Ec-00_000560.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_000560.1
Unique NameEc-00_000560.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length155
Homology
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BLAST of Ec-00_000560.1 vs. uniprot
Match: D7FHV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV4_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 7.150e-86
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 
Query:    1 MPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXXYEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQVAGMPTSCLSYDGVVDRIRASPCPISLRFRRALFKSWWGREYTLDLSYWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRLG 154
            MPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXXYEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQVAGMPTSCLSYDGVVDRIRASPCPISLRFRRALFKSWWGREYTLDLSYWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRLG
Sbjct:    1 MPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXXYEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQVAGMPTSCLSYDGVVDRIRASPCPISLRFRRALFKSWWGREYTLDLSYWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRLG 154
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BLAST of Ec-00_000560.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 5.830e-63
Identity = 132/183 (72.13%), Postives = 134/183 (73.22%), Query Frame = 0 
Query:    1 MPPQHANDSADAXXXXXXXXXXXXXXXXXXXXXXXXXXYEGEEGGEQIQDGRFYEVVFETAQLGIVLLRQ------------------------------VAGMPTSCLSYDGVVDRIRASPCPISLRFRRALFKSWWGREYTLDLSYWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRL 153
            MPPQHANDSADAXXXXXXXXXXX                + EEGGEQIQDGRFYEVVFETAQLGIVLLRQ                              VAGMPTSCLSYDGVVDRIRASP PISLRFRRALF+SWWGREYTLDLS WDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRL
Sbjct: 3344 MPPQHANDSADAXXXXXXXXXXXLMGASALDLE------DEEEGGEQIQDGRFYEVVFETAQLGIVLLRQNGVAVVEEVSSYNGVGGRAAGPFPGDELTEVAGMPTSCLSYDGVVDRIRASPRPISLRFRRALFRSWWGREYTLDLSSWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRKRRL 3520
The following BLAST results are available for this feature:
BLAST of Ec-00_000560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHV4_ECTSI7.150e-86100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYL2_9PHAE5.830e-6372.13FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:756916..759389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000560.1Ec-00_000560.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 756916..759389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_000560.1 ID=Ec-00_000560.1|Name=Ec-00_000560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=155bp
MPPQHANDSADAAAAAAGAAAAALMGASALDLEDEEQEYEGEEGGEQIQD
GRFYEVVFETAQLGIVLLRQVAGMPTSCLSYDGVVDRIRASPCPISLRFR
RALFKSWWGREYTLDLSYWDGHRLDGILLVGGGAGDQAVVGSVDGFRPRK
RRLG*
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