Ec-28_002280.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_002280.3
Unique NameEc-28_002280.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length142
Homology
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BLAST of Ec-28_002280.3 vs. uniprot
Match: D7FXM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM3_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 1.220e-100
Identity = 279/525 (53.14%), Postives = 303/525 (57.71%), Query Frame = 3 
Query:   66 APLEALVGELKASAAESRGEDETGLRSSTSSLSSWTSLGFQERVATELLDCPIAAEFTPRLEYVSRVTKFF*RRSRRQETS--PPRVSYSPGWRAC---LRSGGGEGTATTPLSSRSGSLAAPHSATSSAPAVITLPRVSRKRKAVRSFRSGWPTGTTSRPSSLG------GRASSREFCLAHSGLLRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAPKCSLTFTTTWKSTARCWKLAPARATATTTNPQQRLRACP------SDFSTGQTTATXXXXXXXXXXXXXXXXXXXXXXXXXALGPTQRAAELPTARELTRTTMA----------GVGV*EAAAPPQRRRRRWEVEKGGRDILGVAGAASAGTVGAIRLVCRRWFWLRTLCTT*VSLRARRSGGGDAAE-MPRCPHRVRVY---LRNSETMAAFHRCLEEAGIVWQSVGFPSSEEALASQSDSSPPFREKARGESASDGSSRYPTAVRGSSRADSTELLWCHPGDLERVKFCVCGRGRGLVEPV 1547
            APLEALVGELKASAAESRGEDETGLRSSTSSLSSWTSLGFQERVATELLDCPIAAEFTPRLEYVSRVTK         ET+   P         AC   LR GGG    T   S      AA     S+            +     SFR        +R + +G      GRA + EFCLAHSGLLRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAP+         +      +    ++      P              +D+   + ++ XXXXXXXXXXXXXXXXXXXXXXXXX                                  VG  E  A                D LG+     A  V                      ++   +  G   E + RCP  + V+   LRNSETMAAFHRCLEEAGIVWQSVGFPSSEEALASQSDSSPPFREKARGESASDGSSRYPTAVRGSSRADSTELLWCHPGDLERVKFCVCGRGRGLVEPV
Sbjct:   15 APLEALVGELKASAAESRGEDETGLRSSTSSLSSWTSLGFQERVATELLDCPIAAEFTPRLEYVSRVTKVL---LEAVETAGDEPAEGLLLARMACVSSLRGGGGHSDDTAFESFWFPRRAALCDIISTGSDYSAKGFQEEEGGTFFSFR------VANRDNEVGLRVWEAGRALA-EFCLAHSGLLRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAPRVLANLHHNLEINRALLEAGAGQSNGNNDKPSTTPSGVSVRFLDWTDYCHHKASSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGSGEGGARHTXXXXXXXXXXXXXDSLGMPEVVLAADVV-------------------YDVKYHSALVGVVVETLRRCPDALIVFASTLRNSETMAAFHRCLEEAGIVWQSVGFPSSEEALASQSDSSPPFREKARGESASDGSSRYPTAVRGSSRADSTELLWCHPGDLERVKFCVCGRGRGLVEPV 510
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BLAST of Ec-28_002280.3 vs. uniprot
Match: A0A6H5JKR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKR7_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.400e-60
Identity = 158/332 (47.59%), Postives = 181/332 (54.52%), Query Frame = 3 
