Ec-00_000830.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_000830.1
Unique NameEc-00_000830.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length27
Homology
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BLAST of Ec-00_000830.1 vs. uniprot
Match: D7FXX5_ECTSI (RING Zn finger-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX5_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.990e-11
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0 
Query:    1 MCTRCGACMTFCPICMQDITDLVELQ 26
            MCTRCGACMTFCPICMQDITDLVELQ
Sbjct:  136 MCTRCGACMTFCPICMQDITDLVELQ 161
The following BLAST results are available for this feature:
BLAST of Ec-00_000830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXX5_ECTSI1.990e-11100.00RING Zn finger-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 2..13
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 1..22
score: 7.424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1076352..1076837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000830.1Ec-00_000830.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1076108..1076877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_000830.1 ID=Ec-00_000830.1|Name=Ec-00_000830.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=27bp
MCTRCGACMTFCPICMQDITDLVELQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0179004Fe4S_Fe_S_CS
IPR0178964Fe4S_Fe-S-bd