Ec-00_001740.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001740.1
Unique NameEc-00_001740.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length164
Homology
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BLAST of Ec-00_001740.1 vs. uniprot
Match: D8LEC6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC6_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 1.690e-111
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 
Query:    1 MNTLWAVIAVTCFLSTARTSSCFTHGARLRPPRPPGSCSSPPPATAPFESRAGATAPAAAAGVGGAEEGDILLTFKPSEVEVTCKPGEVALDVASRCSGMPEDSKAPFCRDGGCYNCEVEVVEAAELGIVDNLVRACQFKIPAEAKQLTLIQMTSEEAFEDML 163
            MNTLWAVIAVTCFLSTARTSSCFTHGARLRPPRPPGSCSSPPPATAPFESRAGATAPAAAAGVGGAEEGDILLTFKPSEVEVTCKPGEVALDVASRCSGMPEDSKAPFCRDGGCYNCEVEVVEAAELGIVDNLVRACQFKIPAEAKQLTLIQMTSEEAFEDML
Sbjct:    1 MNTLWAVIAVTCFLSTARTSSCFTHGARLRPPRPPGSCSSPPPATAPFESRAGATAPAAAAGVGGAEEGDILLTFKPSEVEVTCKPGEVALDVASRCSGMPEDSKAPFCRDGGCYNCEVEVVEAAELGIVDNLVRACQFKIPAEAKQLTLIQMTSEEAFEDML 163
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BLAST of Ec-00_001740.1 vs. uniprot
Match: A0A7S3EKU6_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKU6_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 1.290e-9
Identity = 34/81 (41.98%), Postives = 45/81 (55.56%), Query Frame = 0 
Query:   75 FKPSEVEVTCKPGEVALDVASRCSGMPEDSKAPFCRDGGCYNCEVEVVEAAELGIVDNLVRACQFKIPAEAKQLTLIQMTS 155
            F+PS  EVT  PGE   DVA R   + E  +  +CRDGGCY CE+EV          +L+R CQ+KIP     L +++  S
Sbjct:   50 FEPSGSEVTASPGESLFDVAERVGELAEKPER-YCRDGGCYRCEMEVN--------GDLLRICQYKIPETRTYLDVLRCVS 121
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BLAST of Ec-00_001740.1 vs. uniprot
Match: M2VVV3_GALSU (2Fe-2S iron-sulfur cluster binding domain protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVV3_GALSU)

HSP 1 Score: 62.8 bits (151), Expect = 1.620e-9
Identity = 31/94 (32.98%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:   71 ILLTFKPSEVEVTCKPGEVALDVASRCSGMPEDSKAPFCRDGGCYNCEVEVVEAAELGIVDNLVRACQFKIPAEAKQLTLIQMTSEEAF-EDML 163
            +++ F P  V V  + G+  LDVA +   + E    PFCRDGGCY CE+E   + +L     L+R C++ +P  ++++ L ++ +++ + E+ML
Sbjct:   49 VVIRFLPDNVVVQAEVGKRLLDVALQAGQLKEHPLEPFCRDGGCYKCEMET--SNKLFEEYPLIRTCKYTVPVVSEEIQLTKVDNDQLWGENML 140
The following BLAST results are available for this feature:
BLAST of Ec-00_001740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEC6_ECTSI1.690e-111100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3EKU6_9RHOD1.290e-941.98Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2VVV3_GALSU1.620e-932.982Fe-2S iron-sulfur cluster binding domain protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.674
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 69..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1962204..1964014 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001740.1Ec-00_001740.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1961020..1964072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001740.1 ID=Ec-00_001740.1|Name=Ec-00_001740.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=164bp
MNTLWAVIAVTCFLSTARTSSCFTHGARLRPPRPPGSCSSPPPATAPFES
RAGATAPAAAAGVGGAEEGDILLTFKPSEVEVTCKPGEVALDVASRCSGM
PEDSKAPFCRDGGCYNCEVEVVEAAELGIVDNLVRACQFKIPAEAKQLTL
IQMTSEEAFEDML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf