Ec-27_002250.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_002250.1
Unique Name	Ec-27_002250.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	542

Homology

[Close]

BLAST of Ec-27_002250.1 vs. uniprot
Match: D8LLD7_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD7_ECTSI)

HSP 1 Score: 1055 bits (2729), Expect = 0.000e+0
Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0

Query:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERILHHLYNEGLKDGPTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQRPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDSQRAREDFESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSASKKAANVYLRFITLWQVAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAASEESSTYAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 541
            MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERILHHLYNEGLKDGPTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQRPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDSQRAREDFESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSASKKAANVYLRFITLWQVAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAASEESSTYAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC
Sbjct:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERILHHLYNEGLKDGPTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQRPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDSQRAREDFESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSASKKAANVYLRFITLWQVAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAASEESSTYAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 541

[Close]

BLAST of Ec-27_002250.1 vs. uniprot
Match: A0A6H5JXQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ3_9PHAE)

HSP 1 Score: 740 bits (1911), Expect = 4.200e-262
Identity = 441/695 (63.45%), Postives = 459/695 (66.04%), Query Frame = 0

Query:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVL-------------------------------DEKDIRLFVEERILHHLYNEGLKDGPT-----------------------------------------------------------------SARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQRPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDSQRAREDFESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKG------------------------------YDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSASKKAANVYLRF------------ITLWQV----------------AGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAASEESSTYAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 541
            M VS DMRLSWLQRWQSMDEDGSNLLDY EFLQAC LRDN+WSWRMFNLLDKNFV V       RG     ++ V                                  K IR    E  +    N G  + PT                                                                  ARARWARSMSPAELSS VK ASKR TKHLAESARDISQSGGAIR+LSARKMADTR WLKVESEMLTEAAKGAARDLEKFGRLKA  TVAVA             RPD ETAR TGKRVGEAAKVGGEKAL+ALRRSFVAITA RYFSEA  D ARG LRR DQQRPTSANL GGDP+VADSG GMLLG DEDSEDSQRARED ESEVPATA EK WDILTDAKAKAEVK+FQERHWA TEKFY NLVTA+ERLEEK+TKEKG                              YDFSADFPKLWC A MR SQGER+IQYRRKRRSSASKKAANV++               T+WQV                AGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLS+GG AASEESST APRHIPSL EMWESAAAAGEGEGTH+HAIIM+K QADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC
Sbjct:    1 MKVSSDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNIWSWRMFNLLDKNFVGVMEAYLGARGFVTAVNRRVAAAAQRQFQTMALAAASKKMQVLNGMSSIGNTTAKKIRRVASESSIGRHLNSGGNERPTVAKPGDVVMKRLKLWTTATSAVDSERPLTTRVERVRATLRRVVSDSDLGNIGKSERSAKFGESLTGARARWARSMSPAELSSSVKTASKRATKHLAESARDISQSGGAIRQLSARKMADTRGWLKVESEMLTEAAKGAARDLEKFGRLKAIATVAVA-------------RPDDETARKTGKRVGEAAKVGGEKALAALRRSFVAITAVRYFSEAVKDAARGGLRRQDQQRPTSANL-GGDPDVADSGYGMLLGGDEDSEDSQRAREDDESEVPATAEEKLWDILTDAKAKAEVKVFQERHWAATEKFYENLVTATERLEEKKTKEKGKYSILNGIVGKKQFLNVTPCLPLRSGYEKRYDFSADFPKLWCVATMRDSQGERKIQYRRKRRSSASKKAANVFMCLGLDVNRQRKREQSTVWQVLASIQNNKLVLQQHQEAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSKGGRAASEESSTNAPRHIPSLMEMWESAAAAGEGEGTHLHAIIMKKVQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC 681

The following BLAST results are available for this feature:

BLAST of Ec-27_002250.1 vs. uniprot

BLAST of Ec-27_002250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LLD7_ECTSI	0.000e+0	100.00	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5JXQ3_9PHAE	4.200e-262	63.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 19..31
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 6..41 score: 8.349
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 12..67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:1956492..1962816 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_002250.1	Ec-27_002250.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 1956492..1962816 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_002250.1 ID=Ec-27_002250.1|Name=Ec-27_002250.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=542bp
MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLL
DKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERILHHLYNEGLKD
GPTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIREL
SARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMR
ALAEAARQRPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYF
SEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDS
QRAREDFESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANL
VTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSS
ASKKAANVYLRFITLWQVAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGS
LSTLSRGGTAASEESSTYAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMR
KAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVPMPIC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair