Ec-00_001950.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001950.1
Unique NameEc-00_001950.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length1947
Homology
BLAST of Ec-00_001950.1 vs. uniprot
Match: D8LEE2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE2_ECTSI)

HSP 1 Score: 2851 bits (7390), Expect = 0.000e+0
Identity = 1869/1912 (97.75%), Postives = 1869/1912 (97.75%), Query Frame = 0
Query:   35 MAVVAGTTLLILRPIKHTAALRPDARPANPPADPFRSQYCNSGRRRGGVALASSPATVRMTATAGGGATTHIGSIKDCASGRRGAGLTTSATATLASRVSLGMQGGGLQKRAWRAAGRRPVAPLCMSQTSPPVFQPQQAGDRKDSXXXXXXXXXXXXXXXXXXXXSNGQGAADVRQQPAVVSLHQHHRHNHHPVPVVDVHGSASPLNGHHTAAGAVASSPVAAEPAPPPRVADDIAAMKALGKEGKWREAVAVLSQLKEDASAASNGDGSDLAPNLAVYNXXXXXXXXXXXXXXXXXXXEEMRSAGVQPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGCSCGPXXXXXXXXXXGEVERALRLLEEMAADPRPEAQPEALSYTLVLKACGREGRWETALQLLTEMQAKGLEPTVLSFRYALTACASSSSSRGVSGGSGEEDFAGVWERCRSLMDAMGRLGLEPDRLCYKQAVDAAAKAGDVGAALDLMDGMENCEGFRGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRPNTVVYNTLLALCRGKPLRGVRGGXXXXXXXXXXXXXXXXXDGTGPNLNGYGGXGGLEEVNGHGVAVGMPDGRAIRNGVSVPGGGTVGSRERPDELVGTAVALLHEMTVGGSECAPDKMSFELVMQACVNAGRPESALKVFRAMARVAAGXXXXXXXXXXXXXXXXXXGRGRAVEVRPDRATFRLGLTAAAEAGDGPAAAVLLEEMRDAGIAMDESAFHLAATAFGRAGLWRQGVRVAVVAAEQGIALAPTTLTSILGACAKQARWREALGLLQGTRPVLQQGLSSLPLSTGAGVVAGNERRGEGNVVAAYTLAMVACRRSGRHSEGLRVLEMLEEDGGVGDEAFFRVALKCCAKAGGVGERGDCSGAAVADRVLEGMSAQGIRCGVEGFTDIAQAYGLAGRWEDALALLPRAAALAAVPDERMYCSVINAMGESGAWEAAVELIQSMRRRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEPPPPGRAAYGCACRACARKGEWGAVLGLIEDMREDGLERDSSVYASAMRAFVEAGDWERAVEIVTVEMERDGVSPDALSFGQALRACRAGADGSGRAAQLALALVGEVRSRGLEPGVVILESAARACLADDRPELALDIVSETLDSWRRGSLGGDGDGGGGRRWGIDEVQRLETMRITVLGRLGRWEDSLEALDAMRAKFGDDDLDERAFVSAARACAAAGEWSLIQVLQSEASAVGDGDGVSPGSAWDMQRALLSGLTTAGMWRRAMGMLREMHHGGGGDTVMPAAGEERGQGMPDPSPHWQRRMFKDHRSVMHACLRAGAWDKALSVWSDLRSIVEGPIPCGRTYTAALRACGPLGLWATARDLLSEMRDGAEGAEGDGLLLLPEARHYAFAVSAATVADDISSYEEATLSGRGGWGAGGSDAVVDGDGGSGNAALRSVLSDMAAGGGGGVEIGWETYAAVCWARSQRKQWHRASLGVLELMGEHGFGDGALGTEEAAEGMRSLYRRLLAAASKIPRFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAAAATAFARAGDWEGARDIAVRFDPRVGGPTAGGASSGTGEPSAVRRRTADAAAVVSVAVAATARAGELVEAEALAELARVIATTAEVSASSSGXXXXXXXSRSRGSDGEEARVSRGTERSNNPLGFDHRAGVALADAYERAGRLSDAEGLRSRLQGRMASSLGLEEAAGVEGGVAAAPAASAVPRLPSVGGHSRRRRPLAEGDESTWPXXXXXXXXXXXYDLFLQWMATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGPPRESDEEGLTIRELEGW 1946
            MAVVAGTTLLILRPIKHTAALRPDARPANPPADPFRSQYCNSGRRRGGVALASSPATVRMTATAGGGATTHIGSIKDCASGRRGAGLTTSATATLASRVSLGMQGGGLQKRAWRAAGRRPVAPLCMSQTSPPVFQPQQAGDRKDSXXXXXXXXXXXXXXXXXXXXSNGQGAADVRQQPAVVSLHQ                                           PRVADDIAAMKALGKEGKWREAVAVLSQLKEDASAASNGDGSDLAPNLAVYNXXXXXXXXXXXXXXXXXXXEEMRSAGVQPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGCSCGPXXXXXXXXXXGEVERALRLLEEMAADPRPEAQPEALSYTLVLKACGREGRWETALQLLTEMQAKGLEPTVLSFRYALTACASSSSSRGVSGGSGEEDFAGVWERCRSLMDAMGRLGLEPDRLCYKQAVDAAAKAGDVGAALDLMDGMENCEGFRGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRPNTVVYNTLLALCRGKPLRGVRGGXXXXXXXXXXXXXXXXXDGTGPNLNGYGGXGGLEEVNGHGVAVGMPDGRAIRNGVSVPGGGTVGSRERPDELVGTAVALLHEMTVGGSECAPDKMSFELVMQACVNAGRPESALKVFRAMARVAAGXXXXXXXXXXXXXXXXXXGRGRAVEVRPDRATFRLGLTAAAEAGDGPAAAVLLEEMRDAGIAMDESAFHLAATAFGRAGLWRQGVRVAVVAAEQGIALAPTTLTSILGACAKQARWREALGLLQGTRPVLQQGLSSLPLSTGAGVVAGNERRGEGNVVAAYTLAMVACRRSGRHSEGLRVLEMLEEDGGVGDEAFFRVALKCCAKAGGVGERGDCSGAAVADRVLEGMSAQGIRCGVEGFTDIAQAYGLAGRWEDALALLPRAAALAAVPDERMYCSVINAMGESGAWEAAVELIQSMRRRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEPPPPGRAAYGCACRACARKGEWGAVLGLIEDMREDGLERDSSVYASAMRAFVEAGDWERAVEIVTVEMERDGVSPDALSFGQALRACRAGADGSGRAAQLALALVGEVRSRGLEPGVVILESAARACLADDRPELALDIVSETLDSWRRGSLGGDGDGGGGRRWGIDEVQRLETMRITVLGRLGRWEDSLEALDAMRAKFGDDDLDERAFVSAARACAAAGEWSLIQVLQSEASAVGDGDGVSPGSAWDMQRALLSGLTTAGMWRRAMGMLREMHHGGGGDTVMPAAGEERGQGMPDPSPHWQRRMFKDHRSVMHACLRAGAWDKALSVWSDLRSIVEGPIPCGRTYTAALRACGPLGLWATARDLLSEMRDGAEGAEGDGLLLLPEARHYAFAVSAATVADDISSYEEATLSGRGGWGAGGSDAVVDGDGGSGNAALRSVLSDMAAGGGGGVEIGWETYAAVCWARSQRKQWHRASLGVLELMGEHGFGDGALGTEEAAEGMRSLYRRLLAAASKIPRFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAAAATAFARAGDWEGARDIAVRFDPRVGGPTAGGASSGTGEPSAVRRRTADAAAVVSVAVAATARAGELVEAEALAELARVIATTAEVSASSSGXXXXXXXSRSRGSDGEEARVSRGTERSNNPLGFDHRAGVALADAYERAGRLSDAEGLRSRLQGRMASSLGLEEAAGVEGGVAAAPAASAVPRLPSVGGHSRRRRPLAEGDESTWPXXXXXXXXXXXYDLFLQWMATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGPPRESDEEGLTIRELEGW
Sbjct:    1 MAVVAGTTLLILRPIKHTAALRPDARPANPPADPFRSQYCNSGRRRGGVALASSPATVRMTATAGGGATTHIGSIKDCASGRRGAGLTTSATATLASRVSLGMQGGGLQKRAWRAAGRRPVAPLCMSQTSPPVFQPQQAGDRKDSXXXXXXXXXXXXXXXXXXXXSNGQGAADVRQQPAVVSLHQ------------------------------XXXXXXXXXXXXXPRVADDIAAMKALGKEGKWREAVAVLSQLKEDASAASNGDGSDLAPNLAVYNXXXXXXXXXXXXXXXXXXXEEMRSAGVQPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGCSCGPXXXXXXXXXXGEVERALRLLEEMAADPRPEAQPEALSYTLVLKACGREGRWETALQLLTEMQAKGLEPTVLSFRYALTACASSSSSRGVSGGSGEEDFAGVWERCRSLMDAMGRLGLEPDRLCYKQAVDAAAKAGDVGAALDLMDGMENCEGFRGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRPNTVVYNTLLALCRGKPLRGVRGGXXXXXXXXXXXXXXXXXDGTGPNLNGYGGXGGLEEVNGHGVAVGMPDGRAIRNGVSVPGGGTVGSRERPDELVGTAVALLHEMTVGGSECAPDKMSFELVMQACVNAGRPESALKVFRAMARVAAGXXXXXXXXXXXXXXXXXXGRGRAVEVRPDRATFRLGLTAAAEAGDGPAAAVLLEEMRDAGIAMDESAFHLAATAFGRAGLWRQGVRVAVVAAEQGIALAPTTLTSILGACAKQARWREALGLLQGTRPVLQQGLSSLPLSTGAGVVAGNERRGEGNVVAAYTLAMVACRRSGRHSEGLRVLEMLEEDGGVGDEAFFRVALKCCAKAGGVGERGDCSGAAVADRVLEGMSAQGIRCGVEGFTDIAQAYGLAGRWEDALALLPRAAALAAVPDERMYCSVINAMGESGAWEAAVELIQSMRRRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEPPPPGRAAYGCACRACARKGEWGAVLGLIEDMREDGLERDSSVYASAMRAFVEAGDWERAVEIVTVEMERDGVSPDALSFGQALRACRAGADGSGRAAQLALALVGEVRSRGLEPGVVILESAARACLADDRPELALDIVSETLDSWRRGSLGGDGDGGGGRRWGIDEVQRLETMRITVLGRLGRWEDSLEALDAMRAKFGDDDLDERAFVSAARACAAAGEWSLIQVLQSEASAVGDGDGVSPGSAWDMQRALLSGLTTAGMWRRAMGMLREMHHGGGGDTVMPAAGEERGQGMPDPSPHWQRRMFKDHRSVMHACLRAGAWDKALSVWSDLRSIVEGPIPCGRTYTAALRACGPLGLWATARDLLSEMRDGAEGAEGDGLLLLPEARHYAFAVSAATVADDISSYEEATLSGRGGWGAGGSDAVVDGDGGSGNAALRSVLSDMAAGGGGGVEIGWETYAAVCWARSQRKQWHRASLGVLELMGEHGFGDGALGTEEAAEGMRSLYRRLLAAASKIPRFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAAAATAFARAGDWEGARDIAVRFDPRVGGPTAGGASSGTGEPSAVRRRTADAAAVVSVAVAATARAGELVEAEALAELARVIATTAEVSASSSGXXXXXXXSRSRGSDGEEARVSRGTERSNNPLGFDHRAGVALADAYERAGRLSDAEGLRSRLQGRMASSLGLEEAAGVEGGVAAAPAASAVPRLPSVGGHSRRRRPLAEGDESTWPXXXXXXXXXXXYDLFLQWMATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGPPRESDEEGLTIRELEGW 1882          
BLAST of Ec-00_001950.1 vs. uniprot
Match: D8LLG9_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG9_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.200e-6
Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 0
Query:  431 SYTLVLKACGREGRWETALQLLTEMQAKGLEPTVLSFRYALTACASSSSSRGVSGGSGE-EDFAGVWERCRSLMDAMGRLGLEPDRLCYKQAVDAAAKAGDVGAALDLMDGMENCEGFRG 549
            S+  VL AC + GRW +AL +L EM   G+ P  ++F   L A    + S G S G G  +  A  W     L+  M R G+EPD + Y   ++     G    AL+++DGM N +G  G
Sbjct:  495 SFMAVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAKREAPRWPMALELLADMERRGVEPDVVTYNSLINVLRWGGQRDRALEILDGM-NAKGGAG 613          
BLAST of Ec-00_001950.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.800e-5
Identity = 116/509 (22.79%), Postives = 169/509 (33.20%), Query Frame = 0
Query: 1039 PDERMYCSVINAMGESGAWEAAVELIQSMRRRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEPPPPGRAAYGCACRACARKGEWGAVLGLIEDMREDGLERDSSVYASAMRAFVEAGDWERAVEIVTVEMERDGVSPDALS--------------------------------FGQALRACRAGADGSGRAAQLALALVGEVRSRGLEPGVVILESAARACLADDRPELALDIVSETLDS-WRRGSLGGDGDGGGGRRW-GIDEVQRLETMRITVLGRLGRWEDSLEALDAM-RAKFGDDDLDERAFVSAARACAAAGEWS-LIQVLQSEASAV--------GDGDGVSPGSAWDM--QRALLSGLTTAGMWRRAMGMLREMHHGGGGDTVM---PAAGEE------------RGQGMPDPSPHWQRRMFKDHRSVMHACLRAGAWDKALSVWSDLRSIVEGP-IPCGRTYTAALRACGPLGLWATARDLLSEMRDGAEGAEGDG 1485
