Ec-27_006360.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_006360.1
Unique NameEc-27_006360.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length277
Homology
BLAST of Ec-27_006360.1 vs. uniprot
Match: A0A6H5JU59_9PHAE (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU59_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 4.140e-142
Identity = 224/243 (92.18%), Postives = 230/243 (94.65%), Query Frame = 0
Query:    1 MATEEAKVVDAVPPPPAYYKLFSPGAAIGASLTGQEVGASAA---PGDSAGGAGGTTPNDFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVG 240
            MATEEAKVVDAVPPPPAYYKLFSPGA    SLTGQ+VGASAA   PGDSAGGAGGT PN+FPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRA LKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQA+ENDAVMS LEAAMHQCTSAQE AFSCLGLQE+GAS VAEGE ERA+QGRVEMD+DETIGGAATTAVG
Sbjct:    1 MATEEAKVVDAVPPPPAYYKLFSPGA----SLTGQDVGASAAIAAPGDSAGGAGGTAPNEFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAGLKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAEENDAVMSTLEAAMHQCTSAQESAFSCLGLQEHGASCVAEGERERAQQGRVEMDIDETIGGAATTAVG 239          
BLAST of Ec-27_006360.1 vs. uniprot
Match: D8LAU4_ECTSI (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU4_ECTSI)

HSP 1 Score: 377 bits (967), Expect = 2.010e-130
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query:   74 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVGEGGVAGEGVAASEFGKAGKGKLGAVLAPAVESGNPR 276
            MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVGEGGVAGEGVAASEFGKAGKGKLGAVLAPAVESGNPR
Sbjct:    1 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVGEGGVAGEGVAASEFGKAGKGKLGAVLAPAVESGNPR 203          
BLAST of Ec-27_006360.1 vs. uniprot
Match: A0A6U1QAX8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QAX8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.300e-24
Identity = 69/193 (35.75%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    4 EEAKVVDAVPPPPAYYKLFSPGAAIGASLTGQEVGASAAPGDSAGGAGGTTPNDFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAI-DFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEG 195
            +E +VV A+P PP Y+K F                                  +F L+  RPP P  +Y  FG+PYS+E     L+P EK + P       +FR+E++ LL SIMANY Q +++L+  P++   K+ ++E LFVNFHS+LN++R HQAR +VL RL+ Q K+    ++ LE+ M       EG
Sbjct:    3 DELQVVSALPAPPDYFKRFED-------------------------------ENFQLK--RPPVPEGSYASFGIPYSAEAFIPTLVPDEKKLGPKQDDLDRNFRSEMQKLLQSIMANYVQLLDILIECPSQQSRKVEELEQLFVNFHSILNQFRQHQAREMVLVRLKRQKKDEQKALAMLESQMEAVRQVVEG 162          
BLAST of Ec-27_006360.1 vs. uniprot
Match: H3GJZ4_PHYRM (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJZ4_PHYRM)

HSP 1 Score: 99.4 bits (246), Expect = 2.680e-20
Identity = 51/118 (43.22%), Postives = 80/118 (67.80%), Query Frame = 0
Query:   63 PRPPGPGE-TYRMFGMPYSSEPVEQELLPPEKIVVPASGQA-----IDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKE 174
            P PP P E TY MFG PYS++ V  +LLP +K+  PA  +      +D++AE+K +  S++AN+ + +++L+  PA  +EKL DVE LF+N H+L+N +R HQAR  V++ L++Q +E
Sbjct:  174 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPGKKLYAPAGEEGDEDAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINSFRPHQARETVIQMLKTQVQE 291          
BLAST of Ec-27_006360.1 vs. uniprot
Match: A0A329SFW2_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFW2_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.550e-19
Identity = 51/119 (42.86%), Postives = 79/119 (66.39%), Query Frame = 0
Query:   63 PRPPGPGE-TYRMFGMPYSSEPVEQELLPP--EKIVVP----ASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKE 174
            P PP P E TY MFG PYS++ V  +LLP   +K+  P      G  +D++AE+K +  S++AN+ + +++L+  PA  +EKL DVE LF+N H+L+N +R HQAR  V++ L++Q +E
Sbjct:   34 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPGKKLYAPQGEDGGGAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 152          
BLAST of Ec-27_006360.1 vs. uniprot
Match: A0A6A3XWY7_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XWY7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.550e-19
Identity = 49/119 (41.18%), Postives = 80/119 (67.23%), Query Frame = 0
Query:   63 PRPPGPGE-TYRMFGMPYSSEPVEQELLPP--EKIVVPASGQ----AIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKE 174
            P PP P E TY MFG PYS++ V  +LLP   +K+  P   +    A+D++A++K +  S++AN+ + +++L+  PA  +EKL D+E LF+N H+L+N +R HQAR  V++ L++Q +E
Sbjct:   32 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPGKKVYAPEGDEGDAAAVDYKAQMKKINRSLLANFVELVDVLIKKPAMFNEKLDDIELLFLNMHNLINGFRPHQARETVIQMLKTQVQE 150          
BLAST of Ec-27_006360.1 vs. uniprot
Match: A0A3R7NJF2_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NJF2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.760e-19
