Ec-27_003370.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_003370.1
Unique NameEc-27_003370.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length686
Homology
BLAST of Ec-27_003370.1 vs. uniprot
Match: D8LBM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM9_ECTSI)

HSP 1 Score: 1008 bits (2607), Expect = 0.000e+0
Identity = 656/656 (100.00%), Postives = 656/656 (100.00%), Query Frame = 0
Query:   30 RLLVVNETGLLKLRAGLGPAGNRFGLGQLPVESLPEVAKVVACTVVRTRRGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNVYPLDGERGSEVDRALRREPQQLVLPYMPVGMAHTTVWRSVAALPNFVGGGXXXXXXXXXXXXXXXXXXXXXXXXXRVRVERGDAVLVWDQSGMVHGYTRWEGGGDRRTXXXXXXXXXXXXXXTXXXXXATGHVSILTAESRESLETLMPELRGIDSPVSCLAFDAVEEGDGWARRRRRVLAGCMESARCVSLHDAASGRRETAVASVPGPVGAVALNARPRFMPYDRHVDDRWGGNVAGFACTELDMLAWLVEGGNAAGAGVGGRWYTGSLPLVEAGGGGGDQVTCMECADFFRDGSTAVAIGTNLGKVIVYSAEPNNGGGEGGLAGGLEEVGRVDAGGRSGGEGLVFGLEVDGDDSSEEDEAGCSSNPVQPPSRRGDSVSPRPSGLASSSADRQFHSRRVADRQGXXXXXXXXXXXRPLLTARWQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHALKMLQPKEDDGGDFMSSASDNDHDGRHEGSRPRGADASGMETHGVGAAASDGAE 685
            RLLVVNETGLLKLRAGLGPAGNRFGLGQLPVESLPEVAKVVACTVVRTRRGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNVYPLDGERGSEVDRALRREPQQLVLPYMPVGMAHTTVWRSVAALPNFVGGGXXXXXXXXXXXXXXXXXXXXXXXXXRVRVERGDAVLVWDQSGMVHGYTRWEGGGDRRTXXXXXXXXXXXXXXTXXXXXATGHVSILTAESRESLETLMPELRGIDSPVSCLAFDAVEEGDGWARRRRRVLAGCMESARCVSLHDAASGRRETAVASVPGPVGAVALNARPRFMPYDRHVDDRWGGNVAGFACTELDMLAWLVEGGNAAGAGVGGRWYTGSLPLVEAGGGGGDQVTCMECADFFRDGSTAVAIGTNLGKVIVYSAEPNNGGGEGGLAGGLEEVGRVDAGGRSGGEGLVFGLEVDGDDSSEEDEAGCSSNPVQPPSRRGDSVSPRPSGLASSSADRQFHSRRVADRQGXXXXXXXXXXXRPLLTARWQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHALKMLQPKEDDGGDFMSSASDNDHDGRHEGSRPRGADASGMETHGVGAAASDGAE
Sbjct:   26 RLLVVNETGLLKLRAGLGPAGNRFGLGQLPVESLPEVAKVVACTVVRTRRGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNVYPLDGERGSEVDRALRREPQQLVLPYMPVGMAHTTVWRSVAALPNFVGGGXXXXXXXXXXXXXXXXXXXXXXXXXRVRVERGDAVLVWDQSGMVHGYTRWEGGGDRRTXXXXXXXXXXXXXXTXXXXXATGHVSILTAESRESLETLMPELRGIDSPVSCLAFDAVEEGDGWARRRRRVLAGCMESARCVSLHDAASGRRETAVASVPGPVGAVALNARPRFMPYDRHVDDRWGGNVAGFACTELDMLAWLVEGGNAAGAGVGGRWYTGSLPLVEAGGGGGDQVTCMECADFFRDGSTAVAIGTNLGKVIVYSAEPNNGGGEGGLAGGLEEVGRVDAGGRSGGEGLVFGLEVDGDDSSEEDEAGCSSNPVQPPSRRGDSVSPRPSGLASSSADRQFHSRRVADRQGXXXXXXXXXXXRPLLTARWQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHALKMLQPKEDDGGDFMSSASDNDHDGRHEGSRPRGADASGMETHGVGAAASDGAE 681          
BLAST of Ec-27_003370.1 vs. uniprot
Match: A0A397SVU6_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SVU6_9GLOM)

HSP 1 Score: 58.9 bits (141), Expect = 1.710e-5
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query:  579 WQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHALKMLQPK 638
            WQR   H + RI   D N DG+ EL+VATQYGVH+ +P+      R  K ++ + +L  K
Sbjct:  323 WQRSFTHPIYRITGLDLNEDGIEELIVATQYGVHILQPNLYKAKERLLKVLNEIDILNKK 382          
BLAST of Ec-27_003370.1 vs. uniprot
Match: UPI001C1CE0F7 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1CE0F7)

HSP 1 Score: 56.2 bits (134), Expect = 2.650e-5
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 0
Query:  579 WQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHALKML 635
            WQR   H + RIA  D N DG+ EL+VATQYGVH+ +P+      +  K +  +  L
Sbjct:  128 WQRSFTHPIYRIASLDLNEDGIEELIVATQYGVHILQPNLSKAKEQLLKVLDEIDNL 184          
BLAST of Ec-27_003370.1 vs. uniprot
Match: A0A2P4PDC6_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=A0A2P4PDC6_RHIID)

HSP 1 Score: 56.2 bits (134), Expect = 9.190e-5
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 0
Query:  579 WQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHALKML 635
            WQR   H + RIA  D N DG+ EL+VATQYGVH+ +P+      +  K +  +  L
Sbjct:  256 WQRSFTHPIYRIASLDLNEDGIEELIVATQYGVHILQPNLSKAKEQLLKVLDEIDNL 312          
The following BLAST results are available for this feature:
BLAST of Ec-27_003370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBM9_ECTSI0.000e+0100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A397SVU6_9GLOM1.710e-541.67Uncharacterized protein n=1 Tax=Glomus cerebriform... [more]
UPI001C1CE0F72.650e-542.11Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A2P4PDC6_RHIID9.190e-542.11Uncharacterized protein n=1 Tax=Rhizophagus irregu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:2936682..2939411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003370.1Ec-27_003370.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 2936682..2940197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_003370.1 ID=Ec-27_003370.1|Name=Ec-27_003370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=686bp
MFTEEQSFAVPSLNSAQCLCSYEDANEQPRLLVVNETGLLKLRAGLGPAG
NRFGLGQLPVESLPEVAKVVACTVVRTRRGDGSGGGGGGGGGGGRTPGIV
CVAMLVPPLPASAAVAVGNHGGGGGGTKQGDAAGGPAVRAAAATAAGGGG
LLNVYPLDGERGSEVDRALRREPQQLVLPYMPVGMAHTTVWRSVAALPNF
VGGGGSGAGEGAGASSSSSPTNNNNNNNRRVRVERGDAVLVWDQSGMVHG
YTRWEGGGDRRTAADSSTSRGGGGGGTGSGGGATGHVSILTAESRESLET
LMPELRGIDSPVSCLAFDAVEEGDGWARRRRRVLAGCMESARCVSLHDAA
SGRRETAVASVPGPVGAVALNARPRFMPYDRHVDDRWGGNVAGFACTELD
MLAWLVEGGNAAGAGVGGRWYTGSLPLVEAGGGGGDQVTCMECADFFRDG
STAVAIGTNLGKVIVYSAEPNNGGGEGGLAGGLEEVGRVDAGGRSGGEGL
VFGLEVDGDDSSEEDEAGCSSNPVQPPSRRGDSVSPRPSGLASSSADRQF
HSRRVADRQGGGGSREQQQQQRPLLTARWQRDLPHGVLRIAFGDFNHDGV
RELVVATQYGVHVFRPDYRAEASRFAKTMHALKMLQPKEDDGGDFMSSAS
DNDHDGRHEGSRPRGADASGMETHGVGAAASDGAE*
back to top