Ec-27_003490.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_003490.1
Unique NameEc-27_003490.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length161
Homology
BLAST of Ec-27_003490.1 vs. uniprot
Match: D8LBL7_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL7_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 1.060e-108
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAANGNQGPSRRR 160
            MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAANGNQGPSRRR
Sbjct:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAANGNQGPSRRR 160          
BLAST of Ec-27_003490.1 vs. uniprot
Match: A0A835Z7C9_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C9_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.850e-87
Identity = 125/151 (82.78%), Postives = 143/151 (94.70%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAAN 151
            M+NFLLL+SRQGKTRLTKWY+ Y++KEKAR VREIT+ VLAR  KMCNF+EWRDKKIVYKRYASLFFVAC+D+DDNELITLE+IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVC Q+DDLME+ +++ ++
Sbjct:    1 MLNFLLLVSRQGKTRLTKWYEAYTSKEKARIVREITTLVLARPPKMCNFLEWRDKKIVYKRYASLFFVACVDRDDNELITLEQIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCGQIDDLMEDVRDDGSS 151          
BLAST of Ec-27_003490.1 vs. uniprot
Match: A0A7S4A8C4_9STRA (AP complex subunit sigma n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8C4_9STRA)

HSP 1 Score: 261 bits (667), Expect = 2.350e-87
Identity = 129/160 (80.62%), Postives = 148/160 (92.50%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEE-AANGNQGPSRR 159
            MINFLLL+SRQGKTRLTKWY++Y+AKEKAR VREITSTVLARA KMCNFVEWR+KKI+YKRYASLFF+ C+D +DNELITLE IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDE+F+GGEL ESSKKEVL VC+QMD+LMEE +E+ AA+G+ G  R+
Sbjct:    1 MINFLLLVSRQGKTRLTKWYESYAAKEKARIVREITSTVLARAPKMCNFVEWRNKKIIYKRYASLFFIVCVDAEDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDEIFVGGELCESSKKEVLSVCAQMDELMEEREEDKAASGSSGRVRK 160          
BLAST of Ec-27_003490.1 vs. uniprot
Match: A0A7S2XUT6_9STRA (AP complex subunit sigma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUT6_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.610e-84
Identity = 123/151 (81.46%), Postives = 135/151 (89.40%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAAN 151
            MINF+LLISRQGKTRLTKWY +Y  KEKAR +REITS VL R  KMCNF+EW+DKKIVYKRYASLFFV CID+ DNELITLE IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDELFI GELQES K+EVLR+C QMDD+MEE KE+ +N
Sbjct:    1 MINFMLLISRQGKTRLTKWYDSYGTKEKARIMREITSMVLNRPPKMCNFIEWKDKKIVYKRYASLFFVVCIDKGDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELQESGKREVLRICGQMDDMMEEGKEDVSN 151          
BLAST of Ec-27_003490.1 vs. uniprot
Match: A0A7S2SD76_9STRA (AP complex subunit sigma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD76_9STRA)

HSP 1 Score: 253 bits (647), Expect = 4.210e-84
Identity = 121/153 (79.08%), Postives = 142/153 (92.81%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTY-SAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAANG 152
            MINF+LLISRQGKTRLTKWY++Y S KEKAR VREIT+ VL+R  K+CNF+EWRDKK++YKRYASLFFVAC+D++DNEL+TLE IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFI GELQESSKKEVL VC+QMD++M+E+K+E  +G
Sbjct:   14 MINFMLLISRQGKTRLTKWYESYGSTKEKARIVREITAMVLSRPPKLCNFIEWRDKKVIYKRYASLFFVACVDKEDNELVTLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFINGELQESSKKEVLSVCAQMDEMMDESKDEGTSG 166          
BLAST of Ec-27_003490.1 vs. uniprot
Match: W7T3W8_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3W8_9STRA)

HSP 1 Score: 252 bits (644), Expect = 7.770e-84
Identity = 120/148 (81.08%), Postives = 136/148 (91.89%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEE 148
            MINFLLL+SRQGKTRL+KWY+ Y+ KEKAR +RE+T+ VLARA KMCNF+EWRDKK++YKRYASLFF+A +D  DNELITLE IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFIGG LQESSK EVLRVCSQMD+LMEE K++
Sbjct:    1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148          
BLAST of Ec-27_003490.1 vs. uniprot
Match: A0A7S3LZF2_9STRA (AP complex subunit sigma n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZF2_9STRA)

HSP 1 Score: 243 bits (621), Expect = 4.540e-80
Identity = 114/148 (77.03%), Postives = 137/148 (92.57%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEE 148
            MINF+LL+SRQGKTRL+KW+   +AKEK R VRE+T+TVL+R  KMCNF+EW+DKK++YKRYASLFFVAC+D++DNELI LE+IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGG LQE+SK EVLR+C+ MD++M+E+KEE
Sbjct:   18 MINFILLVSRQGKTRLSKWFVQMTAKEKTRAVRELTATVLSRPPKMCNFIEWQDKKVIYKRYASLFFVACVDKNDNELIVLEQIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQETSKVEVLRICAAMDEMMDESKEE 165          
BLAST of Ec-27_003490.1 vs. uniprot
Match: A0A812YG65_SYMMI (AP complex subunit sigma (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YG65_SYMMI)

HSP 1 Score: 237 bits (604), Expect = 1.100e-77
Identity = 110/147 (74.83%), Postives = 134/147 (91.16%), Query Frame = 0
Query:    2 INFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEE 148
            INF+LL+SRQGKTRLTKW+     K+K R+VRE+T  VL+R  K+CNF+EWRDKK+VYKRYASL+F+AC+D++DNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYI+DELFIGG LQE+SK EVLR+C+ MD++M+E+K+E
Sbjct:    1 INFILLVSRQGKTRLTKWFVQKEPKDKTRSVRELTGMVLSRPPKLCNFLEWRDKKVVYKRYASLYFIACVDKEDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYIMDELFIGGYLQETSKAEVLRICAAMDEMMDESKDE 147          
BLAST of Ec-27_003490.1 vs. uniprot
Match: F0Y8T1_AURAN (AP complex subunit sigma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8T1_AURAN)

HSP 1 Score: 236 bits (603), Expect = 2.190e-77
Identity = 125/176 (71.02%), Postives = 141/176 (80.11%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWR-DKKIVYKRYASLFFVAC--------------------IDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAANGNQG 155
            MINF+LL+SRQGKTRLTKWY++YS KEKAR VRE  +TVLARA KMCNF+EWR DKKIVYKRYASLFF+ C                    +D +DNELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFI GEL+ESSKKEVL +C+QMD++M+E+KEE  NG  G
Sbjct:    1 MINFMLLVSRQGKTRLTKWYESYSTKEKARIVRE--ATVLARAPKMCNFIEWRADKKIVYKRYASLFFICCGDRRRERAPRRRKLKFLPAGVDSEDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELEESSKKEVLSICAQMDEMMDESKEEG-NGKGG 173          
BLAST of Ec-27_003490.1 vs. uniprot
Match: A0A024THD2_9STRA (AP complex subunit sigma n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024THD2_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.020e-76
Identity = 111/148 (75.00%), Postives = 130/148 (87.84%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEE 148
            MI+F+LL+SRQGKTRL+KWY T   K+KAR +RE+T+ VL R  K CNF+EW+D+KIVYKRYASL+FVACI +++NELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEL IGG LQE SKKE+LRVC Q +D MEE+KE+
Sbjct:    1 MIDFMLLVSRQGKTRLSKWYSTVPLKDKARIIREVTTLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEVIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCQQQEDFMEESKED 148          
The following BLAST results are available for this feature:
BLAST of Ec-27_003490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL7_ECTSI1.060e-108100.00AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A835Z7C9_9STRA1.850e-8782.78AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
A0A7S4A8C4_9STRA2.350e-8780.63AP complex subunit sigma n=1 Tax=Pelagomonas calce... [more]
A0A7S2XUT6_9STRA1.610e-8481.46AP complex subunit sigma n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2SD76_9STRA4.210e-8479.08AP complex subunit sigma n=1 Tax=Rhizochromulina m... [more]
W7T3W8_9STRA7.770e-8481.08AP complex subunit sigma n=2 Tax=Monodopsidaceae T... [more]
A0A7S3LZF2_9STRA4.540e-8077.03AP complex subunit sigma n=1 Tax=Spumella elongata... [more]
A0A812YG65_SYMMI1.100e-7774.83AP complex subunit sigma (Fragment) n=1 Tax=Symbio... [more]
F0Y8T1_AURAN2.190e-7771.02AP complex subunit sigma n=1 Tax=Aureococcus anoph... [more]
A0A024THD2_9STRA1.020e-7675.00AP complex subunit sigma n=12 Tax=Saprolegniaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availableGENE3D3.30.450.60coord: 1..154
e-value: 5.1E-62
score: 210.1
NoneNo IPR availablePANTHERPTHR11753:SF5AP COMPLEX SUBUNIT SIGMAcoord: 2..151
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..140
e-value: 1.3E-55
score: 187.2
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..152
e-value: 7.4E-68
score: 225.1
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753CLATHRIN COAT ASSEMBLY PROTEINcoord: 2..151
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:3022287..3026062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003490.1Ec-27_003490.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 3022287..3026062 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_003490.1 ID=Ec-27_003490.1|Name=Ec-27_003490.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=161bp
MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFV
EWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCE
LDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAA
NGNQGPSRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022775AP_mu_sigma_su
IPR016635AP_complex_ssu
IPR011012Longin-like_dom_sf