Ec-27_003340.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_003340.2
Unique NameEc-27_003340.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length119
Homology
[Close]
BLAST of Ec-27_003340.2 vs. uniprot
Match: D8LBN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN2_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.220e-51
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0 
Query:    1 MDVLADETPVLAGDPCQNVCIPPTVWVPKLKLPWAKSPSRPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSGXXXXXXXXXXXXXXXXGAKV 102
            MDVLADETPVLAGDPCQNVCIPPTVWVPKLKLPWAKSPSRPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSG XXXXXXXXXXXXXXXGAKV
Sbjct:    1 MDVLADETPVLAGDPCQNVCIPPTVWVPKLKLPWAKSPSRPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSGKXXXXXXXXXXXXXXXGAKV 102
[Close]
BLAST of Ec-27_003340.2 vs. uniprot
Match: A0A6H5KFS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS5_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.130e-44
Identity = 101/119 (84.87%), Postives = 106/119 (89.08%), Query Frame = 0 
Query:    1 MDVLADETPVLAGDPCQNVCIPPTVWVPKLKLPWAKSPSRPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSGXXXXXXXXXXXXXXXXG-AKVCRMRDADRTSFEFCDV 118
            MDVLADETP+LAGDPCQ VC+PPTVW+  LKLPWAKSPSRP M GTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEE     XXXXXXXXXXXXXXXX  A++CRMRDADRTS EFCDV
Sbjct:  318 MDVLADETPLLAGDPCQCVCMPPTVWLLGLKLPWAKSPSRPPMRGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEXXXXXXXXXXXXXXXXXXXXXXXAEICRMRDADRTSVEFCDV 436
The following BLAST results are available for this feature:
BLAST of Ec-27_003340.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBN2_ECTSI1.220e-5199.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFS5_9PHAE1.130e-4484.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:2924075..2925114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003340.2Ec-27_003340.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 2920666..2926058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_003340.2 ID=Ec-27_003340.2|Name=Ec-27_003340.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=119bp
MDVLADETPVLAGDPCQNVCIPPTVWVPKLKLPWAKSPSRPLMYGTRSST
VVLVDAAGRTRVVERNLGSVVGGAGEEGKRSGKKGTVAATAAAAASAAGA
KVCRMRDADRTSFEFCDV*
back to top