Ec-00_003710.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_003710.2
Unique NameEc-00_003710.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length111
Homology
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BLAST of Ec-00_003710.2 vs. uniprot
Match: D7G7U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U5_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.860e-48
Identity = 80/107 (74.77%), Postives = 83/107 (77.57%), Query Frame = 0 
Query:    4 GTARRSMLAYLKTSLCVATPPLYTRHEEQHHNSPSGRQPGHRHHADDSXXXXXXXXXXXXXXXXXXXXXTTSPCGDRSIDDRSSTDAGDAVFDSFGDMCISPSGRTF 110
             ++ + MLAYLKTSLCVATPPLYTRHEEQHHNSPSGRQPGHRHHADDS                     TTSPCGDRSIDDRSSTDAGDAVFDSFGDMCISPSGRTF
Sbjct:   56 NSSSQCMLAYLKTSLCVATPPLYTRHEEQHHNSPSGRQPGHRHHADDSSPSGRNHQRPSQHSPQSLSGRTTSPCGDRSIDDRSSTDAGDAVFDSFGDMCISPSGRTF 162
The following BLAST results are available for this feature:
BLAST of Ec-00_003710.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7U5_ECTSI1.860e-4874.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3984875..3985207 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003710.2Ec-00_003710.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 3984633..3985384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_003710.2 ID=Ec-00_003710.2|Name=Ec-00_003710.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=111bp
MPTGTARRSMLAYLKTSLCVATPPLYTRHEEQHHNSPSGRQPGHRHHADD
SSPSGRNHQRPSQHSPQSPSGRTTSPCGDRSIDDRSSTDAGDAVFDSFGD
MCISPSGRTF*
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