Ec-27_003520.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_003520.1
Unique Name	Ec-27_003520.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	872

Homology

[Close]

BLAST of Ec-27_003520.1 vs. uniprot
Match: A0A6H5K6E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E2_9PHAE)

HSP 1 Score: 906 bits (2342), Expect = 0.000e+0
Identity = 659/831 (79.30%), Postives = 663/831 (79.78%), Query Frame = 0

Query:    1 MVLVRAWVKGELEGILQVGMNAPPVTSRRIRTRRQHVQCVEVNEGCSGLKINDGETMVWCFVTKQGMEKFLLDGKNPTFASLNNKTITIDDWEFSSINVLCPTFDEKKAKANGHICILINKFALFGGERTTTIGKPTDLGEGNRELRAIWRALSNPKDLVRALARGQGLTDLRDIDGVVMNAPDPELQGLSWGDVEPALMVIPTTVSPXXXXXXPQPKEPVGTSAGGMRSPAADRGXXXXXXXXXXXE-----SLLD-MTQQSLGMDYDDGDFGGGDGDFHTQAPSAGNVFSQEEMDMLPASPTPSSPXXXXGTXXXXXXXXXXXXXXXXXXXXXXXA------GSTREETVAGSPDVVPHLVGGDNADEDEPLGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----EGTDPIPVGFTQLDVAPRDGALELSEPRQNGGEKDNGXXXXXXXXXXXXXXXXXXXXXXXIGGSRXXXXXXXXXXXXXXXXXXXXXXXXXHPTNEGNEDNGAAGGGMRAGTXXXXXXXXXXXXXXAATQDSLSPEDILSPQVLSGGTSSSSNVGSPNSSGLGLSCLTQKRQNEGRCHPNSGARNAAEKCDIRSVFRTGGGGGXXXXXXXXSGATAVAGSNQSGQSDSDGSEDDARAAGNRGRAPP------TSRNGTRSSGRRRVGFGFGGRGGGASVLDGPITTTPATATPDTVEMEVEDGPALSALEAAAKKLPVRPLRGGFLSGSRKRSRPLSDVLVALDPEWDGLGPPRVVARGADADEMLAEWLDSSRAARRRPPPLSICAWLDKFAG 809
            MVLVRAWVKGELEGILQ GMNAPPVT RRIRTRRQHVQCVEVNEGCSGLKINDGETMVWCFVTKQGMEKFLLDGKNPTFASLNNKTITIDDWEFS+INVLCP FDEKKAKANGHICILINKFALFGGERTTTIGKPTDLGEGNRELRAIWRALS PKDLVRALARGQGLTDLRDIDGVVMNAPDPE  GLSW DVEPALMV PTTVSP      PQPKEPVGT AGGMRSPAADRG   XXXXXXXX      SLLD MTQQSLGMDYDDGDFGGGDGDFHTQAPSAGNVFSQEEMDM PASPTPSSP    GT   XXXXXXXXXXXXXXXX    A      GSTREETVAGSPDVVPHLVGGDNADEDEP+GQG XXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    EGTDPIPVGFTQLDVAP DGALELSEPRQNGGEKDNGXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXX                                            A  QDSLSPEDILSPQVLSGGTSSSSNVGSPNSSGLGLSCLTQ+RQNEGRCH NSGARNAAEKCDIRSVFRTGG   XXXXXXXX                                         TSRNGTRSSG RR GF           +DGP   TP TATPDTVEMEVEDGPALSALEAAAKKLPVRPLRGG LSGSRKRSRPLSDVLVALDPEWDG GPPRVVARGADADEMLAEWLDSSR ARRRPPPLSICAWLDKFAG
Sbjct:    1 MVLVRAWVKGELEGILQDGMNAPPVTPRRIRTRRQHVQCVEVNEGCSGLKINDGETMVWCFVTKQGMEKFLLDGKNPTFASLNNKTITIDDWEFSTINVLCPAFDEKKAKANGHICILINKFALFGGERTTTIGKPTDLGEGNRELRAIWRALSIPKDLVRALARGQGLTDLRDIDGVVMNAPDPE--GLSWEDVEPALMVRPTTVSPPPPSSQPQPKEPVGTPAGGMRSPAADRGSNGXXXXXXXXXXXXEASLLDDMTQQSLGMDYDDGDFGGGDGDFHTQAPSAGNVFSQEEMDMRPASPTPSSPPTSPGTRGGXXXXXXXXXXXXXXXXRAAAASDVGRAGSTREETVAGSPDVVPHLVGGDNADEDEPVGQGGXXXXXXXXLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTDPIPVGFTQLDVAPGDGALELSEPRQNGGEKDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG------------------------------------------ATIQDSLSPEDILSPQVLSGGTSSSSNVGSPNSSGLGLSCLTQQRQNEGRCHSNSGARNAAEKCDIRSVFRTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRNGTRSSG-RRAGFXXXXXXXXXXAVDGPSAETPDTATPDTVEMEVEDGPALSALEAAAKKLPVRPLRGGSLSGSRKRSRPLSDVLVALDPEWDGSGPPRVVARGADADEMLAEWLDSSRPARRRPPPLSICAWLDKFAG 786

[Close]

BLAST of Ec-27_003520.1 vs. uniprot
Match: D8LBL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL4_ECTSI)

HSP 1 Score: 684 bits (1765), Expect = 1.240e-237
Identity = 483/487 (99.18%), Postives = 483/487 (99.18%), Query Frame = 0

