Ec-00_002720.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_002720.1
Unique NameEc-00_002720.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length135
Homology
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BLAST of Ec-00_002720.1 vs. uniprot
Match: D7FLX3_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX3_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 6.920e-22
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    1 MEAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARGRFDE 44
            MEAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARGRFDE
Sbjct:    1 MEAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARGRFDE 44
The following BLAST results are available for this feature:
BLAST of Ec-00_002720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLX3_ECTSI6.920e-22100.00TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 66..86
score: 50.0
coord: 101..122
score: 30.45
coord: 22..39
score: 48.33
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 68..101
e-value: 0.0029
score: 26.8
coord: 26..59
e-value: 0.45
score: 19.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..134
e-value: 3.6E-44
score: 152.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 22..131
NoneNo IPR availablePFAMPF13374TPR_10coord: 110..134
e-value: 4.6E-4
score: 20.0
NoneNo IPR availablePFAMPF13424TPR_12coord: 29..99
e-value: 2.6E-18
score: 66.1
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..133
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 26..101
score: 12.158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2884715..2886244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002720.1Ec-00_002720.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 2884715..2886244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_002720.1 ID=Ec-00_002720.1|Name=Ec-00_002720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=135bp
MEAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARGRFDEAETLFR
EALGINERAHGNRHPEVASCLNSLAALLQARGSYDEAEILFTRALEVDEA
CFGLEHPRVAAGLHNLAALLQAQGKHEEADRLQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom