Ec-27_003510.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_003510.2
Unique NameEc-27_003510.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length822
Homology
BLAST of Ec-27_003510.2 vs. uniprot
Match: D8LBL5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL5_ECTSI)

HSP 1 Score: 1253 bits (3242), Expect = 0.000e+0
Identity = 715/715 (100.00%), Postives = 715/715 (100.00%), Query Frame = 0
Query:  107 MSLHGGSVFSRLSKQSAIRDTTQLAVHLSNDNAMRRLLRDGVGINEMQKKYLSLCYSARSAVRPNKDVAQSLGGGELVWNLTACEKQETAVIASLLMTKEARIELLSLVISAHEAGRSSSVRKRAGAATTGRRGSLGSRGGGSREMAMERDPVGEVELFNALCKALPQLEALRSLELEGLRKSFEMSKAGGGGPARLARGLARNTGLKSLAVRHVRLTDSRALGALSTAVSVHPSLVALSLRGCGLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVDRDLSPPTRPAAAVAGSGSVVSEISQDSFGXXXXXXXXXXXXXXXXXXXXXXXXAIAAIPTSVQAKTPAERKEEMVREFRRWAGYTACSMRRPGSDGIGLADPSTTEATATAPPASGHEGGTVGRRPGRGRRSTAVLLRAESGAGAPAAEAPSGGGRREGAATGSRAHARPPRARSLXXXXXXXXXXXXXXXXXTRATAGSDCSSAGGGRLAKRNKWSGGACSPGRVREREREQAPGHGKRAALLREKKAPWGAGPGKGEVRERTQAWANAHLADRTGCSGGCSSVGSGSWRSRVRSRKGRVSANGC 821
            MSLHGGSVFSRLSKQSAIRDTTQLAVHLSNDNAMRRLLRDGVGINEMQKKYLSLCYSARSAVRPNKDVAQSLGGGELVWNLTACEKQETAVIASLLMTKEARIELLSLVISAHEAGRSSSVRKRAGAATTGRRGSLGSRGGGSREMAMERDPVGEVELFNALCKALPQLEALRSLELEGLRKSFEMSKAGGGGPARLARGLARNTGLKSLAVRHVRLTDSRALGALSTAVSVHPSLVALSLRGCGLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVDRDLSPPTRPAAAVAGSGSVVSEISQDSFGXXXXXXXXXXXXXXXXXXXXXXXXAIAAIPTSVQAKTPAERKEEMVREFRRWAGYTACSMRRPGSDGIGLADPSTTEATATAPPASGHEGGTVGRRPGRGRRSTAVLLRAESGAGAPAAEAPSGGGRREGAATGSRAHARPPRARSLXXXXXXXXXXXXXXXXXTRATAGSDCSSAGGGRLAKRNKWSGGACSPGRVREREREQAPGHGKRAALLREKKAPWGAGPGKGEVRERTQAWANAHLADRTGCSGGCSSVGSGSWRSRVRSRKGRVSANGC
Sbjct:    1 MSLHGGSVFSRLSKQSAIRDTTQLAVHLSNDNAMRRLLRDGVGINEMQKKYLSLCYSARSAVRPNKDVAQSLGGGELVWNLTACEKQETAVIASLLMTKEARIELLSLVISAHEAGRSSSVRKRAGAATTGRRGSLGSRGGGSREMAMERDPVGEVELFNALCKALPQLEALRSLELEGLRKSFEMSKAGGGGPARLARGLARNTGLKSLAVRHVRLTDSRALGALSTAVSVHPSLVALSLRGCGLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVDRDLSPPTRPAAAVAGSGSVVSEISQDSFGXXXXXXXXXXXXXXXXXXXXXXXXAIAAIPTSVQAKTPAERKEEMVREFRRWAGYTACSMRRPGSDGIGLADPSTTEATATAPPASGHEGGTVGRRPGRGRRSTAVLLRAESGAGAPAAEAPSGGGRREGAATGSRAHARPPRARSLXXXXXXXXXXXXXXXXXTRATAGSDCSSAGGGRLAKRNKWSGGACSPGRVREREREQAPGHGKRAALLREKKAPWGAGPGKGEVRERTQAWANAHLADRTGCSGGCSSVGSGSWRSRVRSRKGRVSANGC 715          
BLAST of Ec-27_003510.2 vs. uniprot
Match: A0A6H5K7P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P8_9PHAE)

HSP 1 Score: 1036 bits (2680), Expect = 0.000e+0
Identity = 614/734 (83.65%), Postives = 623/734 (84.88%), Query Frame = 0
Query:   89 EVCSRLAGIEWGREGIVGMSLHGGSVFSRLSKQSAIRDTTQLAVHLSNDNAMRRLLRDGVGINEMQKKYLSLCY-SARSAVRPNKDVAQSLGGGELVWNLTACEKQETAVIASLLMTKEARIELLSLVISAHEAGRSSSVRKRAGAATTGRRGSLGSRGGGSREMAMERDPVGEVELFNALCKALPQLEALRSLELEGLRKSFEMSKAGGGGPARLARGLARNTGLKSLAVRHVRLTDSRALGALSTAVSVHPSLVALSLRGCGLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVDRDLSPPTRPAAAVAGSGSVVSEISQDSFGXXXXXXXXXXXXXXXXXXXXXXXXAIAAIPTSVQAKTPAERKEEMVREFRRWAGYTACSMRRPGSDGIGLADPSTTEATATAPPASGHEGGTVGRRPGRGRRSTAVLLRAESGAGAPAAEAPSGGGRREGAATGSRAHARPPRARSLXXXXXXXXXXXXXXXXXTRATAGSDCSSAGGGRLAKRNKWSGGACSPGRVREREREQAPGHGKRAALLREKKAPWGAGPGKGEVRERTQAWANAHLADRTGCSGGCSSVGSGSWRSRVRSRKGRVSANGC 821
            EVCSRLAGIEWGREGIVGMSLHGGSVFSRLSKQSAIR+TTQLAVHLSND AMRRLLRDGVGINEMQKKYLSLCY S          VA SLGGGEL+WNLTACEKQETAVIASLLMTKEAR ELLSLVISAHEAGRSSSVRKRAGAATTGRRGS GSRGGGSREMAMERDPVGE                               SKAGGGGPARLARGLARNTGLKSLAVRHVRLTDSR LGALSTA+SVHPSLVALSLRGCGLVGEASGRLV+SVLRAHAARREGLVWS+GLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGD GVHAVARGLQSDTWL+GVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVDRDLSPPTRPAAAVAGSGSVVSEISQDSFGXXXXXXXXX               A AAIPTSVQAKTPAERKEEMVREFRRWAGYT CSMR PG  G GLADPST EATATAPPASGHEGGTVGRRPGRGRRSTAVLLRA SGAGAPAAEAP GGGRREGAAT SRAH         XXXXXXXXXXXXXXXXX             GGRLAKRNKWSGGACS GR  EREREQA    KRAALLREKKAPWG GPGKGEVRERTQAWA+AHLADR       +SVGSGSWR RVRSRKGRVSA+GC
Sbjct:   43 EVCSRLAGIEWGREGIVGMSLHGGSVFSRLSKQSAIRNTTQLAVHLSNDTAMRRLLRDGVGINEMQKKYLSLCYVSFFPTGGALASVAMSLGGGELLWNLTACEKQETAVIASLLMTKEARTELLSLVISAHEAGRSSSVRKRAGAATTGRRGSRGSRGGGSREMAMERDPVGE-------------------------------SKAGGGGPARLARGLARNTGLKSLAVRHVRLTDSRTLGALSTAISVHPSLVALSLRGCGLVGEASGRLVASVLRAHAARREGLVWSSGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDTGVHAVARGLQSDTWLVGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVDRDLSPPTRPAAAVAGSGSVVSEISQDSFGXXXXXXXXXHEFGGATRRGRAASSASAAIPTSVQAKTPAERKEEMVREFRRWAGYTPCSMRGPGPHGTGLADPSTAEATATAPPASGHEGGTVGRRPGRGRRSTAVLLRAGSGAGAPAAEAPWGGGRREGAATSSRAHX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRLAKRNKWSGGACSSGRAPEREREQASEPWKRAALLREKKAPWGVGPGKGEVRERTQAWASAHLADRY------TSVGSGSWRVRVRSRKGRVSASGC 735          
BLAST of Ec-27_003510.2 vs. uniprot
Match: A0A835YYM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM4_9STRA)

HSP 1 Score: 219 bits (557), Expect = 8.440e-57
Identity = 156/414 (37.68%), Postives = 219/414 (52.90%), Query Frame = 0
Query:  168 VRPNKDVAQSLGGGELVWNLTACEKQETAVIASLLMTKEARIELLSLVISAHEAGRSSSVRKRAGAATTGRRGSLG----SRGG-------GSREMAME-RDPVGEVELFNALCKALPQLEALRSLELEGLRKSFEMSK------------------------AGGGGPARLARGLARNTGLKSLAVRHVRLTDSRALGALSTAVSVHPSLVALSLRGCGLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGF----------------SAHTGVDRDLSPPTRPAAAVA 529
            V+P+  + + LG G L WN +  ++ ET V+  LL + EA   L  + +S  +   + S RKR+   +  RR S G    + GG       G+  +A   +DP GE  L +AL  ALP+  AL SLEL+GLR+S   +                         A   G A LARGL  N  L++L+VR+V L D+RALGAL +AV+ HP + AL+L  C + G    R+V +V+RAH+ RR+GL WSAGLRR     G   +AAPA ++ AG L++D+S NRLGDAG   +AR L+ D WL+ ++LA  G++D  AA L  CL  N  LC ++L+ NP +   A   +   L  R ++P A +E+  V  TL SWGF                  H  V+    PP+RP  A A
Sbjct:   40 VKPSAALLKQLGDGALHWNPSTSDRAETLVVCQLLRSPEAWHALTRISLSGGDM-ENYSARKRSSVLSAARRSSRGGAAATAGGVAPKAKFGAAAVAQAGKDPTGEAALLDALSAALPKTTALESLELDGLRRSLGSAXXXXXXXXXXXXXXXXXXXXXXAPPAAPRGVAALARGLRANASLRALSVRNVSLADARALGALCSAVAAHPRIAALALPNCNVRGADGARIVGAVIRAHSNRRDGLSWSAGLRRAR-PRGAATSAAPAALARAGLLSLDVSRNRLGDAGAAELARALRGDAWLVALSLAATGLSDDAAAALQECLSVNQELCLVLLEHNPRLSPAAIAALDATLHER-IVPRAAVEDAAVAATLDSWGFILGGGDAPSLADVEVGMIHVEVEGTPPPPSRPFGAAA 450          
BLAST of Ec-27_003510.2 vs. uniprot
