Ec-00_000880.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_000880.1
Unique NameEc-00_000880.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length236
Homology
BLAST of Ec-00_000880.1 vs. uniprot
Match: A0A6H5KIY4_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY4_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.330e-41
Identity = 132/186 (70.97%), Postives = 136/186 (73.12%), Query Frame = 0
Query:   50 PRDDSIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGVKPPERXXXXXXXXXXXXXXXXXXXXXXXXEKXXMEXXXXXXXXXXXXXXXGGKEATGGXXXXXXXXXXXXXXEKVPETGGRELTAGATSTPPAPGSAXXXXXXXXAPDSEKNGASAEGGS 235
            PRDDSIKP+VVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEAR+RVGGRCYTKRWISSGVKPPER XXXXX                  EK X  XXXXXXXXXXXXXXX        XXXXXXXXX     EKVPE G +EL A ATSTPPAP SA        APDS K GA+AEGGS
Sbjct:  513 PRDDSIKPIVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARRRVGGRCYTKRWISSGVKPPERPXXXXXSTKGPRVARREAAAAA--EKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGAAEKVPEKGEQELAASATSTPPAPDSADAAIAA--APDSGKRGAAAEGGS 694          
BLAST of Ec-00_000880.1 vs. uniprot
Match: D8LQQ1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ1_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.810e-32
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0
Query:   77 AGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGVKPPERXXXXXXXXXXXXXXXXXXXXXXXXEKXXMEXXXXXXXXXXXXXXXGGKEATGGXXXXXXXXXXXXXXEKVPETGGRELTAGATSTPPAPGSA 212
            +GLG ALELQKLGIEVIV EARQRVGGRCYTKRWISSGVKPPERXXXXXXXXXXXXXXXXXXXXXXXXEKXXMEXXXXXXXXXXXXXXXGGKEATGGXXXXXXXXXXXXXXEKVPETGGRELTAGATSTPPAPGSA
Sbjct:  454 SGLGGALELQKLGIEVIVGEARQRVGGRCYTKRWISSGVKPPERXXXXXXXXXXXXXXXXXXXXXXXXEKXXMEXXXXXXXXXXXXXXXGGKEATGGXXXXXXXXXXXXXXEKVPETGGRELTAGATSTPPAPGSA 589          
BLAST of Ec-00_000880.1 vs. uniprot
Match: D8LDW3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW3_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 6.570e-13
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
Query:  188 EKVPETGGRELTAGATSTPPAPGSAXXXXXXXXAPDSEKNGASAEGGS 235
            EKVPETGGRELTAGATSTPPAPGS XXXXXXXXAPDSEKNGASAEGGS
Sbjct:   40 EKVPETGGRELTAGATSTPPAPGSXXXXXXXXXAPDSEKNGASAEGGS 87          
BLAST of Ec-00_000880.1 vs. uniprot
Match: UPI0003602C02 (flavin monoamine oxidase family protein n=1 Tax=Longispora albida TaxID=203523 RepID=UPI0003602C02)

HSP 1 Score: 68.6 bits (166), Expect = 9.740e-10
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   50 PRDDSIKPVVVSSLGR----PHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGV 115
            P  DSI  VV + LGR    P RV+V+GAG AGL AA ELQ+ G E +V+EA+ RVGGR YT R  + G+
Sbjct:   29 PVPDSILDVVTAGLGRREQHPKRVIVIGAGMAGLVAAFELQRQGHEPVVLEAQNRVGGRVYTMRDFAPGL 98          
BLAST of Ec-00_000880.1 vs. uniprot
Match: A0A7X4BVU0_9BACT (FAD-dependent oxidoreductase n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4BVU0_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 2.300e-8
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   50 PRDDSIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKR 109
            P +    P  +++ GRP R+VVVGAG AGL AA EL + G EV V+EAR+RVGGR  T R
Sbjct:   32 PVEPEDSPGALAATGRPMRIVVVGAGMAGLAAAYELSRAGHEVTVLEARERVGGRVLTLR 91          
BLAST of Ec-00_000880.1 vs. uniprot
Match: A0A7S2SPD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPD9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.150e-8
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0
Query:   65 RPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTK 108
            R  RVVV+GAG AGL AA EL+KLG EVIV+EAR R+GGRC+++
Sbjct:  131 RLFRVVVIGAGMAGLAAARELEKLGFEVIVLEARHRIGGRCHSE 174          
BLAST of Ec-00_000880.1 vs. uniprot
Match: UPI0016899B31 (FAD-dependent oxidoreductase n=2 Tax=Phormidium sp. FACHB-1136 TaxID=2692848 RepID=UPI0016899B31)

HSP 1 Score: 63.5 bits (153), Expect = 4.580e-8
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0
Query:   62 SLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYT 107
            ++  P RV+VVGAG AGL AA ELQ+LG EV+VVEAR R+GGR +T
Sbjct:   31 TVSNPKRVIVVGAGLAGLAAAQELQRLGHEVVVVEARDRIGGRVWT 76          
BLAST of Ec-00_000880.1 vs. uniprot
Match: A0A838MFQ8_9HYPH (FAD-dependent oxidoreductase n=3 Tax=Rhizobiaceae TaxID=82115 RepID=A0A838MFQ8_9HYPH)

HSP 1 Score: 63.2 bits (152), Expect = 6.460e-8
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   54 SIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGVK 116
            ++KP   ++ G+P +V+VVGAG AGL AA  L + GIEVIVVEAR R+GGR  T R +   V+
Sbjct:   71 ALKPAFAAAAGKP-KVIVVGAGIAGLSAARTLMRHGIEVIVVEARDRIGGRISTDRSLGVAVE 132          
BLAST of Ec-00_000880.1 vs. uniprot
Match: A0A6G1SFH7_9ACAR (Lysine-specific histone demethylase 1A n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SFH7_9ACAR)

HSP 1 Score: 63.2 bits (152), Expect = 7.680e-8
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0
Query:   56 KPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKR 109
            KP + S   R  RV+V+GAG +GL AA +LQK G+EVIV+EAR RVGGR +T R
Sbjct:  259 KPPLKSGGKRAGRVIVIGAGLSGLAAARQLQKFGMEVIVLEARNRVGGRVHTYR 312          
BLAST of Ec-00_000880.1 vs. uniprot
Match: A0A2S9F344_9MYCO (Monooxygenase (Fragment) n=1 Tax=Mycobacterium sp. ITM-2017-0098 TaxID=2099692 RepID=A0A2S9F344_9MYCO)

HSP 1 Score: 57.4 bits (137), Expect = 8.440e-8
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   69 VVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYT 107
            VVVVGAGFAGL AA EL +LG +V+V+E R RVGGR YT
Sbjct:    4 VVVVGAGFAGLSAARELSRLGRDVVVLEGRDRVGGRSYT 42          
The following BLAST results are available for this feature:
BLAST of Ec-00_000880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIY4_9PHAE2.330e-4170.97PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LQQ1_ECTSI2.810e-3297.79PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LDW3_ECTSI6.570e-1397.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI0003602C029.740e-1054.29flavin monoamine oxidase family protein n=1 Tax=Lo... [more]
A0A7X4BVU0_9BACT2.300e-855.00FAD-dependent oxidoreductase n=3 Tax=Gemmatimonade... [more]
A0A7S2SPD9_9STRA4.150e-868.18Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI0016899B314.580e-865.22FAD-dependent oxidoreductase n=2 Tax=Phormidium sp... [more]
A0A838MFQ8_9HYPH6.460e-852.38FAD-dependent oxidoreductase n=3 Tax=Rhizobiaceae ... [more]
A0A6G1SFH7_9ACAR7.680e-859.26Lysine-specific histone demethylase 1A n=1 Tax=Ace... [more]
A0A2S9F344_9MYCO8.440e-871.79Monooxygenase (Fragment) n=1 Tax=Mycobacterium sp.... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availablePFAMPF13450NAD_binding_8coord: 71..109
e-value: 8.8E-10
score: 38.7
NoneNo IPR availablePANTHERPTHR10742:SF350LYSINE-SPECIFIC HISTONE DEMETHYLASE 1Acoord: 8..123
NoneNo IPR availablePANTHERPTHR10742AMINE OXIDASEcoord: 8..123
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 63..128
e-value: 3.3E-17
score: 65.6
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 66..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1134460..1135682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000880.1Ec-00_000880.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1134319..1135682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_000880.1 ID=Ec-00_000880.1|Name=Ec-00_000880.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=236bp
MQRQQQQLQQSSRKNKRRQEDTSAVEAAKKKRKVQGGGGDPTATARKKKP
RDDSIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQR
VGGRCYTKRWISSGVKPPERPPPPPPSTKGPRVARREAAAAAAAEKAAME
KAAAAEKAAAGGTAAGGKEATGGKAAAEKESAAEKVAEKVPETGGRELTA
GATSTPPAPGSAAAAAAATTAPDSEKNGASAEGGSX
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf