6_9STRA4.610e-1335.96Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A2L2Y4S9_PARTP5.320e-1345.35RING finger protein 38 (Fragment) n=2 Tax=Parastea... [more]
A0A7J7PSY4_9CHLO5.720e-1341.38RING-type domain-containing protein n=1 Tax=Scened... [more]
A0A072VSZ0_MEDTR7.280e-1347.56C3HC4-type RING zinc finger protein n=2 Tax=Medica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 295..337
e-value: 0.0027
score: 12.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 296..336
e-value: 1.6E-8
score: 44.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 295..337
e-value: 1.6E-12
score: 47.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 296..337
score: 12.401
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 250..343
e-value: 4.1E-20
score: 73.2
NoneNo IPR availablePANTHERPTHR46913FAMILY NOT NAMEDcoord: 253..361
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 284..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1069902..1074294 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001110.1Ec-28_001110.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1069902..1074350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_001110.1 ID=Ec-28_001110.1|Name=Ec-28_001110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=374bp
MPLSWPLPSESPSSGAGGGDGGGAPAVATLTAPVMPTTRQHSYRQQQRQR
RNLLAENAIDGGRETAGSRRASSFRGGGDGGATFSGVDQGTSDENAAEPA
LVAPPSPPPRPSHAGGGGGGQGAAAAAAAAAAGPAASFSVPGFFTPRRSL
TRRRAPLSPALSASPPAEARSLRSASASSIAGTPRRLSRGFRSASARGDS
QLQVVMCSSCGRAGFIQSSEALSSRSAFFCSCGSPVVPASALQLLTATPG
ETSMSSVAQHTGASPQLVERLPTMQYHENSRKVLAAEHGEEDKVSCRVCL
SDYEAGDTLRILPCLHKFHRECIDEWLGRSVLCPLCNTSVEVAEDSHVTC
CGSSSSSETSETSASAASTFSRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD