Ec-27_003420.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_003420.1
Unique NameEc-27_003420.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length999
Homology
BLAST of Ec-27_003420.1 vs. uniprot
Match: D8LBM4_ECTSI (TPR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM4_ECTSI)

HSP 1 Score: 1796 bits (4652), Expect = 0.000e+0
Identity = 998/998 (100.00%), Postives = 998/998 (100.00%), Query Frame = 0
Query:    1 MEDDEADTRAFWDLMQRTTGARSASWDTFSATFETYLRRYYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMRSCLIKAARSLFDESGCLVPWFHGKLSRDEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKRGERRLVTCLINNEGSRGYTLPDTSGDGCWRDLREFVAEQRRGDFQQPVPSALHRECVEEIEARRRAEQFVPTPENQIAYARQLFGEAQTMVYSRDMKAGFEATRILQEALGLVEKVEHILLELEQGQGDPQLQAKALRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRRNDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEEGMALQARQEGDAAPASSGXXXXXXXXXXXXXGFPLRRRGTTPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVHMPSQQGETTPTRDGXXXXXXGMYFQGGAAPASGVCGGDSDDLYLPFQLGRITPPNSGSGRGGNVYSHSRLPGASPVSDGRSAHFMHQGSTPXXXXXXXXXXYSPSQQGATTRTSGGNSGPGGVHLPSRIPGAAPTSSGSGEASGVDVSHLPLQQVRITSPRASXXXXXXMHLPSPLQGAPAXXXXGDASGVDGLYSTPRHDVAALGRSPGGVVGLHAYTQQAPMTGSGVGFPGQQWGAPPARRGGHDGFYMLPQQPGAAPEGTHRIGGEKLYVRPRQHGATXXXXXGGVSISRQPQGVAPEGVRGVGSRARGVCISPEREGRASPVGRRGDGHRGSDGGVAGAGVGRVRDDYVMVSPDRPPPVPQPHYGPYSSR 998
            MEDDEADTRAFWDLMQRTTGARSASWDTFSATFETYLRRYYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMRSCLIKAARSLFDESGCLVPWFHGKLSRDEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKRGERRLVTCLINNEGSRGYTLPDTSGDGCWRDLREFVAEQRRGDFQQPVPSALHRECVEEIEARRRAEQFVPTPENQIAYARQLFGEAQTMVYSRDMKAGFEATRILQEALGLVEKVEHILLELEQGQGDPQLQAKALRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRRNDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEEGMALQARQEGDAAPASSGXXXXXXXXXXXXXGFPLRRRGTTPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVHMPSQQGETTPTRDGXXXXXXGMYFQGGAAPASGVCGGDSDDLYLPFQLGRITPPNSGSGRGGNVYSHSRLPGASPVSDGRSAHFMHQGSTPXXXXXXXXXXYSPSQQGATTRTSGGNSGPGGVHLPSRIPGAAPTSSGSGEASGVDVSHLPLQQVRITSPRASXXXXXXMHLPSPLQGAPAXXXXGDASGVDGLYSTPRHDVAALGRSPGGVVGLHAYTQQAPMTGSGVGFPGQQWGAPPARRGGHDGFYMLPQQPGAAPEGTHRIGGEKLYVRPRQHGATXXXXXGGVSISRQPQGVAPEGVRGVGSRARGVCISPEREGRASPVGRRGDGHRGSDGGVAGAGVGRVRDDYVMVSPDRPPPVPQPHYGPYSSR
Sbjct:    1 MEDDEADTRAFWDLMQRTTGARSASWDTFSATFETYLRRYYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMRSCLIKAARSLFDESGCLVPWFHGKLSRDEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKRGERRLVTCLINNEGSRGYTLPDTSGDGCWRDLREFVAEQRRGDFQQPVPSALHRECVEEIEARRRAEQFVPTPENQIAYARQLFGEAQTMVYSRDMKAGFEATRILQEALGLVEKVEHILLELEQGQGDPQLQAKALRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRRNDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEEGMALQARQEGDAAPASSGXXXXXXXXXXXXXGFPLRRRGTTPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVHMPSQQGETTPTRDGXXXXXXGMYFQGGAAPASGVCGGDSDDLYLPFQLGRITPPNSGSGRGGNVYSHSRLPGASPVSDGRSAHFMHQGSTPXXXXXXXXXXYSPSQQGATTRTSGGNSGPGGVHLPSRIPGAAPTSSGSGEASGVDVSHLPLQQVRITSPRASXXXXXXMHLPSPLQGAPAXXXXGDASGVDGLYSTPRHDVAALGRSPGGVVGLHAYTQQAPMTGSGVGFPGQQWGAPPARRGGHDGFYMLPQQPGAAPEGTHRIGGEKLYVRPRQHGATXXXXXGGVSISRQPQGVAPEGVRGVGSRARGVCISPEREGRASPVGRRGDGHRGSDGGVAGAGVGRVRDDYVMVSPDRPPPVPQPHYGPYSSR 998          
BLAST of Ec-27_003420.1 vs. uniprot
Match: A0A6H5JE26_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE26_9PHAE)

HSP 1 Score: 1374 bits (3556), Expect = 0.000e+0
Identity = 788/1013 (77.79%), Postives = 811/1013 (80.06%), Query Frame = 0
Query:    1 MEDDEADTRAFWDLMQRTTGARSASWDTFSATFETYLRRYYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMRSCLIKAARSLFDESGCLVPWFHGKLSRDEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKRGERRLVTCLINNEGSRGYTLPDTSGDGCWRDLREFVAEQRRGDFQQPVPSALHRECVEEIEARRRAEQFVPTPENQIAYARQLFGEAQTMVYSRD--MKAGFEATRILQEALGLVEKVEHILLELEQGQGDPQLQAKALRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRRNDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEEGMALQARQEGDAAPASSGXXXXXXXXXXXXXG-FPLRRRGTTPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVHMPSQQGETTPTRDGXXXXXXGMYFQGGAAPASGVCGGDSDDLYLPFQLGRITPPNSGSGRGGNVYSHSRLPGASPVSDGR----SAHFMHQGSTPXXXXXXXXXX-------YSPSQQGATTRTSGGNSGPGGVHLPSRIPGAAPTSSGSGEASGVDVSHLPLQQVRITSPRASXXXXXXMHLPSPLQGAPAXXXXGDASGVDGLYSTPRHDVAALGRSPGGVVGLHAYTQQAPMTG-SGVGFPGQQWGAPPARRGGHDGFYMLPQQPGAAPEGTHRIGGEKLYVRPRQHGATXXXXXGGVSISRQPQGVAPEGVRGVGSRARGVCISPEREGRASPVGRRGDGHRGSDGGVAGAGVGRVRDDYVMVSPDRPPPVPQPHYGPYSSR 998
            MEDDEADTRAFWDL+QRTTGARSASWDTFSATFETYLRR+YAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPM+SCLIKAARSLFDESGCLVPWFHGKLSR+EARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRK+GERRLVTCLINNEG RGYTLPDTSGDGCWRDLREFVAEQRRGDF+ PVPSALHRECVEEIEARRRAEQFVPTPENQIA+ARQLFG+AQTMVYSRD  MKAGFEATRIL+ ALGLVEKVEHIL ELEQ QGDPQLQAKALRLGGDILWKLHREE+GVASYLRCL+VVSEAEKV  AS  GSPVVTISVLSH+HQLLAEYFLSRG   RGLDHFSELVACTTDEDAR+QLVDDFRRNDGF+RATAGLTQSSVQE+LDEGISYFRCQDYGPAGVRFEKVLR+ARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQ TERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESE+NV  L RLQERIEEGMALQARQEGDAAPASSGXXXXXXXXXXXXXG FPL                                                    Q          XXXXXX MY QGGAAPASGV GGDSDD YL               RG NVYSHSRLPGA PVS GR     A+ MHQ    XXXXXXXXXX       Y PSQQGATT T+GGNS  G  +             GSGEASGVDVSHLPLQQVRITSP  S      MHLPSPLQGAPA XXX     VDGLYSTPRH VAAL  S GG VGLHAYTQQAPMTG SG GFP QQ GAPPARRGGHD FYMLPQQPGAAP+GTHRIGG +LY R     AT     GGV I RQPQG APEGVRG G RA GVCISPE EG+A                  GAGVG VRDDYVMVSPDRPPPVPQP YGPYSSR
Sbjct:    1 MEDDEADTRAFWDLVQRTTGARSASWDTFSATFETYLRRHYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMKSCLIKAARSLFDESGCLVPWFHGKLSREEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKKGERRLVTCLINNEGRRGYTLPDTSGDGCWRDLREFVAEQRRGDFRHPVPSALHRECVEEIEARRRAEQFVPTPENQIAHARQLFGDAQTMVYSRDRDMKAGFEATRILEGALGLVEKVEHILRELEQDQGDPQLQAKALRLGGDILWKLHREEEGVASYLRCLSVVSEAEKVPDASHDGSPVVTISVLSHIHQLLAEYFLSRGWHERGLDHFSELVACTTDEDARQQLVDDFRRNDGFRRATAGLTQSSVQEVLDEGISYFRCQDYGPAGVRFEKVLRNARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQVTERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEENVLHLARLQERIEEGMALQARQEGDAAPASSGXXXXXXXXXXXXXGGFPL----------------------------------------------------QXXXXXXXXXXXXXXXXXMYLQGGAAPASGVGGGDSDDPYLXXXXXXXXXXXXXXXRGSNVYSHSRLPGALPVSGGRIGGGGAYSMHQXXXXXXXXXXXXXXXXXXXXWYLPSQQGATTPTNGGNSVRGDEYXXXXXXXXXXXXXGSGEASGVDVSHLPLQQVRITSPSTSHSGGSGMHLPSPLQGAPARXXXXXXXXVDGLYSTPRHHVAALA-SGGGGVGLHAYTQQAPMTGGSGFGFPMQQRGAPPARRGGHDSFYMLPQQPGAAPKGTHRIGGGELYFRXXXXXATQEGVYGGVYIPRQPQGAAPEGVRGSGRRAGGVCISPELEGQAXXXXXXXXXXXXX---XVGAGVGGVRDDYVMVSPDRPPPVPQPDYGPYSSR 957          
BLAST of Ec-27_003420.1 vs. uniprot
Match: K8YX09_NANGC (Tpr domain-containing protein (Fragment) n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YX09_NANGC)

HSP 1 Score: 98.6 bits (244), Expect = 3.250e-18
Identity = 78/249 (31.33%), Postives = 133/249 (53.41%), Query Frame = 0
Query:  293 DPQLQAKALRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRR----NDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCI----GEGR--MEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLL 531
            + ++QA+A ++ G +L ++   ++    Y   L+V +    +Q A            L +VH  LA+++LS  +    L+HF +LVA T D   RR+L+ +F R    +D +Q  T G+    + + L++G  ++R + +  A ++F +V++ AR      G+G   +EARALGN ATV     R   +I  YR C +LL +   +  ER++LN L +  IEA R+  A +  E+L  L E + NV+L+
Sbjct:  103 EARMQARAAKVKGTVLQEMGLMKEASVWYE--LSVRAGRRLLQQAPLSEDLRKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDAGDRRRLLREFERLSLEHDFWQDVTPGM----LDQELEQGRRWYREKCWEEAALQFRRVVQLARLASFSSGDGTRMVEARALGNYATVLKDLRRCDESILAYRLCCRLLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNVELV 345          
BLAST of Ec-27_003420.1 vs. uniprot
Match: A0A4D9CYM5_9STRA (SH2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM5_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.510e-16
Identity = 81/258 (31.40%), Postives = 136/258 (52.71%), Query Frame = 0
Query:  293 DPQLQAKALRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRR----NDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCI----GEGR--MEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEE 540
            + ++QA+A ++ G +L ++   ++    Y   L+V +    +Q A            L +VH  LA+++LS  +    L+HF +LVA T D   RR L+ +F R    +D +Q  T G+    + + L++G  ++R + +  A ++F +V++ AR      G+G   +EARALGN ATV     R   +I  YR C +LL +   +  ER++LN L +  IEA R+  A +  E+L  L E + NV   G ++ R+EE
Sbjct:  538 EARMQARAAKVKGTVLQEMGLMKEASVWYE--LSVRAGRRLLQQAPLSEDLSKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDVGDRRLLLREFERLSLEHDFWQDVTPGM----LDQELEQGRRWYREKCWEEAALQFRRVVQLARLASFSSGDGTRMVEARALGNYATVLKDLRRCDESILAYRLCCRLLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNV---GLVKTRLEE 786          
The following BLAST results are available for this feature:
BLAST of Ec-27_003420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBM4_ECTSI0.000e+0100.00TPR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JE26_9PHAE0.000e+077.79SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
K8YX09_NANGC3.250e-1831.33Tpr domain-containing protein (Fragment) n=3 Tax=N... [more]
A0A4D9CYM5_9STRA1.510e-1631.40SH2 domain-containing protein n=1 Tax=Nannochlorop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 112..224
e-value: 4.1E-6
score: 28.6
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 108..203
IPR000980SH2 domainPFAMPF00017SH2coord: 114..186
e-value: 2.0E-4
score: 21.4
IPR000980SH2 domainPROSITEPS50001SH2coord: 114..200
score: 9.173
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 418..532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:2961585..2972786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003420.1Ec-27_003420.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 2961585..2972786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_003420.1 ID=Ec-27_003420.1|Name=Ec-27_003420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=999bp
MEDDEADTRAFWDLMQRTTGARSASWDTFSATFETYLRRYYAAEMSQLPR
ATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMRSCLIKA
ARSLFDESGCLVPWFHGKLSRDEARRAIEEWEASRGNGREQRGVFLFRYS
DWHSTICFSFRRKRGERRLVTCLINNEGSRGYTLPDTSGDGCWRDLREFV
AEQRRGDFQQPVPSALHRECVEEIEARRRAEQFVPTPENQIAYARQLFGE
AQTMVYSRDMKAGFEATRILQEALGLVEKVEHILLELEQGQGDPQLQAKA
LRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVL
SHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRRNDGF
QRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCIGEGRM
EARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVM
CCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEEGMALQARQEG
DAAPASSGGGGGGGGGSGNGSGFPLRRRGTTPTGGGPGGGGGGGGGGMYS
PSRLQGSAPVSSGSGDGHGVGSVHMPSQQGETTPTRDGGGGGSSGMYFQG
GAAPASGVCGGDSDDLYLPFQLGRITPPNSGSGRGGNVYSHSRLPGASPV
SDGRSAHFMHQGSTPPGGGGRGGGGYSPSQQGATTRTSGGNSGPGGVHLP
SRIPGAAPTSSGSGEASGVDVSHLPLQQVRITSPRASNSGGSDMHLPSPL
QGAPASAGSGDASGVDGLYSTPRHDVAALGRSPGGVVGLHAYTQQAPMTG
SGVGFPGQQWGAPPARRGGHDGFYMLPQQPGAAPEGTHRIGGEKLYVRPR
QHGATREGVHGGVSISRQPQGVAPEGVRGVGSRARGVCISPEREGRASPV
GRRGDGHRGSDGGVAGAGVGRVRDDYVMVSPDRPPPVPQPHYGPYSSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036860SH2_dom_sf
IPR000980SH2
IPR011990TPR-like_helical_dom_sf