            PD   Y + I A G  G W  A+ L++ MR +                               +    P G AA             W  VLGL+E+MR +G+  D   + +A+ A  +AG WERA++++  EM   G + D L                                       A RAG                                +A A   D R     D   +T +   R  + G  G  GGG  W   D V     M    +   GRW++    L  M       D       ++  RA    G+W   ++VL     A         G G+  + G + D+    A++S L  AG W++A+ +LR +   G         PAA EE            RG G    S          + + + AC RA     AL    DL   +EG  +    ++  A+ AC   G W  A  +L+ M  G     G+G
Sbjct:   86 PDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKLGETRINGNNGVAEPRGHAAEEEKXXXXXXXEGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE-EMGGGGDNDDGLRRRRTGVLIXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMAARAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSATAAAPDLRGSSGRDSSRDTREGVGRTSAAGAPGGTGGGAAWPAADAVSFNSAMEACAIA--GRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRA---GGQWQRAVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAAREEPAAAWDALAAEARGGGAAISSSPAAGPNLVCYNAALTACARAKEGSTAL----DLLEEMEGRGVFDTESFNCAMLACRGKGQWHKATAILNRMVSGDAVRLGEG 584          
BLAST of Ec-00_001950.1 vs. uniprot
Match: A0A7S1GCW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCW6_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.840e-5
Identity = 37/113 (32.74%), Postives = 52/113 (46.02%), Query Frame = 0
Query:  426 QPEALSYTLVLKACGREGRWETALQLLTEMQAKGLEPTVLSFRYALTACASSSSSRGVSGGSGEEDFAGVWERCRSLMDAMGRLGLEPDRLCYKQAVDAAAKAGDVGAALDLM 538
            +P+A++YT ++ ACGR    E A  +LTEM+   ++PT  ++  A+ A A S                G  ER   L D M   G   D   Y  A+ A +  GDV  A D M
Sbjct:   12 EPDAVTYTAMISACGRADEIERADNMLTEMKHSDVQPTHATYNAAIWAMARSFR-------------PGAAERAHELFDEMAAYGKAADARTYNAALLACSHTGDVDRAKDYM 111          
The following BLAST results are available for this feature:
BLAST of Ec-00_001950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEE2_ECTSI0.000e+097.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LLG9_ECTSI2.200e-635.00PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
D8LMP8_ECTSI1.800e-522.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1GCW6_9STRA3.840e-532.74Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 708..769
e-value: 3.1E-5
score: 25.3
coord: 259..392
e-value: 2.1E-33
score: 117.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 399..637
e-value: 1.6E-36
score: 128.2
coord: 929..1081
e-value: 2.4E-18
score: 68.5
coord: 787..905
e-value: 1.8E-13
score: 52.5
coord: 1278..1593
e-value: 9.8E-13
