Ec-00_004250.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_004250.1
Unique NameEc-00_004250.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length55
Homology
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BLAST of Ec-00_004250.1 vs. uniprot
Match: D8LKZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ3_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.660e-29
Identity = 49/54 (90.74%), Postives = 49/54 (90.74%), Query Frame = 0 
Query:    1 MDKKPHGATGGGDQDVPFEDPEDAVGFGARRLLQRLPTKTYCTAGNQRPAHGFR 54
            MDK PHGATGG DQD PFEDPEDAVGFGARRLLQRLPTKT CTAGNQRPAHG R
Sbjct:    1 MDKNPHGATGGDDQDAPFEDPEDAVGFGARRLLQRLPTKTCCTAGNQRPAHGLR 54
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BLAST of Ec-00_004250.1 vs. uniprot
Match: D8LMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM4_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 9.360e-23
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 
Query:    1 MDKKPHGATGGGDQDVPFEDPEDAVGFGARRLLQRLPTKTYCTAGNQ 47
            MDK PHGATGG DQD PFEDPEDAVGFGARRLLQRLPTKTY TAGNQ
Sbjct:    1 MDKNPHGATGGDDQDAPFEDPEDAVGFGARRLLQRLPTKTYGTAGNQ 47
The following BLAST results are available for this feature:
BLAST of Ec-00_004250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKZ3_ECTSI2.660e-2990.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMM4_ECTSI9.360e-2391.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:5685368..5688476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004250.1Ec-00_004250.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 5685368..5688476 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_004250.1 ID=Ec-00_004250.1|Name=Ec-00_004250.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=55bp
MDKKPHGATGGGDQDVPFEDPEDAVGFGARRLLQRLPTKTYCTAGNQRPA
HGFR*
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