Ec-27_002200.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_002200.2
Unique NameEc-27_002200.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length174
Homology
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BLAST of Ec-27_002200.2 vs. uniprot
Match: A0A6H5JRV7_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV7_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 1.340e-53
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0 
Query:    1 MSAVPSFDTTSLEDLVALAQAQGLHVEDETDRDHVVGLVQASVVADLAEGEVTGGSGDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPSPPRHLSPMSFGSPLPGAPPPQRLSDILALDGMMGRPSHGDASSSVCAAVRGR 149
            MSAVPSFDTTSLEDLVALAQAQGLHVEDETDRDHVVGLVQASVVADLAEGE+TGGSGDAS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX STPSPPRHLSPMSFGSPLPGAPPPQRLSDILALDGM+GRPS+GDASSSVC  V  R
Sbjct:    1 MSAVPSFDTTSLEDLVALAQAQGLHVEDETDRDHVVGLVQASVVADLAEGELTGGSGDASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-STPSPPRHLSPMSFGSPLPGAPPPQRLSDILALDGMIGRPSYGDASSSVCTEVGSR 148
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BLAST of Ec-27_002200.2 vs. uniprot
Match: D8LLD2_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD2_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 3.760e-5
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:    1 MSAVPSFDTTSLEDLVALAQAQGLHVE 27
            MSAVPSFDTTSLEDLVALAQAQGLHVE
Sbjct:    1 MSAVPSFDTTSLEDLVALAQAQGLHVE 27
The following BLAST results are available for this feature:
BLAST of Ec-27_002200.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRV7_9PHAE1.340e-5393.29UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLD2_ECTSI3.760e-5100.00UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:1892369..1901968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_002200.2Ec-27_002200.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 1890668..1905723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_002200.2 ID=Ec-27_002200.2|Name=Ec-27_002200.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=174bp
MSAVPSFDTTSLEDLVALAQAQGLHVEDETDRDHVVGLVQASVVADLAEG
EVTGGSGDASAAAAASAADERLKGGGGAGGGGGGGEGGGGGPSSTPSPPR
HLSPMSFGSPLPGAPPPQRLSDILALDGMMGRPSHGDASSSVCAAVRGRL
TFNVAALFWGPVPMQVGIPYPCA*
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