Query:  564 EFCLAHSGLLRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAPKCSLTFTTTWKSTARCWKLAPARATATTTNPQQRLRACPSDFSTGQTTATXXXXXXXXXXXXXXXXXXXXXXXXXALGPTQRAAELPTARELTRTTMAGVGV*EAAAPPQRRRRRWEVEKGGRDILGVAGAASAGTVGAIRLVCRRWFWLRTLCTT*VSLRARRSGGGDAAE-MPRCPHRVRVY---LRNSETMAAFHRCLEEAGIVWQSVGFPSSEEALASQSDSSPPFREKARGESASDGSSRYPTAVRGSSRADSTELLWCHPGDLERVKFCVCGRGRGLVEPV 1547
            EFCLAHSGLLRGKRVLELGAGIGMTGMAVAA+CGAAEVVLTDYAP+         +           R+      P       P   S      T              XXXXXXX      G T   +  P           G G    AA       RW    G R +    G   + ++G   +V                ++   +  G   E + RCP  + V+   LRNSETMAAFHRCLE+AG+ WQ VGFPSSEEALAS+S+ SPPFRE+ RGE  S GSSR   A+RGSS ADST+LLWCHPGDLERVKFCVCGRGRGLVEPV
Sbjct:    3 EFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEINRALLGAGDGRSNGDNDKPS----TTPWGVSVRFLDWTDYCRHNASSVSPAGXXXXXXXRADATSGGTADGSR-PDEXXXRGGRCLGGGCSCTAAAAVGSGERWARYTGTRRV-NECGGGESDSLGTPEVVLA--------ADVVYDVKYHSALVGVVVETLRRCPDALIVFASTLRNSETMAAFHRCLEDAGVAWQGVGFPSSEEALASESEKSPPFRERVRGEPVSSGSSRRQAALRGSSGADSTKLLWCHPGDLERVKFCVCGRGRGLVEPV 320
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BLAST of Ec-28_002280.3 vs. uniprot
Match: A0A6H5L2S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S8_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 5.960e-32
Identity = 71/92 (77.17%), Postives = 73/92 (79.35%), Query Frame = 2 
Query:  269 QVLLEAVETAGDEPAEGLLLARMACVSSLRGGGGHSDDTAFESFWFPRRAALCDIISTGSDYSAKGFQEEEGGTFFSFRVANRDNE*AFESG 544
            +VLLEAVETAGDEPAEGLLLARMA            D+TAFESFWFPRRAALCD  STGSD SAKGFQEEEGG FFSFRVANRDNE  F SG
Sbjct:   80 KVLLEAVETAGDEPAEGLLLARMA------------DETAFESFWFPRRAALCDGFSTGSDCSAKGFQEEEGGAFFSFRVANRDNEVGFFSG 159
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BLAST of Ec-28_002280.3 vs. uniprot
Match: A0A329SVC4_9STRA (FAM86 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SVC4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.330e-5
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 3 
Query:  564 EFCLAHSGLLRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAP 698
            E+ +AH    RG++VLELGAG+G TGMA+A  C ++ VVLTDYAP
Sbjct:  149 EYIIAHESEFRGRKVLELGAGVGFTGMALACVCRSSRVVLTDYAP 193
The following BLAST results are available for this feature:
BLAST of Ec-28_002280.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXM3_ECTSI1.220e-10053.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKR7_9PHAE1.400e-6047.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2S8_9PHAE5.960e-3277.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A329SVC4_9STRA3.330e-560.00FAM86 domain-containing protein n=2 Tax=Phytophtho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2078794..2087328 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2609
