Ec-27_003500.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_003500.1
Unique NameEc-27_003500.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length219
Homology
[Close]
BLAST of Ec-27_003500.1 vs. uniprot
Match: A0A6H5K7P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P8_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 3.100e-95
Identity = 161/186 (86.56%), Postives = 166/186 (89.25%), Query Frame = 0 
Query:    2 GAPSALDVTWDVLDADGYPELTPRRRKELFPVAETEAERPSPPVGRQARGGGXXXXXXXXXXXXXXRTDRVVDMLASLEKAVMDVCKDMWRLEDKVEGSERYTASRGSERVTESSVVTGEGLGREADQGIDGIGVDDGREEVAAQVEAYLSKMWCDAPDGPSDGDAGEGSNIGMVGNAAPSHRQER 187
            GAPSALDVTWDVLDADGYPELTPRRRKELFP+AETEAERPSPPV RQARGGG              RTDRVVDMLASLEKAVMDVCKDMWRLEDKVEGSERYTASRGSERVTESSVV GEGLGRE DQGIDG+GVDDGREEVAAQVEAYLSKMW DAPDGPSD +A +GSNIGMVGNAAPSHRQ+R
Sbjct:  795 GAPSALDVTWDVLDADGYPELTPRRRKELFPMAETEAERPSPPVARQARGGGGRGG----------RTDRVVDMLASLEKAVMDVCKDMWRLEDKVEGSERYTASRGSERVTESSVVAGEGLGREVDQGIDGVGVDDGREEVAAQVEAYLSKMWRDAPDGPSDREAHDGSNIGMVGNAAPSHRQDR 970
[Close]
BLAST of Ec-27_003500.1 vs. uniprot
Match: D8LBL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL6_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 8.610e-68
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MGAPSALDVTWDVLDADGYPELTPRRRKELFPVAETEAERPSPPVGRQARGGGXXXXXXXXXXXXXXRTDRVVDMLASLEKAVMDVCKDMWRLEDKVEGSERYTASRGSERVTESSVVTGEGLGREADQ 129
            MGAPSALDVTWDVLDADGYPELTPRRRKELFPVAETEAERPSPPVGRQARGGGXXXXXXXXXXXXXXRTDRVVDMLASLEKAVMDVCKDMWRLEDKVEGSERYTASRGSERVTESSVVTGEGLGREADQ
Sbjct:    1 MGAPSALDVTWDVLDADGYPELTPRRRKELFPVAETEAERPSPPVGRQARGGGXXXXXXXXXXXXXXRTDRVVDMLASLEKAVMDVCKDMWRLEDKVEGSERYTASRGSERVTESSVVTGEGLGREADQ 129
The following BLAST results are available for this feature:
BLAST of Ec-27_003500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7P8_9PHAE3.100e-9586.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBL6_ECTSI8.610e-68100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:3027770..3029426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003500.1Ec-27_003500.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 3027770..3029426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_003500.1 ID=Ec-27_003500.1|Name=Ec-27_003500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=219bp
MGAPSALDVTWDVLDADGYPELTPRRRKELFPVAETEAERPSPPVGRQAR
GGGGGGGGGGGGGGRGGRTDRVVDMLASLEKAVMDVCKDMWRLEDKVEGS
ERYTASRGSERVTESSVVTGEGLGREADQGIDGIGVDDGREEVAAQVEAY
LSKMWCDAPDGPSDGDAGEGSNIGMVGNAAPSHRQEREDDQEEEEDGGGG
GGGARNRHPRGVAAGRRR*
back to top