Ec-00_000350.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_000350.1
Unique NameEc-00_000350.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length244
Homology
BLAST of Ec-00_000350.1 vs. uniprot
Match: D7FHJ9_ECTSI (HRDC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ9_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 1.710e-125
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
Query:    1 MWKSLSRAHVATAVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWSEINVRVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVRVALGLTGEDDRGRGALVVPVEEEPEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGWRIGGRWGSRRDGVVYSKTVVALAAATAATAGVIVAVWKRRKA 243
            MWKSLSRAHVATAVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWSEINVRVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVRVALGLTGEDDRGRGALVVPVEEEPEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGWRIGGRWGSRRDGVVYSKTVVALAAATAATAGVIVAVWKRRKA
Sbjct:    1 MWKSLSRAHVATAVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWSEINVRVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVRVALGLTGEDDRGRGALVVPVEEEPEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGWRIGGRWGSRRDGVVYSKTVVALAAATAATAGVIVAVWKRRKA 243          
BLAST of Ec-00_000350.1 vs. uniprot
Match: A0A6H5JHP7_9PHAE (HRDC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP7_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.610e-103
Identity = 219/278 (78.78%), Postives = 224/278 (80.58%), Query Frame = 0
Query:    1 MWKSLSRAHVATAVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWSEINVRVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVRVALGLTGEDDRGRGAL----------VVPVEEEPEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------ARGWRIGGRWGSRRDGVVYSKTVVALAAATAATAGVIVAVWKRRKA 243
            MWKSLSRAHVATAVLWRPSREAK EDAHSERHFRTAEQRL+PPRWSEINVRVYEDIF+WRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVR  LGL GED RG GAL          V+PVEEE EEEA   XXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X                            +RGWR+GGRWG RRDGVVYSKTVVALAAATAATAGVIVAVWKRRKA
Sbjct:  210 MWKSLSRAHVATAVLWRPSREAKREDAHSERHFRTAEQRLKPPRWSEINVRVYEDIFLWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVRARLGLPGEDGRGPGALGPPVDDGGALVLPVEEEREEEALRPXXXXDRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXELEGVARXXXXXXXXXXXXXXXXXXEHWSRGWRLGGRWGCRRDGVVYSKTVVALAAATAATAGVIVAVWKRRKA 487          
BLAST of Ec-00_000350.1 vs. uniprot
Match: A0A7S3UUB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUB7_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 2.160e-16
Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 0
Query:    5 LSRAHVATAVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWSEINVRVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVR 121
            L R     A LW P  + K  D   +R F+ A +  R  RW + +   +  +++WRDRTAR LDDG  Y+C  +TL+ VA  +P  +  LR V +PLSP LG+G     A L+R ++
Sbjct:   30 LLRCQKGVARLWEPKDKCKPGDHRRQRAFKAARRDRR--RWGDRHSAAFAALYLWRDRTARELDDGPHYLCSVETLVAVAQRLPPDLAALRSVQLPLSPALGDGGNALGAALLRTIK 144          
BLAST of Ec-00_000350.1 vs. uniprot
Match: A0A6U4D024_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D024_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.880e-5
Identity = 31/94 (32.98%), Postives = 48/94 (51.06%), Query Frame = 0
Query:   13 AVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWS---EINVRVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSP 103
            A LW P R         E + R  E      +W    ++ VRV++++F+WRDR AR  D+   Y+    +L+  A  +PTT+    +V+ PLSP
Sbjct:  156 AKLWLPRRIT------PESYKRVKEYNEVAKKWERKKDVRVRVFQELFLWRDRVAREEDESPEYIIDNRSLLTAAKLLPTTLVDTLKVSCPLSP 243          
The following BLAST results are available for this feature:
BLAST of Ec-00_000350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FHJ9_ECTSI1.710e-125100.00HRDC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JHP7_9PHAE1.610e-10378.78HRDC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3UUB7_HETAK2.160e-1638.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U4D024_9STRA5.880e-532.98Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.80coord: 39..130
e-value: 7.6E-12
score: 46.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 239..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..219
NoneNo IPR availableTMHMMTMhelixcoord: 219..238
IPR002121HRDC domainPFAMPF00570HRDCcoord: 51..97
e-value: 6.4E-8
score: 32.5
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 46..130
score: 10.673
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 45..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:530126..530857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000350.1Ec-00_000350.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 530126..531225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_000350.1 ID=Ec-00_000350.1|Name=Ec-00_000350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=244bp
MWKSLSRAHVATAVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWSEINV
RVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVP
LSPVLGNGDTPEAAELVRVVRVALGLTGEDDRGRGALVVPVEEEPEEEAL
GPPAEDDRGRGALGLPVEEEREWGVLGMPADNERVVGALGLPAEEHRARG
WRIGGRWGSRRDGVVYSKTVVALAAATAATAGVIVAVWKRRKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR010997HRDC-like_sf