Query:    1 MVLVRAWVKGELEGILQVGMNAPPVTSRRIRTRRQHVQCVEVNEGCSGLKINDGETMVWCFVTKQGMEKFLLDGKNPTFASLNNKTITIDDWEFSSINVLCPTFDEKKAKANGHICILINKFALFGGERTTTIGKPTDLGEGNRELRAIWRALSNPKDLVRALARGQGLTDLRDIDGVVMNAPDPELQGLSWGDVEPALMVIPTTVSPXXXXXXPQPKEPVGTSAGGMRSPAADRGXXXXXXXXXXXESLLDMTQQSLGMDYDDGDFGGGDGDFHTQAPSAGNVFSQEEMDMLPASPTPSSPXXXXGTXXXXXXXXXXXXXXXXXXXXXXXAGSTREETVAGSPDVVPHLVGGDNADEDEPLGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTDPIPVGFTQLDVAPRDGALELSEPRQNGGEKDNGXXXXXXXXXXXXXXXXXXXXXXXIGGSR 487
            MVLVRAWVKGELEGILQVGMNAPPVTSRRIRTRRQHVQCVEVNEGCSGLKINDGETMVWCFVTKQGMEKFLLDGKNPTFASLNNKTITIDDWEFSSINVLCPTFDEKKAKANGHICILINKFALFGGERTTTIGKPTDLGEGNRELRAIWRALSNPKDLVRALARGQGLTDLRDIDGVVMNAPDPELQGLSWGDVEPALMVIPTTVSPXXXXXXPQPKEPVGTSAGGMRSPAADRGXXXXXXXXXXXESLLDMTQQSLGMDYDDGDFGGGDGDFHTQAPSAGNVFSQEEMDMLPASPTPSSPXXXXGTXXXXXXXXXXXXXXXXXXXXXXXAGSTREETVAGSPDVVPHLVGGDNADEDEPLGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTDPIPVGFTQLDVAPRDGALELSEPRQNGGEKDNG    XXXXXXXXXXXXXXXXXXXIGGSR
Sbjct:    1 MVLVRAWVKGELEGILQVGMNAPPVTSRRIRTRRQHVQCVEVNEGCSGLKINDGETMVWCFVTKQGMEKFLLDGKNPTFASLNNKTITIDDWEFSSINVLCPTFDEKKAKANGHICILINKFALFGGERTTTIGKPTDLGEGNRELRAIWRALSNPKDLVRALARGQGLTDLRDIDGVVMNAPDPELQGLSWGDVEPALMVIPTTVSPXXXXXXPQPKEPVGTSAGGMRSPAADRGXXXXXXXXXXXESLLDMTQQSLGMDYDDGDFGGGDGDFHTQAPSAGNVFSQEEMDMLPASPTPSSPXXXXGTXXXXXXXXXXXXXXXXXXXXXXXAGSTREETVAGSPDVVPHLVGGDNADEDEPLGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTDPIPVGFTQLDVAPRDGALELSEPRQNGGEKDNGDEEVXXXXXXXXXXXXXXXXXXXIGGSR 487

The following BLAST results are available for this feature:

BLAST of Ec-27_003520.1 vs. uniprot

BLAST of Ec-27_003520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K6E2_9PHAE	0.000e+0	79.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LBL4_ECTSI	1.240e-237	99.18	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 456..483

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:3038176..3043188 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_003520.1	Ec-27_003520.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 3038042..3045044 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_003520.1 ID=Ec-27_003520.1|Name=Ec-27_003520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=872bp
MVLVRAWVKGELEGILQVGMNAPPVTSRRIRTRRQHVQCVEVNEGCSGLK
INDGETMVWCFVTKQGMEKFLLDGKNPTFASLNNKTITIDDWEFSSINVL
CPTFDEKKAKANGHICILINKFALFGGERTTTIGKPTDLGEGNRELRAIW
RALSNPKDLVRALARGQGLTDLRDIDGVVMNAPDPELQGLSWGDVEPALM
VIPTTVSPPPPSSQPQPKEPVGTSAGGMRSPAADRGSNGGGGGGGGEESL
LDMTQQSLGMDYDDGDFGGGDGDFHTQAPSAGNVFSQEEMDMLPASPTPS
SPPPSPGTRGGGGGGGGGAAGRAAVASDGGRAGSTREETVAGSPDVVPHL
VGGDNADEDEPLGQGGGGQGARAARTGGNEAAGNRTAANGNQPAAAAAAG
GNGKRKREQQQEEGEEEEEEEEEGTDPIPVGFTQLDVAPRDGALELSEPR
QNGGEKDNGDEEVEKEKEEEEEEEEEEEEEERIGGSRRTAPAARAGKAAN
KGKGRAKGKGRAHPTNEGNEDNGAAGGGMRAGTAGTGGGGGGGGGSGAAT
QDSLSPEDILSPQVLSGGTSSSSNVGSPNSSGLGLSCLTQKRQNEGRCHP
NSGARNAAEKCDIRSVFRTGGGGGGSGSGGRRSGATAVAGSNQSGQSDSD
GSEDDARAAGNRGRAPPTSRNGTRSSGRRRVGFGFGGRGGGASVLDGPIT
TTPATATPDTVEMEVEDGPALSALEAAAKKLPVRPLRGGFLSGSRKRSRP
LSDVLVALDPEWDGLGPPRVVARGADADEMLAEWLDSSRAARRRPPPLSI
CAWLDKFAGGGGGGGGGGGGGGDGSGGSGGGGGGAGGGGSNGGARGGSSS
RRSSSRTAGGKFLDEGDGWRC*