Ec-00_001770.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_001770.1
Unique Name	Ec-00_001770.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	152

Homology

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BLAST of Ec-00_001770.1 vs. uniprot
Match: D8LEC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC9_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 3.490e-96
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MVRSANVGSKIAGMFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATANEKTMLIEAQRDLQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYDVRATL 151
            MVRSANVGSKIAGMFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATANEKTMLIEAQRDLQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYDVRATL
Sbjct:    1 MVRSANVGSKIAGMFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATANEKTMLIEAQRDLQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYDVRATL 151

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BLAST of Ec-00_001770.1 vs. uniprot
Match: D8LEC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC0_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 8.750e-53
Identity = 119/231 (51.52%), Postives = 124/231 (53.68%), Query Frame = 0

Query:   14 MFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATANEKTMLIEAQRD--------------------------------------------------------------------------------------------------LQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYD 146
            MFSRAKVLLPGYRRAAKELAERQQL LEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGK QADRESALVHTVEESRAETATANEKT   EAQRD                                                                                                  LQRLGM  LN A++KEE KT+KAERD+ATCRAKY+
Sbjct:    1 MFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQLQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYE 231

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BLAST of Ec-00_001770.1 vs. uniprot
Match: A0A6H5KTB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB2_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.330e-7
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0

Query:  113 QRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYDVRATL 151
            QRL ML LN A++KEE KT+KAERDLATCRAKY+ RATL
Sbjct:  124 QRLRMLCLNAALVKEEGKTEKAERDLATCRAKYE-RATL 161

The following BLAST results are available for this feature:

BLAST of Ec-00_001770.1 vs. uniprot

BLAST of Ec-00_001770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LEC9_ECTSI	3.490e-96	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LEC0_ECTSI	8.750e-53	51.52	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5KTB2_9PHAE	4.330e-7	76.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 72..151
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..48
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 49..71
None	No IPR available	TMHMM	TMhelix		coord: 49..71

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1983220..1985725 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001770.1	Ec-00_001770.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 1983220..1985725 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_001770.1 ID=Ec-00_001770.1|Name=Ec-00_001770.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=152bp
MVRSANVGSKIAGMFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMA
VGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATAN
EKTMLIEAQRDLQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYDVRAT
L*