Ec-00_004060.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_004060.2
Unique NameEc-00_004060.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length138
Homology
BLAST of Ec-00_004060.2 vs. uniprot
Match: A0A6H5KHW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.610e-22
Identity = 63/103 (61.17%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    5 LRPAWSALSIWAALLVALAVALPAAPVGIPASTLAPVSRVQQSTLALYAGMEDG-------AADIDPHEPSDDGDSDDEFDLVPKSRARYAANSHNAGLNTRG 100
            LR AWSAL +WA LLVALAVALPAAPVG+P  T   VS VQQSTLAL+AG ED         + +DP E SDD D D EFD+ P  +  YAANSH  GLN RG
Sbjct:    3 LRAAWSALFVWATLLVALAVALPAAPVGVPPCTSVYVSLVQQSTLALHAGTEDSELGMEGSGSYVDPKEASDDEDDDAEFDMGPSYKPLYAANSHR-GLNMRG 104          
BLAST of Ec-00_004060.2 vs. uniprot
Match: A0A6H5L207_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L207_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 6.130e-19
Identity = 65/108 (60.19%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    1 MGRHLRPAWSALSIWAALLVALAVALPAAPVGIPASTLA-PVSRVQQSTLALYA-------GMEDGAADIDPHEPSDDGDSDDEFDLVPKSRARYAANSHNAGLNTRG 100
            M R  R AWS+LSIWAALLVALAVALPAAPV IPA T A  VS  Q ST A+ A       GMED  + IDP  PSDD D D EFD+    +  YAANS  AG NTRG
Sbjct:    1 MRRPPRNAWSSLSIWAALLVALAVALPAAPVAIPARTWALAVSLRQPSTYAMNAATEDSELGMEDSGSAIDPSVPSDDED-DCEFDMGASYKPMYAANSLQAGYNTRG 107          
BLAST of Ec-00_004060.2 vs. uniprot
Match: A0A6H5K756_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K756_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.720e-16
Identity = 61/108 (56.48%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    1 MGRHLRPAWSALSIWAALLVALAVALPAAPVGIPASTLA--------PVSRVQQSTLALYAGMEDGAADIDPHEPSDDGDSDDEFDLVPKSRARYAANSHNAGLNTRG 100
            M R  RPAW ALSIWAALLVALAVALPAAPV IPA T A        P   V  +T     GMED    IDP   +DD D D EFD+    +  YAANSH AG NTRG
Sbjct:    1 MRRPPRPAWFALSIWAALLVALAVALPAAPVAIPARTSALAVSLRQPPPPAVNAATEDSELGMEDSGYAIDPSVLTDDED-DCEFDMGASYKPIYAANSHKAGHNTRG 107          
The following BLAST results are available for this feature:
BLAST of Ec-00_004060.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHW0_9PHAE3.610e-2261.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L207_9PHAE6.130e-1960.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K756_9PHAE1.720e-1656.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..137
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.863
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:5037270..5037683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004060.2Ec-00_004060.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 5034697..5037871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_004060.2 ID=Ec-00_004060.2|Name=Ec-00_004060.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=138bp
MGRHLRPAWSALSIWAALLVALAVALPAAPVGIPASTLAPVSRVQQSTLA
LYAGMEDGAADIDPHEPSDDGDSDDEFDLVPKSRARYAANSHNAGLNTRG
QLGTINNSGSSTPPQHHRSRRRLGRPRVSGDNRCICG*
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