Match: A0A1V9YYF4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYF4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.890e-13
Identity = 71/240 (29.58%), Postives = 112/240 (46.67%), Query Frame = 0
Query:  272 LPQLEALRSLELE-GLRKSFEMSKAGGGGPARLARGLARNTGLKSLAVRHVRLTDSRALGALSTAVSVHPSLVALSLRGCGLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPE----VGHGAERRITEELETRSMMPEAVLEEPEVVLTLASW 506
            +P   ALRS  L  G+ + + M   G         GL     L+S+ +   +L +S  L  +  A+++ P L+ L+L  C L+ +AS R +S +LR    RR+ + WS+ LR                +   GC+ ++LS N+LGDA    + + L +D WL G+NL  N I   G   L+  LQ N+TL  L+L+ N      V    +R + +  E  S      +E P +   L +W
Sbjct:  465 MPMKRALRSKLLRIGIEQPYAMLPDG------YTHGLKAVQTLQSIDLTESKLGNS-GLDIIEDALALQPHLLHLNLTNC-LLNDASARAISRILRVQCQRRDEVYWSSTLRGQI-----------IPVQGEGCMLLNLSKNKLGDATTEILCQALYNDNWLYGLNLNENDIGPRGVLNLAEALQTNSTLTVLLLEDNTNSDARVATFIQRMLIDRQERNSTSMNHPMEHPLLRSVLKAW 685          
The following BLAST results are available for this feature:
BLAST of Ec-27_003510.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBL5_ECTSI0.000e+0100.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K7P8_9PHAE0.000e+083.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYM4_9STRA8.440e-5737.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9YYF4_9STRA5.890e-1329.58Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 401..428
e-value: 2.7
score: 14.1
coord: 339..367
e-value: 0.86
score: 17.6
coord: 429..456
e-value: 43.0
score: 5.6
NoneNo IPR availablePANTHERPTHR24110CENTROSOMAL PROTEIN OF 78 KDAcoord: 263..473
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 267..469
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 257..373
e-value: 7.6E-9
score: 37.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 400..494
e-value: 1.8E-13
score: 52.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:3029610..3038393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003510.2Ec-27_003510.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 3027770..3038899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_003510.2 ID=Ec-27_003510.2|Name=Ec-27_003510.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=822bp
MRVTFSMPCLVTKHHTMVSPSLIFSPLHPSLTSTHWTCCRRVRIRRDVTG
GAFMPTCRMPSSSPFTHALTSTMMYLEPEGYRPTAQRREVCSRLAGIEWG
REGIVGMSLHGGSVFSRLSKQSAIRDTTQLAVHLSNDNAMRRLLRDGVGI
NEMQKKYLSLCYSARSAVRPNKDVAQSLGGGELVWNLTACEKQETAVIAS
LLMTKEARIELLSLVISAHEAGRSSSVRKRAGAATTGRRGSLGSRGGGSR
EMAMERDPVGEVELFNALCKALPQLEALRSLELEGLRKSFEMSKAGGGGP
ARLARGLARNTGLKSLAVRHVRLTDSRALGALSTAVSVHPSLVALSLRGC
GLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARIS
TAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALL
SVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVV
LTLASWGFSAHTGVDRDLSPPTRPAAAVAGSGSVVSEISQDSFGGGGGGS
LGGDGFGGATRRGGAASSAIAAIPTSVQAKTPAERKEEMVREFRRWAGYT
ACSMRRPGSDGIGLADPSTTEATATAPPASGHEGGTVGRRPGRGRRSTAV
LLRAESGAGAPAAEAPSGGGRREGAATGSRAHARPPRARSLSSRSAGAAA
AAAAAVAVTRATAGSDCSSAGGGRLAKRNKWSGGACSPGRVREREREQAP
GHGKRAALLREKKAPWGAGPGKGEVRERTQAWANAHLADRTGCSGGCSSV
GSGSWRSRVRSRKGRVSANGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf