Ec-00_001670.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_001670.1
Unique Name	Ec-00_001670.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	422

Homology

[Close]

BLAST of Ec-00_001670.1 vs. uniprot
Match: D8LEC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC0_ECTSI)

HSP 1 Score: 528 bits (1360), Expect = 1.520e-184
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0

Query:   10 MFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQLQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYEECRSSLQSAREQMARDSAQAEAVKEAARKAATQGKETGPQAQKQQVAQGSHASTASDAKLDEEGFGLQHMEQAMLRSLEEEVKQDGVCDPQQGKVSSAPRAKAIAAPARXXXXXXXXXLPTASTNRWAVFAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRANNEH 421
            MFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQLQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYEECRSSLQSAREQMARDSAQAEAVKEAARKAATQGKETGPQAQKQQVAQGSHASTASDAKLDEEGFGLQHMEQAMLRSLEEEVKQDGVCDPQQGKVSSAPRAKAIAAPARXXXXXXXXXLPTASTNRWAVFAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRANNEH
Sbjct:    1 MFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQLQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYEECRSSLQSAREQMARDSAQAEAVKEAARKAATQGKETGPQAQKQQVAQGSHASTASDAKLDEEGFGLQHMEQAMLRSLEEEVKQDGVCDPQQGKVSSAPRAKAIAAPARXXXXXXXXXLPTASTNRWAVFAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRANNEH 412

[Close]

BLAST of Ec-00_001670.1 vs. uniprot
Match: D8LEC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC9_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 2.430e-54
Identity = 125/239 (52.30%), Postives = 132/239 (55.23%), Query Frame = 0

Query:    2 SVGSKMAGMFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQLQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYE 240
            +VGSK+AGMFSRAKVLLPGYRRAAKELAERQQL LEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGK QADRESALVHTVEESRAETATANEKT   EAQRD                                                                                                  LQRLGM  LN A++KEE KT+KAERD+ATCRAKY+
Sbjct:    6 NVGSKIAGMFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATANEKTMLIEAQRD--------------------------------------------------------------------------------------------------LQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYD 146

[Close]

BLAST of Ec-00_001670.1 vs. uniprot
Match: A0A6H5K864_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K864_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 7.400e-24
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 0

Query:  262 AVKEAARKAATQGKETGPQAQKQQVAQGSHASTASDAKLDEEGFGLQHMEQAMLRSLEEEVKQDGVCDPQQGKVS 336
            AV+EAARK ATQGKETGPQAQ+QQ+ QGSHASTASDAKL +EGFGL+HME+AMLRS+EE  KQDG  +PQQGKVS
Sbjct:   36 AVEEAARKGATQGKETGPQAQQQQLPQGSHASTASDAKLGKEGFGLRHMEEAMLRSMEES-KQDGGRNPQQGKVS 109

[Close]

BLAST of Ec-00_001670.1 vs. uniprot
Match: A0A6H5KTB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB2_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 6.790e-22
Identity = 112/136 (82.35%), Postives = 118/136 (86.76%), Query Frame = 0

Query:  108 TARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQL---QRLGMRSLNAALMKEEGKTEKAERDMATCRAKYE 240
            TARSACYEFQLAVVENRADSH+A A+ ARVKT L T+TKL +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQ    QRL M  LNAAL+KEEGKTEKAERD+ATCRAKYE
Sbjct:   22 TARSACYEFQLAVVENRADSHKAGADLARVKTDLPTKTKLFRRTEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQASAPQRLRMLCLNAALVKEEGKTEKAERDLATCRAKYE 157

The following BLAST results are available for this feature:

BLAST of Ec-00_001670.1 vs. uniprot

BLAST of Ec-00_001670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LEC0_ECTSI	1.520e-184	100.00	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D8LEC9_ECTSI	2.430e-54	52.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K864_9PHAE	7.400e-24	80.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KTB2_9PHAE	6.790e-22	82.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 211..231
None	No IPR available	COILS	Coil	Coil	coord: 246..266
None	No IPR available	COILS	Coil	Coil	coord: 176..203
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..44
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..67
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 68..421
None	No IPR available	TMHMM	TMhelix		coord: 48..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1892229..1899411 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001670.1	Ec-00_001670.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 1892229..1899411 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_001670.1 ID=Ec-00_001670.1|Name=Ec-00_001670.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=422bp
MSVGSKMAGMFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGV
AFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTT
RFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKR
TEAEKQTALSACYEYQLEGIHNRQDANRASMALAQAEHDLQKMTEVVARF
NVQTQLQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYEECRSSLQSAR
EQMARDSAQAEAVKEAARKAATQGKETGPQAQKQQVAQGSHASTASDAKL
DEEGFGLQHMEQAMLRSLEEEVKQDGVCDPQQGKVSSAPRAKAIAAPARR
RREKKKEPLPTASTNRWAVFAEDEDDDDEDEGKGAEGATPADATPATSPP
GRGRTRGKSPSPSRRRANNEH*