Identity = 50/120 (41.67%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   63 PRPPGPGE-TYRMFGMPYSSEPVEQELLPP--EKIVVPAS-----GQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKE 174
            P PP P E TY MFG PYS++ V  +LLP   +K+  PA         +D++A++K +  S++AN+ + +++L+  PA  +EKL DVE LF+N H+L+N +R HQAR  V++ L++Q +E
Sbjct:   35 PSPPEPMEPTYHMFGSPYSTQDVVPDLLPQPDKKLYAPAEDAEGDASVVDYKAQMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 154          
BLAST of Ec-27_006360.1 vs. uniprot
Match: A0A2P4YE96_9STRA (Mediator of RNA polymerase II transcription subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YE96_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.000e-18
Identity = 49/114 (42.98%), Postives = 78/114 (68.42%), Query Frame = 0
Query:   63 PRPPGPGE-TYRMFGMPYSSEPVEQELLP-PEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKE 174
            P PP P E TY MFG PYS++ V  +LLP P++ +       +D++AE+K +  S++AN+ + +++L+  PA  +EKL DVE LF+N H+L+N +R HQAR  V++ L++Q +E
Sbjct:  585 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPDRKLYAQGDDPVDYKAEMKKINRSLLANFVELVDILIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 698          
BLAST of Ec-27_006360.1 vs. uniprot
Match: F0WF41_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF41_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.920e-18
Identity = 55/147 (37.41%), Postives = 87/147 (59.18%), Query Frame = 0
Query:   63 PRPPGP-GETYRMFGMPYSSEPVEQELLPPEKIVVPASG--------QAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCL 200
            P PP P    Y MFG PYS++ V  +LLP +   +  S         QAID++A+LK L  S++AN  Q +++L+ +P   +EK+ D+E LFVN H+L+N++R HQAR ++++ LR Q +E  A ++ +   + +     E A S L
Sbjct:   34 PAPPAPMAPNYHMFGTPYSTKDVVPDLLPDDSKKLYLSDTSAQDPAPQAIDYKAQLKKLNRSLLANCIQLLDVLIRNPKVFNEKVDDLELLFVNMHNLINKFRPHQAREMIIQLLRGQIEEKQAAINDIRRVLIESREQVERAHSAL 180          
BLAST of Ec-27_006360.1 vs. uniprot
Match: A0A024GGG9_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGG9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.730e-18
Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = 0
Query:    7 KVVDAVPPPPAYYKLFSPGAAIGASLTGQEVGASAAPGDSAGGAGGTTPNDFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPE--KIVVPASG------QAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCL 200
            ++V   PPPPA++ L+    A                             D PL PP P  P   Y MFG PYS++ +  +LLP +  K+ +P         Q+ID++A+LK L  S++AN  Q +++L+ +P   +EK+ D+E LFVN H+L+N++R HQAR  ++  L+SQ +E  A +S     + +     E A S L
Sbjct:   34 EIVSEFPPPPAFFSLYQVNNA-----------------------------DAPL-PPAPMAPN--YHMFGTPYSTKDIVPDLLPDDSKKLYLPTLSTQDPKEQSIDYKAQLKKLNRSLLANCIQLLDVLIRNPKLFNEKVDDLELLFVNMHNLINKFRPHQAREHIILMLQSQIEEKQAAISDFRRVLEESREQVERAHSAL 203          
The following BLAST results are available for this feature:
BLAST of Ec-27_006360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU59_9PHAE4.140e-14292.18Mediator of RNA polymerase II transcription subuni... [more]
D8LAU4_ECTSI2.010e-130100.00Mediator of RNA polymerase II transcription subuni... [more]
A0A6U1QAX8_9STRA4.300e-2435.75Mediator of RNA polymerase II transcription subuni... [more]
H3GJZ4_PHYRM2.680e-2043.22Mediator of RNA polymerase II transcription subuni... [more]
A0A329SFW2_9STRA1.550e-1942.86Mediator of RNA polymerase II transcription subuni... [more]
A0A6A3XWY7_9STRA5.550e-1941.18Mediator of RNA polymerase II transcription subuni... [more]
A0A3R7NJF2_9STRA5.760e-1941.67Mediator of RNA polymerase II transcription subuni... [more]
A0A2P4YE96_9STRA1.000e-1842.98Mediator of RNA polymerase II transcription subuni... [more]
F0WF41_9STRA1.920e-1837.41Mediator of RNA polymerase II transcription subuni... [more]
A0A024GGG9_9STRA2.730e-1832.67Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availablePANTHERPTHR21428FAMILY NOT NAMEDcoord: 4..204
IPR009244Mediator complex, subunit Med7PFAMPF05983Med7coord: 12..190
e-value: 2.7E-31
score: 109.1
IPR037212Mediator complex, subunit Med7/Med21-likeSUPERFAMILY140718Mediator hinge subcomplex-likecoord: 103..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5861206..5864070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006360.1Ec-27_006360.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 5861206..5864070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_006360.1 ID=Ec-27_006360.1|Name=Ec-27_006360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=277bp
MATEEAKVVDAVPPPPAYYKLFSPGAAIGASLTGQEVGASAAPGDSAGGA
GGTTPNDFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASG
QAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHS
LLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCL
GLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVGEGGVAGEGVA
ASEFGKAGKGKLGAVLAPAVESGNPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009244Mediatior_Med7
IPR037212Med7/Med21-like