score: 50.1
coord: 1103..1268
e-value: 3.5E-20
score: 74.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 430..475
e-value: 1.8E-7
score: 31.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 312..345
e-value: 2.9E-7
score: 28.2
coord: 431..464
e-value: 1.1E-7
score: 29.5
coord: 1147..1181
e-value: 1.3E-4
score: 19.9
coord: 347..380
e-value: 5.0E-4
score: 18.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 332..390
e-value: 5.0E-11
score: 42.5
coord: 1132..1191
e-value: 3.5E-4
score: 20.6
coord: 592..632
e-value: 5.1E-4
score: 20.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 1043..1070
e-value: 0.038
score: 14.2
coord: 272..293
e-value: 1.3
score: 9.4
coord: 553..580
e-value: 0.15
score: 12.4
coord: 1450..1476
e-value: 0.49
score: 10.8
coord: 742..763
e-value: 0.24
score: 11.7
coord: 1357..1379
e-value: 0.94
score: 9.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1144..1179
score: 11.005
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..298
score: 5.722
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 833..867
score: 5.974
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1040..1074
score: 9.12
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1792..1822
score: 5.459
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 514..544
score: 6.248
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 926..960
score: 6.818
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1410..1444
score: 6.314
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1180..1219
score: 5.437
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 798..832
score: 7.048
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1005..1039
score: 6.193
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1351..1385
score: 5.557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 309..343
score: 12.88
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 12.189
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1447..1477
score: 6.675
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 344..378
score: 11.466
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 549..583
score: 8.988
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1109..1143
score: 7.936
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 868..905
score: 5.941
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 736..766
score: 8.342
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 584..618
score: 8.912
IPR005158Bacterial transcriptional activator domainPFAMPF03704BTADcoord: 1225..1326
e-value: 7.9E-5
score: 23.1
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 1111..1246
coord: 272..419
coord: 494..631
coord: 408..476
coord: 719..1071

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2174790..2187304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001950.1Ec-00_001950.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 2174790..2187400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001950.1 ID=Ec-00_001950.1|Name=Ec-00_001950.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1947bp
MPPCHKPRRDRLDGRLPEHEHGGSMRRGRPVSRGMAVVAGTTLLILRPIK
HTAALRPDARPANPPADPFRSQYCNSGRRRGGVALASSPATVRMTATAGG
GATTHIGSIKDCASGRRGAGLTTSATATLASRVSLGMQGGGLQKRAWRAA
GRRPVAPLCMSQTSPPVFQPQQAGDRKDSSSSSPTAAGDSVVGKEDDHHS
NGQGAADVRQQPAVVSLHQHHRHNHHPVPVVDVHGSASPLNGHHTAAGAV
ASSPVAAEPAPPPRVADDIAAMKALGKEGKWREAVAVLSQLKEDASAASN
GDGSDLAPNLAVYNAAISAVSRSGKWDEALGLLEEMRSAGVQPDVRTFTS
VVSAGSRSGRVDLAERVLDTMRAEGVPPNAATYNAVITGCSCGPPPPPRG
GSGGGEVERALRLLEEMAADPRPEAQPEALSYTLVLKACGREGRWETALQ
LLTEMQAKGLEPTVLSFRYALTACASSSSSRGVSGGSGEEDFAGVWERCR
SLMDAMGRLGLEPDRLCYKQAVDAAAKAGDVGAALDLMDGMENCEGFRGA
VEYNQIIMACGRRGDWQRAVSTLGRIRRAGGAPDAHSFAMAMTACARAGE
SRQALRLLDELKREGGGVRPNTVVYNTLLALCRGKPLRGVRGGGGGGGGG
GVPAAAAAAADGTGPNLNGYGGGGGLEEVNGHGVAVGMPDGRAIRNGVSV
PGGGTVGSRERPDELVGTAVALLHEMTVGGSECAPDKMSFELVMQACVNA
GRPESALKVFRAMARVAAGGGGAVGGGGGGSGERRGGGRGRAVEVRPDRA
TFRLGLTAAAEAGDGPAAAVLLEEMRDAGIAMDESAFHLAATAFGRAGLW
RQGVRVAVVAAEQGIALAPTTLTSILGACAKQARWREALGLLQGTRPVLQ
QGLSSLPLSTGAGVVAGNERRGEGNVVAAYTLAMVACRRSGRHSEGLRVL
EMLEEDGGVGDEAFFRVALKCCAKAGGVGERGDCSGAAVADRVLEGMSAQ
GIRCGVEGFTDIAQAYGLAGRWEDALALLPRAAALAAVPDERMYCSVINA
MGESGAWEAAVELIQSMRRRRPSAAATAGGSGVGTSDSGASGVAAAAVVS
PSLEPPPPGRAAYGCACRACARKGEWGAVLGLIEDMREDGLERDSSVYAS
AMRAFVEAGDWERAVEIVTVEMERDGVSPDALSFGQALRACRAGADGSGR
AAQLALALVGEVRSRGLEPGVVILESAARACLADDRPELALDIVSETLDS
WRRGSLGGDGDGGGGRRWGIDEVQRLETMRITVLGRLGRWEDSLEALDAM
RAKFGDDDLDERAFVSAARACAAAGEWSLIQVLQSEASAVGDGDGVSPGS
AWDMQRALLSGLTTAGMWRRAMGMLREMHHGGGGDTVMPAAGEERGQGMP
DPSPHWQRRMFKDHRSVMHACLRAGAWDKALSVWSDLRSIVEGPIPCGRT
YTAALRACGPLGLWATARDLLSEMRDGAEGAEGDGLLLLPEARHYAFAVS
AATVADDISSYEEATLSGRGGWGAGGSDAVVDGDGGSGNAALRSVLSDMA
AGGGGGVEIGWETYAAVCWARSQRKQWHRASLGVLELMGEHGFGDGALGT
EEAAEGMRSLYRRLLAAASKIPRFATGAGGTQSAAPARSATRQVLLDAEE
RLASVPGGAGPQVLAAAATAFARAGDWEGARDIAVRFDPRVGGPTAGGAS
SGTGEPSAVRRRTADAAAVVSVAVAATARAGELVEAEALAELARVIATTA
EVSASSSGGGATGGGSRSRGSDGEEARVSRGTERSNNPLGFDHRAGVALA
DAYERAGRLSDAEGLRSRLQGRMASSLGLEEAAGVEGGVAAAPAASAVPR
LPSVGGHSRRRRPLAEGDESTWPPDEEAGGDDEQYDLFLQWMATGEEEEE
EEEEEEGDTWLGDDDFDDDDDDHVLVAGPPRESDEEGLTIRELEGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR005158BTAD