Ec-00_003760.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_003760.1
Unique Name	Ec-00_003760.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	221

Homology

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BLAST of Ec-00_003760.1 vs. uniprot
Match: D7G0S0_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S0_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 1.220e-60
Identity = 168/210 (80.00%), Postives = 168/210 (80.00%), Query Frame = 0

Query:   11 EEPNVDDDVEADLSSVRNVSAGSDPSARASKSVVSGGGAGRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRRTSGTFGEITPSRPAAASGFGXXXXXXXXXXXXXXXXSDREIMITSAMTPAEAMAHVMVVLGGAAAGPIFIYMLQKHMEEHVERCVKVALTVRSLVIAVVEYNVVLMLLKY 220
            EEPNVDDDVEADLSSVRNVSAGSDPSARASKSV      GRQ                                XXXXXXXXXXXXXXXXXXXXXXTSRRTSGTFGEITPSRPAAASGFGXXXXXXXXXXXXXXXX DREI ITSAMTPAEAMA VMVVLGGAAAGPIFIYMLQKHMEEHVER VKVALTVRSLVIAVVEYNVVLMLLKY
Sbjct:   46 EEPNVDDDVEADLSSVRNVSAGSDPSARASKSV------GRQSTGAAPQGSSSQTVPAPSTRRKSAPPVTGAGSXXXXXXXXXXXXXXXXXXXXXXTSRRTSGTFGEITPSRPAAASGFGXXXXXXXXXXXXXXXXXDREITITSAMTPAEAMARVMVVLGGAAAGPIFIYMLQKHMEEHVERFVKVALTVRSLVIAVVEYNVVLMLLKY 249

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BLAST of Ec-00_003760.1 vs. uniprot
Match: D7FJ81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ81_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 3.490e-11
Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 0

Query:   10 AEEPNVDDDVEADLSSVRNVSAGSDPSARASKSVVSGGGAGRQ 52
            AEEP VDDDVEADLSSVRNVSAGSDPSARASKSVVSGGGA RQ
Sbjct:   54 AEEPFVDDDVEADLSSVRNVSAGSDPSARASKSVVSGGGACRQ 96

[Close]

BLAST of Ec-00_003760.1 vs. uniprot
Match: D7FVS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVS2_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.310e-9
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 0

Query:    1 MAVEDEAPNAEEPNVDDDVEADLSSVRNVSAGSDPSARASKSV 43
            MAVEDEA NAEEP+VDDDVE DLSSVRNVS GSDP ARAS+SV
Sbjct:    1 MAVEDEACNAEEPDVDDDVETDLSSVRNVSGGSDPPARASESV 43

The following BLAST results are available for this feature:

BLAST of Ec-00_003760.1 vs. uniprot

BLAST of Ec-00_003760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G0S0_ECTSI	1.220e-60	80.00	Uncharacterized protein n=3 Tax=Ectocarpus silicul...	[more]
D7FJ81_ECTSI	3.490e-11	95.35	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FVS2_ECTSI	2.310e-9	86.05	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 184..194
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 195..218
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 162..183
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..161
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 219..220
None	No IPR available	TMHMM	TMhelix		coord: 199..218
None	No IPR available	TMHMM	TMhelix		coord: 162..184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:4080859..4083144 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_003760.1	Ec-00_003760.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 4080859..4083144 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_003760.1 ID=Ec-00_003760.1|Name=Ec-00_003760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=221bp
MAVEDEAPNAEEPNVDDDVEADLSSVRNVSAGSDPSARASKSVVSGGGAG
RQSTGAAPQGSSSQTVPAPSTRRQSAPPVTGAGSGSGGGSSSAAPAASSA
ATSSQSTSRRTSGTFGEITPSRPAAASGFGSGAAPVAADAASGSGSSDRE
IMITSAMTPAEAMAHVMVVLGGAAAGPIFIYMLQKHMEEHVERCVKVALT
VRSLVIAVVEYNVVLMLLKY*