Ec-00_003930.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_003930.2
Unique NameEc-00_003930.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length165
Homology
[Close]
BLAST of Ec-00_003930.2 vs. uniprot
Match: D7FVS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVS2_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 3.680e-45
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 
Query:   17 MAVEDEACNAEEPDVDDDVETDLSSVRNVSGGSDPPARASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSRKTSDHDNVRHDPGTLWWFSAELRQAQSSSTCFRSIWRNT 164
            MAVEDEACNAEEPDVDDDVETDLSSVRNVSGGSDPPARASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSRKTSDHDNVRHDPGTLWWFSAELRQAQSSSTCFRSIWRNT
Sbjct:    1 MAVEDEACNAEEPDVDDDVETDLSSVRNVSGGSDPPARASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSRKTSDHDNVRHDPGTLWWFSAELRQAQSSSTCFRSIWRNT 148
[Close]
BLAST of Ec-00_003930.2 vs. uniprot
Match: D7FJ81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ81_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 4.260e-6
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:   26 AEEPDVDDDVETDLSSVRNVSGGSDPPARASESV 59
            AEEP VDDDVE DLSSVRNVS GSDP ARAS+SV
Sbjct:   54 AEEPFVDDDVEADLSSVRNVSAGSDPSARASKSV 87
[Close]
BLAST of Ec-00_003930.2 vs. uniprot
Match: D7G0S0_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S0_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 9.800e-6
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0 
Query:   27 EEPDVDDDVETDLSSVRNVSGGSDPPARASESV 59
            EEP+VDDDVE DLSSVRNVS GSDP ARAS+SV
Sbjct:   46 EEPNVDDDVEADLSSVRNVSAGSDPSARASKSV 78
The following BLAST results are available for this feature:
BLAST of Ec-00_003930.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVS2_ECTSI3.680e-45100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ81_ECTSI4.260e-685.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S0_ECTSI9.800e-684.85Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4509422..4511439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003930.2Ec-00_003930.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 4508854..4511439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_003930.2 ID=Ec-00_003930.2|Name=Ec-00_003930.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=165bp
MCGHHRGRRLRELRSKMAVEDEACNAEEPDVDDDVETDLSSVRNVSGGSD
PPARASESVVSGGGARRQSTGTAPQGSSSQTVPAPSTRRQSAPPVAGAGS
GSGGGSSSAAPAASSAATSSQSTSRKTSDHDNVRHDPGTLWWFSAELRQA
QSSSTCFRSIWRNT*
back to top