Hectar predicted targeting categoryother localisation
Gene idEc-28_002280.3
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002280Ec-28_002280Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 2078742..2087859 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002280.3Ec-28_002280.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 2078796..2079221 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002280.3.8Ec-28_002280.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2078794..2080148 -
Ec-28_002280.3.7Ec-28_002280.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2081120..2081198 -
Ec-28_002280.3.6Ec-28_002280.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2081885..2082355 -
Ec-28_002280.3.5Ec-28_002280.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2082756..2082891 -
Ec-28_002280.3.4Ec-28_002280.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2084095..2084134 -
Ec-28_002280.3.3Ec-28_002280.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2084967..2085221 -
Ec-28_002280.3.2Ec-28_002280.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2086032..2086238 -
Ec-28_002280.3.1Ec-28_002280.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2087263..2087328 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0022803UTR:Ec-28_002280.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 2078794..2078795 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002280.3CDS:Ec-28_002280.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 2078796..2079221 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0022805UTR:Ec-28_002280.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 2079222..2080148 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_002280.3 ID=Ec-28_002280.3|Name=Ec-28_002280.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=142bp
MAAWVLFLPSRGGGDVLAFSPSGVVITRLAHLRLPGRLQQRSLCRGVRDN
FPNFVQSRGLTMGRLVASPAKDDFLSREVVRKVYLRRHRNLDPLRAGGWS
HSLSFFSWTSMPHGHVVLCQEMWRERERRARVRDRIQTNGQT
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spliced messenger RNA

>Ec-28_002280.3 ID=Ec-28_002280.3|Name=Ec-28_002280.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2609bp|location=Sequence derived from alignment at chr_28:2078794..2087328- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TTCGTGTGTGACGAAGGGACGAGAATGGTCTCCCTGAAACGAGCCCTCCG
ACTCTACCTTCAGCAGGCTCCTCTGGAGGCACTCGTGGGGGAGCTCAAAG
CTTCCGCGGCAGAAAGCCGGGGGGAGGACGAAACTGGACTACGGTCGTCG
ACGTCGTCGTTGTCGTCGTGGACCTCCCTTGGTTTTCAGGAGAGGGTTGC
GACGGAGCTGCTTGACTGTCCAATCGCGGCGGAGTTTACTCCTCGCTTGG
AATACGTCTCCCGGGTCACCAAGGTTCTTCTAGAGGCGGTCGAGACGGCA
GGAGACGAGCCCGCCGAGGGTCTCCTACTCGCCAGGATGGCGTGCGTGTC
TTCGCTCCGGGGGGGGGGAGGGCACAGCGACGACACCGCTTTCGAGTCGT
TCTGGTTCCCTCGCCGCGCCGCACTCTGCGACATCATCAGCACCGGCAGT
GATTACTCTGCCAAGGGTTTCCAGGAAGAGGAAGGCGGTACGTTCTTTTC
GTTCCGGGTGGCCAACCGGGACAACGAGGTAGGCCTTCGAGTCTGGGAGG
CAGGGCGAGCTCTCGCGGAGTTCTGCCTGGCGCACTCGGGCTTGCTGCGA
GGGAAGAGAGTGCTGGAACTCGGCGCGGGGATCGGCATGACCGGCATGGC
TGTGGCTGCCACTTGCGGAGCGGCGGAGGTCGTCCTGACGGACTACGCGC
CCAGAGTGCTCGCTAACCTTCACCACAACCTGGAAATCAACCGCGCGCTG
CTGGAAGCTGGCGCCGGCCAGAGCAACGGCAACAACGACAAACCCTCAAC
AACGCCTTCGGGCGTGTCCGTCCGATTTCTCGACTGGACAGACTACTGCC
ACCACAAGGCCTCCTCCGTACCGCCAGCCGGCGGCAGCGGCGGCGACGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTTAGGGCCGACGCAACGAG
CGGCGGAACTGCCGACGGCTCGCGAGCTGACGAGGACGACGATGGCGGGG
GTGGGTGTCTAGGAGGCGGCTGCTCCTCCACAGCGGCGGCGGCGGCGGTG
GGAAGTGGAGAAGGGGGGGCGAGACATACTGGGAGTGGCGGGGGCAGCGA
GTGCGGGGACGGTGGGGGCGATTCGCTTGGTATGCCGGAGGTGGTTCTGG
CTGCGGACGTTGTGTACGACGTAAAGTATCACTCCGCGCTCGTAGGAGTG
GTGGTGGAGACGCTGCGGAGATGCCCCGATGCCCTCATCGTGTTCGCGTC
TACGCTTCGGAACTCCGAGACAATGGCAGCTTTTCACCGGTGCCTCGAAG
AAGCCGGGATCGTGTGGCAAAGCGTGGGTTTCCCTTCCTCCGAGGAGGCC
TTGGCGAGCCAATCGGACAGCTCGCCGCCGTTTCGAGAAAAGGCTCGAGG
AGAGTCCGCGTCCGACGGTAGCAGCCGCTACCCAACGGCTGTGCGGGGAT
CAAGTCGTGCGGACTCGACAGAACTGTTGTGGTGTCACCCAGGAGACTTG
GAGCGGGTGAAGTTTTGCGTTTGCGGGCGGGGGCGAGGGCTTGTCGAGCC
CGTATAGGGAATGTCTGATTGTGTTTTCGTGCTTCGATGGGGGAGCCAGG
GTTCAACACCTTCCTTACAGGAGCTGTATAGACGTAGGGAATGTCTGACT
GCTGCTTGAGTTTTCGCGTTTCCATGGAAGCCAGTATCCGAGATGAGGTA
CACCCACATGGCTGGGCGTAGTAAGGAGCTGGAGCCTGGAGGACGTTTTC
GCATCCATGCCTCCGAAGATGTGCACCTTGAACGTGCTGCCGAACGCCGC
ACGAGAATTAACGTAGAGTTGGATGTTGGAAATGAGAATCGATCGTGTCC
ACGAACGGCGGCGCGCTGTCTCTTTTCTCAAAATTTTGTTTTTTGCTCGA
GTACCCTCGGCCGCGCTTGGTACTTCACGTCAAACATGCCGAGAGAGAAC
ACGAGCCTACGCTTGGACCGTTGAACTATGTGCTTCAATATAGGCCATGA
CTCGGTAGAGTTGCGGGGGAGATCAGCAGCGTTCAACGAAGACTTGGATC
CTGACCACCCGGCAGACATTCAATGTGCCACGCGCCACGAGCAACTCGAA
GAACACCCGGGGTCAAGGCCGCAGTGGCGGTCTCCCGACTCCCAGACAAA
GGGACAAGCGGCCAGGCCGTGAAATTTGTTGATGGCGGCATGGGTATTAT
TTCTTCCTTCGAGGGGGGGGGGCGATGTTCTGGCCTTCTCTCCCTCCGGC
GTTGTGATCACGAGACTGGCACATCTTCGTCTGCCGGGTCGCCTGCAACA
ACGGAGTCTCTGTCGGGGCGTTCGTGACAATTTCCCTAACTTTGTTCAAT
CAAGGGGTCTCACGATGGGGCGACTTGTCGCTTCACCGGCGAAGGATGAT
TTTCTCTCGCGAGAGGTGGTGAGGAAGGTGTACCTCCGAAGACACCGGAA
CCTTGACCCACTAAGAGCTGGGGGGTGGTCTCACTCGCTTTCATTTTTTT
CGTGGACTTCGATGCCCCACGGCCACGTCGTCTTGTGTCAGGAGATGTGG
CGGGAGAGAGAGAGGAGGGCGAGAGTGAGGGACAGAATACAGACAAACGG
ACAGACGGA
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protein sequence of Ec-28_002280.3

>Ec-28_002280.3 ID=Ec-28_002280.3|Name=Ec-28_002280.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=142bp
MAAWVLFLPSRGGGDVLAFSPSGVVITRLAHLRLPGRLQQRSLCRGVRDN
FPNFVQSRGLTMGRLVASPAKDDFLSREVVRKVYLRRHRNLDPLRAGGWS
HSLSFFSWTSMPHGHVVLCQEMWRERERRARVRDRIQTNGQT
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mRNA from alignment at chr_28:2078794..2087328-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_002280.3 ID=Ec-28_002280.3|Name=Ec-28_002280.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8535bp|location=Sequence derived from alignment at chr_28:2078794..2087328- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TTCGTGTGTGACGAAGGGACGAGAATGGTCTCCCTGAAACGAGCCCTCCG
ACTCTACCTTCAGCAGGTGAAGATTTTGTCTCCTGTGGTGTGGAAGTGCC
TCCTCTCTCCCGCCCCGAAGGTCCCCCTTGTCCTGATGTCGCCATGCGCA
GCAACAGCAGTTCCTTGGTGAAAGCACACCCTACAACGTATATTCGAAGA
TGTTTTGGACCGTGGAATCCCACAGCAGCAGCAGCAGCAGCAGCAGAGTG
TCAATGCACCCCGCGTTCCATGTCGCACCGATTTAGCGTGTGGACCCCAC
CCGACCCTGGCATGCAAACGGCAGAGCTGTTCCGCCGTCAGAGCAGTAAA
GAGGGTATGTGTAATCGTTTGTATGCACAACATGCGCAGATATAGTCTAT
GTACGTGGTATTATACTTGTAGGAGCATGGGCAAGGATCTCGAGGAGATT
CGCTGCGAGAGATATACAGTACAGCAGTACGACAGCTATCCAGCAGCCCA
GCAGCAGTAGTAGATTATGCATGCAAAACATGAGATACGACAATGGTGTG
AAAATTGCATGCAAATGTTCCTTGTGTTCACAACCACTCAACCCTCTCCC
GAGAAACATAACGCAGTACCATGTTTGTCGAACTATGGAGCAGCGCTGAT
CAGCATGTTCGTCCGAGGGGAAACACTCGCAGTCAGCCAACCCTTCGTGA
TCAATTGTCTTACGGAAAACGTGCAACACCTGCAGTTCTTGGTCTTATAT
TTACCTCAACACACCATCGTGCGCAGTATCACCCAACTTTAAAATGTAGC
GGCTACATACCTGTAGGCTGAATAGGGCAGCCCTTCCCGCACCCCCAGTA
TGGGATGGGAACAAAATGTTGTTGTTTCTTATCTTGTCGTGGCCCCAAAG
CTGTGAGCTCGGAGTTTTTTTCTAGATTCCACGCGCCCAAAGAACAAAGC
GATGAGGCACACGGTCTTCACCGGTAAGCCATTTAGCGCTGCCGGTGCTG
GAGACACACACACGACATGTGCATCACACCTCCTCCCCCTATTAACTTGC
GAATGATTCTGCGGTGACCCCACCCCTCCTCGCCTGCAAGGCTCCTCTGG
AGGCACTCGTGGGGGAGCTCAAAGCTTCCGCGGCAGAAAGCCGGGGGGAG
GACGAAACTGGACTACGGTCGTCGACGTCGTCGTTGTCGTCGTGGACCTC
CCTTGGTTTTCAGGAGAGGGTTGCGACGGAGCTGCTTGACTGTCCAATCG
CGGCGGAGTTTACTCCTCGCTTGGAATACGTCTCCCGGGTCACCAAGGTG
CGAGAAAGGACGTGAAAACGAAACGAGATGTTGTCGTGCTTGATGTGATG
CCAACCTCCTTGCAGTATATATAGCCTTCGCGAGGGTATAAAGCTCGGTG
ATAGCAGGGGGGTTGGTTGGGGATGAGGGTTAGGGATACGAAACCCCCCG
TCCCTATCGTCGTCCAAGAACCCAAAGAATGTACTTCTGAAATTGAATAA
GAATCCTTTTTACAAGAAAATATTGGAGAAGGCGGTCCCGTCCTTGGGGC
CATGGGGCCATATTGCACCCACCTCTGCGTTCGAACAGCTTCTTCTTACC
GCACGTTTGCGTGCAAATGCTTGGCACCCACCTCTGCGTCCGAACAGCTT
CTTCTTACTGGATGTTTGCGTGCAAATGCTTGGAGTGAAAGTTGGCGGCC
TGGAAACCCAACCGGCGTGTTCCGGAGCGCGACTGTTCTATACGTCTATG
CCCGGGGTCTGGATTACGGAACATGCACTGCGAGGGTCAAAGCATCAAGC
TTGTTAAACAAAGTTGGGTCCAAAAATCTTTGGAATGCATGTTCGCGGTC
GTTCGCCCTCGTCGAGTGGTTGAACCCATCCTCTTGTGTGTGGACTACGT
CGTCCTGCGGCTAGCTTCTTGGGTAACCTCGACAAGGCCAACGCGTTCGG
GGTGGTCACTTCCAATCAACGGCGGCCTCCCCCATGCACTACTGTACAGC
ACGCTTTGAACAAGAAACCGACGTTTGTCTTTGGCCAGACAGACATGCTG
TGAGCGCTGATTAAAAAATGAAAATAACAAAACACGGCGGCGGCGGCGGT
TCGACAGGTTCTTCTAGAGGCGGTCGAGACGGCAGGAGACGAGCCCGCCG
AGGGTCTCCTACTCGCCAGGATGGCGTGCGTGTCTTCGCTCCGGGGGGGG
GGAGGGCACAGCGACGACACCGCTTTCGAGTCGTTCTGGTTCCCTCGCCG
CGCCGCACTCTGCGACATCATCAGCACCGGCAGTGATTACTCTGCCAAGG
GTTTCCAGGAAGAGGAAGGCGGTACGTTCTTTTCGTTCCGGGTGGCCAAC
CGGGACAACGAGGTGGGATTTTTTTTCGGAATCCGTATGTTTTGCAGTTG
GTGGGTAGGAACCCACAGCCCTGGCTGTTTTATGTCCTTTCTGTTGTATT
TTTGTACGTGGAGCCGCTGCCGCCCCGTGTCGAACGCTTGTAAGGCCATC
TTCGTTTGCACGGCGTTTTGCGAGTCTCTGCCTGAAGTTGTCGCGACTGA
AAACTTCCACGCGCAGCAGCTTTTTTCCCATTCACACTGTTCCTACTACG
CTCGTGATTGTTCTCTCATCACGGCAGGTGCAACACATGGTCCGGGGGAC
CTGCCATGGAGCTTTTCATTTTCGTATCCCCCCCTTCGTGTTGCTCCCGG
GTTGACAGGCGCGCATTGTTGCGCACAATAATCAAGGAGTGATTCCCGCG
ATGATGGATGTTGGGTGTTCACATGTTTCCAGTGCATATGGCTGGCGCAC
CCTTCCCTCACATGCATATTCGTCTGCTTTTGTTGTTGCTGTTGTTGTTG
TTATTATTGTTGTTGCCTTGACATCAAAACTGTTCCGGTCTCTACTCTAC
ACCTTGTACCATCCGTAACTGACTCCGACACCTTTGGTGGTCACACGGCC
AACTACCCAAACAGGGTTCACTTCCATTAACACCAAAATGGAGAACTTCG
GCTCGTTAGGATTTGATCAACCTGATGCCTTGTCGACGATACAACAGTGC
TCGCTGTCGGCGAGCAGCGATTAGACTTGCCCTGGCGCCGCCGCCCCCTC
CCTCCGTGGCTTCGTTCGTTGGTGACTCGTCTCTTTCCTGTCTTCTGATT
AGGCACGCATCAACCCCGCCCTCCCCCCTGGCTGCCCCCGATAGGTAGGC
CTTCGAGTCTGGGAGGCAGGGCGAGCTCTCGCGGGTGAGTGATCTCTATC
TGCCTGGTTTTGAGCTAGCCACAAGATGCGAGAGGCTGGGCACACACGGC
AGATGATCTTTTCTGCATGCATGTGTATGCACCGCGCACAATTCGGTGAT
TCCTACCCCCCCGCGGTTCCCTCCGAACTATTCATTTTCGTGACTTTAGG
AGGTGGTGGTGTGTTGGCGTTGGGGATAGTCCTAGGGATCACGGTTTTCT
CTTCAGAACGAAGGTATGCTGCATGACCGACCCTCGGGGGATTTCCGCCA
TTTTCTCCCACGTATACTGGTAGAGCTCGCTCGTGAAAGCCAACAGGGTG
TTTGTAGATGGGAGGGGGAGGAGGTGTGGTCGTGCCTATGCGGTACTGCG
TGGGGGTCCCTTTTTTTAGCACTGAACTGGCGTTCTTTGGCGAGCCCCAT
CACAAAGGACCGGTGTCGAAAAAACAGGCTAATTTCCTCCAACGCTACCG
CCGAGACGGCGAGTATGTCGACACTCAATACCACGCATTTGTCTCTTTGC
GTTACAGCCTACCAGTTTTGCCGGTTGCTCCCAGCGGATGGGAGGTTTCG
TTCCTAGAGATAACCGCAGTCCTAGGCTGCCGAGGCACACGTTCGCTCCT
TCGCGTTGTTGCGTCCGACCAATAGTAGGAGACTCGGCCTTGAAATGTGC
TGTACGGGGGGAGTGGCTTAGGTGGTACCGGGCGCTCTCGCATCGAATAC
AGTGACAAAATTCTACGGTAGTCTTGTTCACGAAAGAGTCCACTCTATTG
GGACATCCCGTCATCGACTGTTTTTCCTATTTTCAGTAACCCCCGCCACA
GCTTTCTTGCTCGTGTTGGCACTTTTTTTTGTTGTAGCGAAGCCCGAACT
ATATAGTGCTTGGGTTGCTGTGGTACTGCTTAATTGCCGCGCGACTTTAG
TGTTATCCGCCACCTTCTGTGGTGCTTTCGTGCCGTCCCTGCTGTGGTAC
GGTGTGCCCACTCTGCTGCCGGCGTTCCCACGCCAACACGCCCGCGCCAC
CCCGCCTTAGCTACACTTGCTCCGGCTACACTTGCTCCGGTCGGCCCTTT
TCTCTACTACTACTACTACTGTTACTACTGCTACTGCTACTATGCTGCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTATAATCCCCACTACTCTACTGCAA
CTGCTGCTGCTGCTGCTGCTGGTGTCATTCCTGAAAGAGTTCTGCCTGGC
GCACTCGGGCTTGCTGCGAGGGAAGAGAGTGCTGGAACTCGGCGCGGGGA
TCGGCATGACCGGCATGGCTGTGGCTGCCACTTGCGGAGCGGCGGAGGTC
GTCCTGACGGACTACGCGCCCAGGTACGAGGAGTTTTTTTTTGTTTTTTT
TTGTTTTTTTTTCACTCTTTCCCCCACTCTACCTCTTCGGAGAAGATAAG
AACAACCACAACCATCTCGTCCTCTCGGTCGGGACGGACGGATTCTTGGA
ACCAATGCAGATTTTTTTTTTCTTTTTGTGGAAAATTGGTGGTGGGTGTG
TTCAACGAAAATGCTTGAAATCGGTGACGAAAACGGATACCTCTGTCCGG
CCTCTGAGAATAGTTCTTTTTCTATCCTATCAGGTCATTTCTGACATAAT
CTCCGAAATTTCCGACGAAATGCCTTCGAGGGCGCACCTCACTGCATGAA
CACTACCACCACCCCAAATGGTCTGCCCCACTCCACGAACGCCGCCCCTT
CTCTCGACTCCTGCACGCCAAAGAGTGCTCGCTAACCTTCACCACAACCT
GGAAATCAACCGCGCGCTGCTGGAAGCTGGCGCCGGCCAGAGCAACGGCA
ACAACGACAAACCCTCAACAACGCCTTCGGGCGTGTCCGTCCGATTTCTC
GACTGGACAGACTACTGCCACCACAAGGCCTCCTCCGTACCGCCAGCCGG
CGGCAGCGGCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
TTAGGGCCGACGCAACGAGCGGCGGAACTGCCGACGGCTCGCGAGCTGAC
GAGGACGACGATGGCGGGGGTGGGTGTCTAGGAGGCGGCTGCTCCTCCAC
AGCGGCGGCGGCGGCGGTGGGAAGTGGAGAAGGGGGGGCGAGACATACTG
GGAGTGGCGGGGGCAGCGAGTGCGGGGACGGTGGGGGCGATTCGCTTGGT
ATGCCGGAGGTGGTTCTGGCTGCGGACGTTGTGTACGACGTAAAGTGAGA
AAGGCGGTGTCGTGACTTTTGCTTGGCGGAAAGATTATTGTTTGGTCCGT
TCTGTTTCGTGTAGTGGTGCCGGCGCTGGTTTTGTGCTTTGTACGGGACA
ATGTCTCTCTCCCATGATCACCCCATTTTTTTTTACCACGCGTTTCCAGC
TTCTTAAGATATCTTGATCGCTGGGTCCCTGTGCTATGCCTTGGATCGTC
GTAGGCTTTGCCGCACGGATGACTGTGCATTAGGCGCAGCTTCTCTGACC
AGACACTACGCCTCGCACAACTTAGTAGGCGCAGCTTCCCTGAGAGACTA
CGCCTGGCGCAACTTAGTTGCCCCCGACGCTCGCTCAGCTCTTTTTCGCG
CAGCTTGCGGAGAGGACACCCTGGTTGTGCGGCGCGCTTGTAGGGTAGTG
GATTTTCGTTTACACACACAGAGGGATCGGCGCTGGGCTATAGCCCACAG
TAGAGCTCTCCAAGGGCAGCTTCTACACCTGAAGCACGCAAGTCCGTGTT
GAGATTTCTCAAGCTCGTGAGCAGTCCGCTCTTGTTGTTGTTGCCTGCTT
GTTGCGCATTCCATCCGCATTGTCAAACGCGCTCGTTTTCGTTTGTCGTG
TGCATCCTTCTATGCACGCGCGCTCTTCTTCATTTGTGGTTGGCGGCGGC
GCGATTTTCGGTCGGCGGGGGGGGGGGCAGGTATCACTCCGCGCTCGTAG
GAGTGGTGGTGGAGACGCTGCGGAGATGCCCCGATGCCCTCATCGTGTTC
GCGTCTACGGTAAGCGGACAGACCGTCTTTGTTGACGTATCGTGTGCACG
CAAGCGTGAGCCGTGATCGACGTCGTCGTCGTGATTGCCAGTCGTTGCCA
TATTGGAGATAGCGCCAGCCCTGGGAAGGGCGCATCGGTGTCGAGAACGT
CGCCTGGAACGTTCTCCTACGAACAAGACGTGGATTCGGTCTTGGCGTTT
AGGCTCCCTCGTCGTACACGTTTTGGCAAACCGAGGTCGGACACTCTGTC
CGGGGTGCGTTTGCTGGTCGAGCACGCCGTGTTTTCGTGCCACCACGGGC
TCTCGTTCTCATCGCATCGCTCCACACCCCACCCCTGACTCCATGGGGGG
CGTTGATGGGCTGGTGCGCTTGGGAAGAAAACTAAACAGCGCTGACGGTC
AATGGGCAAGACGTAAAGTTGGAAGGCGTCGTCGAATGAAAGTACTTGCT
GCGATGACAAGTACAGTAGTCGCAGCAGACCGGGTAGCAGCAGCGGCAGC
AGTTGCGATCTGGAAAGAGGAGGTACGCGCTTGTCTTTCTTCGGTCGGTC
AAAAGATGTTAGACAAACACAGCGTTCAGATTCTACATCGATGAAGTTTA
TTGTCGTAGGGGGTTTGGGCATCGCTCTTTACTACGCCCGTGGGAGATTT
GTAGGACTGTCGGAAATGATGTGGACCCTGGCATCCCCTTCGAAAACGTG
ACAAGACGAAAGGAATGCCTCGGCATGCAGTGAGCGAGAGTGTTTAAACC
AAAACGATTTTTGCCGGCACTCGCTTTGATGCCACACCCGGCGGAATTAG
AGGAGCCCCAAAGTGCGCTTTGTAACGTAGATATTGAGGATGTACGGCGG
TAACATGCTCCAGAACACACGCCCGCGACATCCAGCACACCTCCAAACCC
ACGCATACCCCCCTCCCTTCACGGCACTCTCCGCGTGTCCCCTTACTCCC
CATCCCCCATCCCCCGCCCCCCCCCGACAGCTTCGGAACTCCGAGACAAT
GGCAGCTTTTCACCGGTGCCTCGAAGAAGCCGGGATCGTGTGGCAAAGCG
TGGGTTTCCCTTCCTCCGAGGAGGCCTTGGCGAGCCAATCGGACAGCTCG
CCGCCGTTTCGAGAAAAGGCTCGAGGAGAGTCCGCGTCCGACGGTAGCAG
CCGCTACCCAACGGCTGTGCGGGGATCAAGTCGTGCGGACTCGACAGAAC
TGTTGTGGTGTCACCCAGGAGACTTGGAGCGGGTGAAGTTTTGCGTTTGC
GGGCGGGGGCGAGGGCTTGTCGAGCCCGTATAGGGAATGTCTGATTGTGT
TTTCGTGCTTCGATGGGGGAGCCAGGGTTCAACACCTTCCTTACAGGAGC
TGTATAGACGTAGGGAATGTCTGACTGCTGCTTGAGTTTTCGCGTTTCCA
TGGAAGCCAGTATCCGAGATGAGGTACACCCACATGGCTGGGCGTAGTAA
GGAGCTGGAGCCTGGAGGACGTTTTCGCATCCATGCCTCCGAAGATGTGC
ACCTTGAACGTGCTGCCGAACGCCGCACGAGAATTAACGTAGAGTTGGAT
GTTGGAAATGAGAATCGATCGTGTCCACGAACGGCGGCGCGCTGTCTCTT
TTCTCAAAATTTTGTTTTTTGCTCGAGTACCCTCGGCCGCGCTTGGTACT
TCACGTCAAACATGCCGAGAGAGAACACGAGCCTACGCTTGGACCGTTGA
ACTATGTGCTTCAATATAGGCCATGACTCGGTAGAGTTGCGGGGGAGATC
AGCAGCGTTCAACGAAGACTTGGATCCTGACCACCCGGCAGACATTCAAT
GTGCCACGCGCCACGAGCAACTCGAAGAACACCCGGGGTCAAGGCCGCAG
TGGCGGTCTCCCGACTCCCAGACAAAGGGACAAGCGGCCAGGCCGTGAAA
TTTGTTGATGGCGGCATGGGTATTATTTCTTCCTTCGAGGGGGGGGGGCG
ATGTTCTGGCCTTCTCTCCCTCCGGCGTTGTGATCACGAGACTGGCACAT
CTTCGTCTGCCGGGTCGCCTGCAACAACGGAGTCTCTGTCGGGGCGTTCG
TGACAATTTCCCTAACTTTGTTCAATCAAGGGGTCTCACGATGGGGCGAC
TTGTCGCTTCACCGGCGAAGGATGATTTTCTCTCGCGAGAGGTGGTGAGG
AAGGTGTACCTCCGAAGACACCGGAACCTTGACCCACTAAGAGCTGGGGG
GTGGTCTCACTCGCTTTCATTTTTTTCGTGGACTTCGATGCCCCACGGCC
ACGTCGTCTTGTGTCAGGAGATGTGGCGGGAGAGAGAGAGGAGGGCGAGA
GTGAGGGACAGAATACAGACAAACGGACAGACGGA
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Coding sequence (CDS) from alignment at chr_28:2078794..2087328-

>Ec-28_002280.3 ID=Ec-28_002280.3|Name=Ec-28_002280.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=426bp|location=Sequence derived from alignment at chr_28:2078794..2087328- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGCATGGGTATTATTTCTTCCTTCGAGGGGGGGGGGCGATGTTCT
GGCCTTCTCTCCCTCCGGCGTTGTGATCACGAGACTGGCACATCTTCGTC
TGCCGGGTCGCCTGCAACAACGGAGTCTCTGTCGGGGCGTTCGTGACAAT
TTCCCTAACTTTGTTCAATCAAGGGGTCTCACGATGGGGCGACTTGTCGC
TTCACCGGCGAAGGATGATTTTCTCTCGCGAGAGGTGGTGAGGAAGGTGT
ACCTCCGAAGACACCGGAACCTTGACCCACTAAGAGCTGGGGGGTGGTCT
CACTCGCTTTCATTTTTTTCGTGGACTTCGATGCCCCACGGCCACGTCGT
CTTGTGTCAGGAGATGTGGCGGGAGAGAGAGAGGAGGGCGAGAGTGAGGG
ACAGAATACAGACAAACGGACAGACG
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Synonyms
The feature 'Ec-28_002280.3' has the following synonyms
Synonym
Esi0033_0112
Esi_0033_0112