Ec-28_002060.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_002060.2
Unique Name	Ec-28_002060.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	140

Homology

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE)

HSP 1 Score: 1096 bits (2835), Expect = 0.000e+0
Identity = 635/707 (89.82%), Postives = 643/707 (90.95%), Query Frame = -2

Query: 3760 ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAH---PPLSQRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSASIAPPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAG 5871
            ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXX       PPLS RAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSA+IAPP+      TSL GHGS   XXXX  GGLHMFAAMFATREDVEATLR KRPPDK PDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGRE F LLDA  FSPV QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLP+GCGRLSGLIVKL KSLYGLKQASR WHAHLTRCLLLLGFVQCLADACVFR MED CVIMIIVV VDDIFAVGQK RCDKFG DLN+MVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVS+KLTDFDE+EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTG+SMQVF+DADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDA 
Sbjct:  633 ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXWTSRTYTHTPPTAXXXXXXXXXXXXASPSIFTGSGAPSPISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLSHRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSANIAPPSPPPPQDTSLVGHGSGGAXXXXGPGGLHMFAAMFATREDVEATLRAKRPPDKTPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGRESFVLLDACPFSPVLQPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPRGCGRLSGLIVKLYKSLYGLKQASRHWHAHLTRCLLLLGFVQCLADACVFRLMEDICVIMIIVVPVDDIFAVGQK-RCDKFGSDLNDMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGISMQVFLDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAA 1338

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 918 bits (2372), Expect = 1.730e-297
Identity = 511/784 (65.18%), Postives = 520/784 (66.33%), Query Frame = -2

Query: 3520 ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAHPPLSQRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSASIAPPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIQIFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVASEFQHADFLTKAISKESFALHRDFVMNLQ 5871
            ADTGRICLSNNVVWINRRTAVPAPVPASG                                                                                        AP+  P +                    DRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSA+IAPPA      TSLAGHGS         GGLHMFA MFATRED                                                                                                                                     LCHFDIQQAFVQSELEEDVF+RLPQGCGRLSG+IVKLCKSLYGLKQASRQWHAHLTRCLLLLGFV+CLADACVFR MEDGCVIMIIVVHVDDIFAVGQKERCDKFG DLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVS+KLTDFDE+EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCI +FEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHV SEFQHADFLTKAISKESFALHRDFVMNLQ
Sbjct:  840 ADTGRICLSNNVVWINRRTAVPAPVPASGGGSSVTA---------------------------------------------------------------------------------APS--PAAAXXXXXX-------------DRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSANIAPPAPPPPQDTSLAGHGSGGAARAGGPGGLHMFAPMFATREDXXXXXXXXX-------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHFDIQQAFVQSELEEDVFLRLPQGCGRLSGMIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVRCLADACVFRLMEDGCVIMIIVVHVDDIFAVGQKERCDKFGSDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 1472

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5KCR3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR3_9PHAE)

HSP 1 Score: 909 bits (2348), Expect = 1.150e-295
Identity = 590/812 (72.66%), Postives = 595/812 (73.28%), Query Frame = -2

Query: 3520 ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAH---PPLSQRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSASIAPPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRS-------------------------VSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIQIFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVASEFQHADFLTKAISKESFALHRDFVMNLQ 5871
            ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXX       PPLSQRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSA+IAPPAXXXXXX        XXXXXXXXX GLHMFAAMFATREDVEATLR KRPPDK PDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDA                        DEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHL RCLLLLGFV CLADACV R MEDGC                                                                                                                 TQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQ+ VDADYASKAADRRS                         VSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCI +FEDNQGAIQIA+NPITNSNSK+IDVRHHFIRELVERKEIS THV SEFQHADFLTKAISKESFALHRDFVMNLQ
Sbjct:  633 ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXWTSRTYTHTPPTAXXXXXXXXXXXXASPSIFTGSGAPSPISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLSQRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSANIAPPAXXXXXXXXXXXXXXXXXXXXXXXXGLHMFAAMFATREDVEATLRAKRPPDKTPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDA------------------------DEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLARCLLLLGFVLCLADACVLRLMEDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------TQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQMLVDADYASKAADRRSXVXXXXXXXXXXXXXXXXXXXXXXSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAYNPITNSNSKYIDVRHHFIRELVERKEISTTHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 1343

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 847 bits (2188), Expect = 1.030e-285
Identity = 416/438 (94.98%), Postives = 428/438 (97.72%), Query Frame = -2

Query: 3520 MQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIQIFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVASEFQHADFLTKAISKESFALHRDFVMNLQ 4833
            MQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSEL+EDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASR WH+HLTRCLLLLGF+QCLADACVFR ME+G VIMIIVVHVDDIFAVGQKERCDKFG DLNEMVPVKNLGELRWYSACFY+RD+ERGLLRISQQRFAEELAAEYG+EWG+SVPLPVS+KLTDFDE+EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKA DRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCI +FEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHV + FQHADFLTKAISKES  LHRDFVMNLQ
Sbjct:    1 MQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMNLQ 438

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5K5Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y3_9PHAE)

HSP 1 Score: 842 bits (2176), Expect = 6.800e-277
Identity = 478/759 (62.98%), Postives = 497/759 (65.48%), Query Frame = -2

Query: 3640 APAHPPLSQRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLP-----------------------------------------------------------------------------PSASIAPPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGT-----------------------FSPV*QPVENFINAKWV--FNCK------------------------------ADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIQIFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELV 5520
            AP HPPLSQRAVRELGEKETRV+GRTRGDRVRFMDEQ+QPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLP                                                                             P A+IAPPA      TSLAGHGS         GGLHMFAAMFATREDVEAT+R KRPPDK  DLPHCLASDLRVPKTFKEAMRSQHS LW DAVGREFFGLLDA                         F  +  P  +  + + +    C+                               DEYGWPTKFKARL A+GDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQAS QWHAHLTRCLLLLGFVQCLADACVFR MEDGCVIMIIV+                                                                              + + DFDE+EACADVP RELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRT WMG TFERGVVT MSMQVFVDADYASKAAD RSVSGGLVM GGG VTWFSRTQ CVTLSTTEAEYVAIADVLKE+LFLRQ WRFMLPDAGMPCI +FE+NQGAIQIAHNPITNS+SKHIDVRHHFIRELV
Sbjct:  207 APHHPPLSQRAVRELGEKETRVYGRTRGDRVRFMDEQEQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDQGCRDLPPPANIAPPAPPPPQDTSLAGHGSGGPAGAGGPGGLHMFAAMFATREDVEATIRAKRPPDKT-DLPHCLASDLRVPKTFKEAMRSQHSALWVDAVGREFFGLLDADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSDLQEDVFMRLPQGCDEYGWPTKFKARLAAQGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASPQWHAHLTRCLLLLGFVQCLADACVFRLMEDGCVIMIIVM------------------------------------------------------------------------------LAVADFDENEACADVPIRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTRWMGTTFERGVVTDMSMQVFVDADYASKAADHRSVSGGLVMYGGGYVTWFSRTQMCVTLSTTEAEYVAIADVLKEMLFLRQGWRFMLPDAGMPCIPVFEENQGAIQIAHNPITNSDSKHIDVRHHFIRELV 886

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5KGB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB0_9PHAE)

HSP 1 Score: 820 bits (2118), Expect = 1.030e-275
Identity = 408/443 (92.10%), Postives = 412/443 (93.00%), Query Frame = -2

Query: 3835 MFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEY 5163
            MFAAMFATREDVEATLR KRPPDK PDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDA                        DEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFR MEDGCVIMIIVVHVDDIFAVGQKERCDKFG +LNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVS+KLTDFDE+EACADVPFRELVGSLMWL T+TRPDIANAVR VARYCASP MVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEY
Sbjct:    1 MFAAMFATREDVEATLRAKRPPDKTPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDA------------------------DEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRLMEDGCVIMIIVVHVDDIFAVGQKERCDKFGSELNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLTTRTRPDIANAVRPVARYCASPTMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEY 419

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 810 bits (2092), Expect = 8.680e-269
Identity = 416/667 (62.37%), Postives = 496/667 (74.36%), Query Frame = -2

Query: 3523 PPLSQRAVRELG-EKETRVHGRTRGDRVRFMDE-QQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSASI---APPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIQIFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVASEFQHADFLTKAISKESFALHRDFVMNL 5508
            PPLS RA REL   +ETRV GR RG RVRF D   ++  SP G G AL HR GL+S+  K  L+S+L TR  VD GR+++P SA     A P       T   G                  A + A+RED++  +R   PP+  PDLP C ASDLRVPKT++EA+ SQH++LW  +V +EF GL++A                                                D GE +APTV+VSSVRLLAA+ACEQNL L HFDI+QAFVQS+L+EDVFMRLP+GCGRLSG+IVKL KSLYGLKQASRQWH+HL RCL+ LGF+QC+AD CVFR +E+G V++ +VVHVDDIF++G++ERCD+FGRDLN MVPVKNLG+LRWYS CFY+RD + G L+ISQQ +AEEL  E+GVE+GK +PLPV +KL++FD+DE     PFREL+GSLMWLATQTRPDIANAVRAVARYCASPK +HW+A LGILGYV RTS +GITF RG V G+SM+VFVDADYASKAADRRSVSGGLVMCGGGC++WFSRTQKCVTLSTTEAEYV++ADV+KEVLFLRQVWRFMLP+AGMPCI +FEDNQGAIQ+A NPI+NSNSKHIDVRHHFIRELV RKEISI HV S +QHADFLTKA+    F  HR++VM++
Sbjct:    2 PPLSARANRELDLGRETRVPGRLRGRRVRFQDGGAERSTSPGGSGDALAHRFGLVSLQDKATLLSTLTTRSIVDGGRKEIPSSAGGRDGAEPGGREREGTKTEGLREEVPFAC---------ATLLASREDIDRAMRDLDPPEVAPDLPQCYASDLRVPKTYREAVSSQHADLWIHSVEKEFRGLMEA------------------------------------------------DCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611

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BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 798 bits (2062), Expect = 9.940e-257
Identity = 406/652 (62.27%), Postives = 486/652 (74.54%), Query Frame = -2

Query: 3523 ETRVHGRTRGDRVRFMDE-QQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSASI---APPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIQIFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVASEFQHADFLTKAISKESFALHRDFVMNL 5466
            ETRV GR RG RVRF D   ++  SP G G AL HR GL+S+  K  L+S+L TR  VD GR+++P SA     A P       T   G                  A + A+RED++  +R   PP+  PDLP C ASDLRVPKT++EA+ SQH++LW  +V +EF GL++A                                                D GE +APTV+VSSVRLLAA+ACEQNL L HFDI+QAFVQS+L+EDVFMRLP+GCGRLSG+IVKL KSLYGLKQASRQWH+HL RCL+ LGF+QC+AD CVFR +E+G V++ +VVHVDDIF++G++ERCD+FGRDLN MVPVKNLG+LRWYS CFY+RD + G L+ISQQ +AEEL  E+GVE+GK +PLPV +KL++FD+DE     PFREL+GSLMWLATQTRPDIANAVRAVARYCASPK +HW+A LGILGYV RTS +GITF RG V G+SM+VFVDADYASKAADRRSVSGGLVMCGGGC++WFSRTQKCVTLSTTEAEYV++ADV+KEVLFLRQVWRFMLP+AGMPCI +FEDNQGAIQ+A NPI+NSNSKHIDVRHHFIRELV RKEISI HV S +QHA+FLTKA+    F  HR++VM++
Sbjct:  538 ETRVPGRLRGRRVRFQDGGAERSTSPGGSGDALAHRFGLVSLQDKATLLSTLTTRSIVDGGRKEIPSSAGGRDGAEPGGREREGTKTEGLREEVPFAC---------ATLLASREDIDRAMRDLDPPEVAPDLPQCYASDLRVPKTYREAVSSQHADLWIHSVEKEFRGLMEA------------------------------------------------DCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMSM 1132

[Close]

BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5JU31_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU31_9PHAE)

HSP 1 Score: 801 bits (2069), Expect = 6.240e-256
Identity = 484/716 (67.60%), Postives = 511/716 (71.37%), Query Frame = -2

Query: 3760 ADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------PAHPPLSQRAVRELGEKET------RVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSASIAPPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAMFATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAG 5871
            ADTGR+ L+NN VW+NRR A PAPVP   XXXXXXXXXXXXXXXXXXXXXXXXXXX                                       XXXXXXXXXXXXXX        A      P+H PL+ RA RELG  +       RVHGRTRGD VRFM+EQQ+PP+P  G  A QHRLGLL+MM KDAL+SSLATREAV QGR + PP        X      S    G+         G  H FAA FATREDV+A LR +RPPDK+PDLPHC+A DLR PKTF EAMRS HSELW DAV                                                                              LACEQNLDLCHFDIQQAFVQS L+EDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASR WH+HLTRCLLLLGF+QCLADACVFR ME+G VIMIIVVHVDDIFAVGQKERCDKFG DLNEMVPVKNLGELRWYSACFY+RD+ERGLLRISQQRFAEELAAEYG+EWG+SVPLPVS+KLTDFDE+EACADVPFRELVGSLMWLATQTRPDIANAVRAVA YCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKA DRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAG
Sbjct:  631 ADTGRLALTNNFVWVNRRAAAPAPVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTYMYTPHAPATTAAPPASPSIFTGSSAPSPISVAPSSXXXXXXXXXXXXXXGLTPPPQPADAASPAPSHSPLTSRAFRELGGSKEWRGAAGRVHGRTRGDGVRFMNEQQRPPAPPDGDAA-QHRLGLLAMMDKDALISSLATREAVGQGRHE-PPMXXXXXXXXSFGDRGSGGAVGAGGPMVSGGGGSQHGFAAKFATREDVDAALRAERPPDKVPDLPHCMAGDLREPKTFNEAMRSPHSELWGDAVD----------------------------------------------------------------------------PLACEQNLDLCHFDIQQAFVQSGLDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVAWYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAG 1268

[Close]

BLAST of Ec-28_002060.2 vs. uniprot
Match: A0A6H5JJQ1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJQ1_9PHAE)

HSP 1 Score: 756 bits (1953), Expect = 2.140e-246
Identity = 443/689 (64.30%), Postives = 476/689 (69.09%), Query Frame = -2

Query: 3520 PLSQRAVRELGEKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSAS------------------------IAPPAXXXXXXTSLAGHGSXXXXXXXXXGGLHMFAAM---FATREDVEATLRGKRPPDKMPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGREFFGLLDAGTFSPV*QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRFMEDGCVIMIIVVHVDDIFAVGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSMKLTDFDEDEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIQIFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVASEFQHADFLTKAISKESFALHRDFVMNLQ 5505
            PLS+RAV+ELG K TRVHGRTRG+ VRF+DEQQQP SP+GGG AL HRLGLL+MM KD L+ SLATREAVD+  R   P+A+                             XXXXXX        XXXXXXXXXGG    A +      REDV+A LR +RPPD MP+LPHCLASDL+VPKT KEAMRSQHSE WDDAVGRE F               E+ INAKWVFNCK        + K +    G    ASIDF ELFAPTVS  SVRLLAALACEQNLDLCHFDIQQAFVQSEL+EDVFMRLPQ CGRLSGLIV+L K LYGLKQASR  HAHLTRCLLL GF+QCL  ACVFR ME+  VIMIIVVHVDDIFA GQKERCDK GRDLNEMVPVKNLGELRWYSACFY+RD+ERGLL+ISQQRFAEELAAEYGVEWG+SVPLPV +KL+D D +EA  DVPFRELVGSLMW                                        TSWMGITFERGVVTG                               CVTWFSRTQKCV LSTTE EYVAIADVLK+VL LRQVWRFMLPDA MPCI +FEDNQGAIQI HNPITNSNS HI V HHFIRELV+RKEISITHV          TKAISKESFALHR+FVMNLQ
Sbjct:  156 PLSKRAVKELGRKHTRVHGRTRGNGVRFVDEQQQPLSPTGGGAALHHRLGLLAMMDKDFLIPSLATREAVDRTPRYTDPAAAGSKSWRPWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGETADVRNDVRHREDVDAALRAERPPDNMPNLPHCLASDLQVPKTLKEAMRSQHSESWDDAVGRELF---------------EDAINAKWVFNCKGRRVRMADEIKGKTCTGGGHAVASIDFEELFAPTVS--SVRLLAALACEQNLDLCHFDIQQAFVQSELDEDVFMRLPQRCGRLSGLIVQLWKRLYGLKQASRHCHAHLTRCLLLFGFLQCLEGACVFRLMEEVHVIMIIVVHVDDIFAAGQKERCDKCGRDLNEMVPVKNLGELRWYSACFYERDVERGLLKISQQRFAEELAAEYGVEWGQSVPLPVGVKLSDLDVNEASGDVPFRELVGSLMW----------------------------------------TSWMGITFERGVVTG-------------------------------CVTWFSRTQKCVKLSTTEVEYVAIADVLKQVLSLRQVWRFMLPDASMPCIPVFEDNQGAIQITHNPITNSNSNHIGVLHHFIRELVDRKEISITHVP---------TKAISKESFALHREFVMNLQ 747

The following BLAST results are available for this feature:

BLAST of Ec-28_002060.2 vs. uniprot

BLAST of Ec-28_002060.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JKY9_9PHAE	0.000e+0	89.82	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JHY5_9PHAE	1.730e-297	65.18	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5KCR3_9PHAE	1.150e-295	72.66	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JEF2_9PHAE	1.030e-285	94.98	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K5Y3_9PHAE	6.800e-277	62.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KGB0_9PHAE	1.030e-275	92.10	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KQB8_9PHAE	8.680e-269	62.37	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K2R1_9PHAE	9.940e-257	62.27	Integrase catalytic domain-containing protein n=3 ...	[more]
A0A6H5JU31_9PHAE	6.240e-256	67.60	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JJQ1_9PHAE	2.140e-246	64.30	Reverse transcriptase Ty1/copia-type domain-contai...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:1862229..1872651 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	6805
Hectar predicted targeting category	other localisation
Gene id	Ec-28_002060.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_002060	Ec-28_002060	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 1856887..1872651 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_002060.2	Ec-28_002060.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 1868096..1870034 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_002060.2.9	Ec-28_002060.2.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1862229..1868126 -
Ec-28_002060.2.8	Ec-28_002060.2.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1868426..1868567 -
Ec-28_002060.2.7	Ec-28_002060.2.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1869216..1869276 -
Ec-28_002060.2.6	Ec-28_002060.2.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1869521..1869655 -
Ec-28_002060.2.5	Ec-28_002060.2.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1869984..1870092 -
Ec-28_002060.2.4	Ec-28_002060.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1870449..1870634 -
Ec-28_002060.2.3	Ec-28_002060.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1870994..1871038 -
Ec-28_002060.2.2	Ec-28_002060.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1872190..1872268 -
Ec-28_002060.2.1	Ec-28_002060.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 1872502..1872651 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_002060	3UTR:Ec-28_002060.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_28 1862229..1868095 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_002060.2	CDS:Ec-28_002060.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 1868096..1868126 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_002060	5UTR:Ec-28_002060.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_28 1870035..1870092 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:1862229..1872651-
coding sequence from alignment at chr_28:1862229..1872651-

mRNA sequence

>Ec-28_002060.2 ID=Ec-28_002060.2|Name=Ec-28_002060.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=140bp
MLVTATSPALETRAFFAAGSSLLACSSTRMSAAPPARASTRNTRAPAVLS
RKTMTTVSAAPLNRFAPTASPASSPTVFAARSVAGSAAVPAVHRVATAPN
PAARAQFWSSGKFAAWHPASSKALRERSHIRTRISDCET*

spliced messenger RNA

>Ec-28_002060.2 ID=Ec-28_002060.2|Name=Ec-28_002060.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6805bp|location=Sequence derived from alignment at chr_28:1862229..1872651- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCCGTTTCGACGTTTCGACCTTCTTCACACATATCGCCCTACGTGT
TTTTTCACGACACAGAGAGCACGCCCCACACGCCCACACGCCACTCTCCC
CCCCTTCGTTTGGAAGACCGCTATACTTCCTACTTTCCGACGACCGACAG
ATACAGCACGATGGTCAAACTTGCGGTTTGCCTTGTCCTCGTCACGGCTA
CCGTGGCACTAGCCGGCGGTTCGTATCAGGGTGAAGGGTTGAGGAATGGT
CAGCAGGGCGCCCGAAACCCCGAGAGAATGAAGAAGGAGAAGAAGGTGGA
AGCCAAGGCATCCACCGATCACGAGTACCTCGGCTGCTACCGCTACAACA
AGGACATTAGTAGCCTCCTGAAGAACGGGAAATCGTTCTACGACAAGACG
GATCAGGCCCTGTGCCGCGCCCACTGCGAAGAGTACGATACAGCCTTCTA
TGCCATGGAGCACGGGGATATCTGCTGGTGCCCTACTTCTCCCGACATCA
ACGACTACATCATAGACGATGTTGGTAACTGCGACAAGCCCTGCACTGGA
GACCCGAGCATTTTTTGCGGCGGGGTCTTCTCTATTAGCATGTTCGAGTA
CCAGGATGTCGGCAGCTCCACCGGCACGGGCGAGTACGAGGAATACGAGA
GCTCCAGCGGTACTGTCCAGGAAGACGATGACGACGGTTTCAGCAGCTCC
ACTGAATCGGTTTGCACCAACGGCGTCTCCGGCATCGAGTCCGACGGTGT
TTGCTGCGAGATCAGTTGCGGGCAGTGCGGCGGTTCCGGCTGTTCATCGC
GTGGCAACGGCGCCCAATCCTGCTGCACGAGCACAATTCTGGAGTTCGGG
GAAGTTTGCGGCGTGGCACCCTGCATCATCTAAGGCGCTGAGGGAACGTT
CTCACATACGTACCAGGATCAGTGACTGCGAGACATGAGGGATATACCAT
GGTATATGAGCGAGCCCAAACGGAACGACCAAGAGGGTCCGCGCTGTTGC
TTGCTAAGGGAAGGCTTGTATTCACAGATGTATCAACATGGACATTTATG
TGTCGACATGTATTATGTGTCGCCTGGAGCAGATTGAACTACAGTACCAG
AACTTCGTCTTTCTGCATATGATAAACGACGTCAGTATCTAGGCTGTTCT
TTGCGGGCATCAGCTGTTGCTGCCGTGGCGGTTTCTAGGCACTAAAATGT
GAAATCTACTCTGGAGATAGTCGCAATATGGGGTTCCAGGGTCCATTGGT
TCTTCCGGATTAGGTCTGGTTAATGCCTGCATGAGGTGAAGGCGGCTCGA
AAATAAGTGATGCCGAAGAAATACGATGGGAGAGGCATGTCTGGGCGTAG
AGTTTTTAGGATATGGCCCTATTTGTTGGGCAGTGCCTTCTGACGTGTCA
TCACTGTGTCGGGCTCTGTGTAGAGAATCCTTGGGTTCCACGGAGGTCGA
TTCAAGTTTGGTCAGCATATGTTGAGGTGTGGTCTGCTGTGCCAATTTTT
GCTGGCGTTTGGATGTTGCTTGATGTGCTGTAGTACATATCGGTCTGGGC
AAGACGTCGGTGTTGGTGTTGACGTTTGAGAATCAGAAAAGCATCTCGTT
TGTTGAAAACCGAGATCGTCATCTTGGGCCGACGAAAACGACCTCTGACT
GCGACAGAGGACTGCCCACCTAAGGTCTAATCCCCTTGCCGGTACCCCTC
ATCCCCATTTGCTCAACTCCTCCAGAAACACTTCCACCGATTCGCCCCCG
CCGCCAACAAAACGATCCCATCAGTTGTGACTCAGGAGCTTTCCTTGCCG
CGCCGGCAGTGAGATTCTGAGGCTGCAACAGTATCCTCCCACCGGACTCT
CCCTGCCCCACGTGATGATTGCTGCTCGACCCAGCAGTTTGGATATCGTC
TCACACATATGGCGTTCGTGATAGTCTTGTTGTCTTGTGCAAACCAGTGA
CAGGAGGCAGGCACAGGTTTGCATGTTTCAGGAAAAGTTACAGTAGGGAG
CGCTGTTAGCTTAGTACTTCTAGTATATGTTTGAATTGGTACAACTATTT
CTGGACATTGCATTGGAGGAAGGATTTGGCACGTGTTCATGATGAGTTAT
GATTGAAGCCCCCGCGCTTTCCGTATGCTCGTTTTCTTTGCCAAGAAGTG
GAAACAAACTTCGTTTTGTTCGAGTATGTTGCGTCAACTATGTGAAGCTG
TCTTCCAATGCCCGTCATTGCTCCGACGCTTGTCTGATGAAGTAGCACAA
ATGCTTGTTGGCTGGTCTTCTGAGGATGAAAAGTTTGTGCTGACTGTTTG
AGATCACATCCCGGGACGAATGCATTGGTTCGTGGATGAACTGATGTGGA
CGCTTCGCGCTGAATTCATAGATAGTAAGTTTTTGTAGGGCATATCCAGT
GGTGTTATTGGTGTTTTGGTATACATATTTGTATAGGTCTGTGGTTGGAT
GATATTTCACAACGGACTTCAATTCAAGGTCGTTTGTCGTATTATCAAGT
AGGGGGGGCTGTTTGGGGTACATGGATCTGGACACAAGACATCCGATCTG
GGAAATACATGTGTTTGGGGGGTATGCTGTTGGGGTCCAAGTGCGGGGCC
TATTGAGACAGAGCACGGACACGTGGGAATTGTTGTCTACCTTGGTTGCT
CTTTACCTACAGTATGTCTGTGTGCTGGAAGGACCACGGTGTGCGGCACT
CAAGGTGTATGTCATCAACATATGTCCTGGGTGAACCTGTTGTCCCAAAA
TTCGAACCCTAAACTCCGCGGGAAGGCGCGGACGGCTACTAGTCCTAATC
GCAACGAAAAGCAAGCGTGCTTGTCGGTGAAAGCCAAGCTGCAATCGACC
CAGCAACCGCCGTTGAGTGCTGTCGGGCGGTGCCTCTTTGATCGATAATT
CGGGTGGCTCAGTTGTGTGTGATGGGAGCGTAGAGCAGCTCGGCCATGAC
GGGCCGCACGGGTAGGTAAAGACGTGTAGACGTGGTGAAAAACGTGTTGT
ATTCATCGGGGGCGTGCTTGAGCTCGTCATTCCATCACGGCATCAAGTCA
CGCATAACGCTTTAATACCCAGAACGAATCTCCATGAATCTCCACCAATC
TACTACACTCCCAAGGAAAACACAAAGAAACTTCTTGTCCCTCCGTAGTT
CGTCACTGCAATCCCCGCATATGTATACGCAATATACCACCCCCATGCTA
TGCTACGAGTATATCGAATAGCCCCCCTGCTCGTATGCATCGTCATGCTC
CAACAAAATATCAAAGTCATCCTTATCATACCAGTTCATCCCAAAACAAA
TCAAAACCAAGACAAAATCGAAAACTCCAACACCAAAACAATACCTCCAA
AAACAATCAATCGCATACCAACTCTTCCAAATCATCAAGAAAAATCCCGA
ACATTAACCTTCCAAAACACTACCATCTCCACTTGACCCTCTCTATCTCT
TGTTCAAACTCGTACATATCCTCTCTCTTCCACTCAACGGCAAAGCACGA
TTTGATCCCAAAACACCTCTGTCACTGCAAATTCATCACAAAGTCTCTGT
GCAACGCAAAAGATTCCTTGCTGATAGCCTTCGTCAAGAAATCTGCATGC
TGAAACTCCGACGCCACATGAGTAATCGAAATCTCCTTCCTCTCTACCAG
TTCCCTGATAAAGTGATGCCGTACATCAATGTGCTTCGAGTTTGAGTTCG
TGATCGGGTTGTGCGCAATCTGAATCGCTCCCTGATTATCCTCGAAGATT
TGAATGCACGGCATACCTGCATCTGGCAACATAAAACGCCAAACTTGCCT
CAAGAAAAGCACCTCCTTCAAGACGTCGGCAATTGCCACATACTCTGCTT
CCGTTGTGGAAAGCGTAACGCACTTCTGCGTCCTCGAAAACCAAGTCACA
CACCCACCCCCACACATCACTAGTCCTCCTGAAACCGACCTACGGTCTGC
TGCCTTGCTCGCATAGTCAGCATCCACGAACACCTGCATGCTCATGCCAG
TCACCACACCCCTCTCAAATGTAATCCCCATCCAACTCGTCCTACGCACG
TACCCTAAAATACCAAGTGCTGCCTTCCAGTGCACCATCTTGGGAGACGC
GCAATACCGCGCTACTGCTCGTACTGCATTCGCGATGTCCGGCCTGGTTT
GAGTGGCCAACCACATCAGGGATCCTACCAACTCGCGGAAAGGGACATCA
GCACACGCTTCGTCCTCGTCAAAGTCGGTGAGCTTCATGCTCACAGGCAA
GGGCACACTCTTCCCCCACTCTACGCCGTACTCTGCAGCCAACTCTTCTG
CAAACCTTTGCTGCGAGATCCTCAAAAGGCCTCTCTCTAGATCTCTCTGG
TAAAAGCACGCGGAGTACCACCTCAACTCCCCAAGGTTCTTCACGGGGAC
CATCTCGTTGAGGTCTCTGCCAAACTTGTCACATCTCTCCTTCTGCCCTA
CGGCAAAAATGTCATCCACGTGGACCACGATGATCATGATCACACATCCA
TCCTCCATAAATCGAAAAACACATGCATCCGCCAAACACTGCACAAATCC
TAAAAGTAACAAACACCTCGTCAGGTGCGCATGCCATTGTCGTGACGCCT
GCTTCAAACCGTACAGACTCTTGCATAGCTTCACGATCAGTCCAGATAAC
CTACCACAACCTTGCGGGAGACGCATGAAAACATCCTCTTCAAGCTCAGA
CTGCACAAACGCCTGCTGAATATCGAAATGACACAAGTCAAGGTTCTGCT
CACATGCCAAAGCTGCCAACAAACGCACACTAGACACGGATACGGTGGGT
GCAAACAATTCTCCAAAATCAATCGAAGCCCTCTGCATGTCCCCCCGCGC
TACAAGTCTTGCCTTGAATTTCGTCGGCCATCCGTACTCGTCTGCCTTAC
AGTTGAATACCCACTTGGCGTTGATGAAGTTTTCTACTGGTTGCTACACC
GGACTAAAAGTACCTGCATCCAACAGACCGAAAAACTCCCGACCGACTGC
ATCATCCCACAACTCTGAATGTTGAGACCGCATGGCCTCCTTGAACGTTT
TCGGCACGCGGAGGTCGCTGGCGAGGCAGTGAGGGAGGTCCGGCATCTTG
TCAGGAGGGCGCTTGCCACGAAGAGTGGCTTCCACGTCCTCGCGGGTGGC
GAACATTGCTGCGAACATGTGCAGGCCCCCCGGCCCTCCAGCTCCTGCGG
CCCCCCCGCTCCCATGGCCTGCTAAACTCGTATCTTGCGGCGGTGGGGGA
GCGGGAGGGGCGATGCTGGCGGACGGTGGCAGGTCTCGACGTCCTTGATC
GACGGCCTCCCGGGTGGCGAGCGACGAGACGAGCGCATCCTTGCCCATCA
TCGACAGCAGCCCAAGGCGGTGTTGGAGAGCGGTGCCGCCACCTGACGGC
GACGGCGGTTGCTGTTGCTCATCCATGAAGCGCACTCGGTCGCCGCGCGT
ACGGCCATGCACTCTGGTTTCCTTCTCGCCCAATTCTCTGACCGCTCGCT
GTGAAAGCGGCGGGTGAGCGGGAGCGGCGGCGCTTGCGGGCGGGGGTGTC
GGCGGTGGACGGGGCGGCGTGGCTGCGGTGGACGGCGGTGCACTCGAAGA
CGCCGTGGAGATCGGCGACGCGGCTCCGGACCCTGTGAAGATCGACGGAG
AAGTGGGCGGCGGCGAAGCGGTGGTCGCTGTGGGCGGGGTGTAGGTGTAC
GTCCGCGATGCCCATGGCGGTGGCGGTGCGGCAGCGGCTGCAGGAACGGC
GGCGGCCGGCGAGGGCGCCGCGGTGACCGAAGAGCCCCCCCCGCTGGCCG
GTACCGGCGCCGGCACGGCGGTGCGGCGGTTGATCCACACGACGTTGTTG
GACAGGCAGATCCTTCCGGTGTCGGCGCTATGCACCCTACGCATCTCCTC
CATGCTCACGCCTTCTTTCCCAACTGGAATTTTTTCTTCAGTCAGTACTA
CGTCACGCACTCCTTCCTGGGCAAACATAGCTACCATGTTCGATCGAAAA
ATCAAAAACTTAGCCTGCTCATCCTCCCCTTGCTTGAAAACACCATCCCA
AGGCGCTAGGCGCTTAGTCTCAGTCATTCGAACCGTCCCTGCGTTAATGG
GTACTCTACCCATGTCCCCTGATGAGACGTGAAGTCGACCGGTGAGGGCG
TCGGCGAGTGTGCGGGCGATTTCGTCGGTCGTCGGGTTGGCCGATGGCCG
CCCCGCGTGTTGCTGGTGGCGATCCTCGTGCTCTCTTCCGGTCCGGACGT
CATCTGTCCTCCGCTCCTCTGCTTCTTGCCTCGACATATCGGCCAGTCTT
GCTTCTACCCTCTGTTCGACCAAGTAGTTGATCCGGGCTTCCTCCTCTGC
TAGTCGGGCGCTCACTCGATCTTGCTCGGTGTCGCTCATCGGTGGCTGCT
GCTGATCGCCGCAAAGCGATACTCCAAACTAAGCTCGACTCGAATCTCGT
AGACGACGTGTCATACGCTAGCGTGATCGATAATTCGGGTGGCTCAGTTG
TGTGTGATGGGAGCGTAGAGCAGCTCGGCCATGACGGGCCGCACGGGTAG
GTAAAGACGTGTAGACGTGGTGAAAAACGTGTTGTATTCATCGGGGGCGT
GCTTGAGCTCGTCATTCCATCACGGCATCAAGTCACGCATAACGCTTTAA
TACCCAGAACGAATCTCCATGAATCTCCACCAATCTACTACACTCCCAAG
GAAAACACAAAGAAACTTCTTGTCCCTCCGTAGTTCGTCACTGCAATCCC
CGCATATGTATACGCAATATACCACCCCCATGCTATGCTACGAGTATATC
GAATA

protein sequence of Ec-28_002060.2

>Ec-28_002060.2 ID=Ec-28_002060.2|Name=Ec-28_002060.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=140bp
MLVTATSPALETRAFFAAGSSLLACSSTRMSAAPPARASTRNTRAPAVLS
RKTMTTVSAAPLNRFAPTASPASSPTVFAARSVAGSAAVPAVHRVATAPN
PAARAQFWSSGKFAAWHPASSKALRERSHIRTRISDCET*

mRNA from alignment at chr_28:1862229..1872651-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_002060.2 ID=Ec-28_002060.2|Name=Ec-28_002060.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10423bp|location=Sequence derived from alignment at chr_28:1862229..1872651- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCCGTTTCGACGTTTCGACCTTCTTCACACATATCGCCCTACGTGT
TTTTTCACGACACAGAGAGCACGCCCCACACGCCCACACGCCACTCTCCC
CCCCTTCGTTTGGAAGACCGCTATACTTCCTACTTTCCGACGACCGACAG
GTAAGAGCGTGATACGTCTTGCGGGCAGGTAGAGGCCAAACAGTCGACTA
CACCCTACATACATAGGCATCATTCGTCTCTCCACACCGTACTCTCACTG
TTCTCAAGAAACCGACGTCGTCGATCTGATATGACCCCATGTTATAGCTC
TAGTAGTTGTGCCATTCCGTTCTTTATGCCCTGCCCGGCGTTGCGGACGT
GTGCTGTGGTCGTGTGCTGAATTGATTTTTCAGATACAGCACGATGGTCA
AACTTGCGGTTTGCCTTGTCCTCGTCACGGCTACCGTGGCACTAGCCGGC
GGTTCGTATCAGGTGCGTACGATTTCCTTTTGGGGGAGAGGCTGCATAGA
CTGCTGTAAAGAATAGCGCTTCATCTCTTTGCCCTCTCCTATGTAGCGCG
ATTTTGTGGCTGGATTTTGTACACTCACAACAGGTAAGATGCAACGAATA
TTTGTCCACCGCAGCAATTAAATGCGATAGTCTCTCGCGGTACTGAGGTT
CTCAATTGCCTTGATGGCGGCCACCGCCCCTACTTCGCATTAGGGCATAG
GCGCGTGACGGGCGGGAGAATGTTCGACCAACCAAAAAAATGCGCCGCAG
CAGGGCTGTGTGAGGAGATCGGGCCCGGCTCGTGCCCTTTCAGTAGGCGG
GAAACAAAAGTGCTTTCCAGAAAACGCTCTTCTTGAATGCTTGGGCGAGA
ACCATGCTTAGCCACCCACAACATTATCTAAACTAACCCTTCGCTGTATG
TGGTCTGTATCGTGGTGAGCGTAGTTGTTGATAGTTTCGGCTGGCCAAAT
GTCGCATATCCGGGAAACTTCGAGCGAGGGAGAGATTCAACCGGCCCATG
AATTTGTTCGATCTGTAAGGTTGTACCATAAATACATATAGGGCGTACAC
CTGAGGGATTCGAGGAACGTGTTTGATATTTTCCGATGGGCTTCATTTCG
TGTTCATACAGCAGACCCTTGGATGACAAAGGATGCTAGTTTGCAGTATG
CACATCCCAAGTGTGTAGGACGATCCCCATGTAGCTGAAGATTTGTCCAG
AAAACCCGAACAATAATACAATATGCTTTTAATCTGGGTCCTAGGCTTTC
CTCGAGCTGAATTATCCGTATCGAATTTCAAGGCTGTTGCTGTTCCAGCC
CACTCAACAACTTGATGTGAAGGCACCCACAGGACGATAATCGACTGCGT
TCACAACGAACGAGAGGAATTAGTCACACTCGTTTTTGATCCAGATCCCG
CCCAGTCCTTACCCTCTCCTTCCACCACTCACTCCTCTTGACATCATGTT
GTCATGACAAAAAACGGCGGGCGCTACATGTATTCAATGTTCCATTTGAG
TATCAGTTGCTTGTTTCATGCGCTCATGTTCACATCGCTTCGGCCTCTGT
GACTCTCCGCCTGTTTTTCCCGGATCGCTCCATTCACACTCGTTTGCTTC
TTTTCTTGTGCAGGGTGAAGGGTTGAGGAATGGTCAGCAGGGCGCCCGAA
ACCCCGAGGTACGATTAGTTTGACACCCAAGAAAAACGAGTACACAAACT
CAAAGTACAGACACCTGTATCTGGTTACATACATCTATCTACAGCAGTAG
TAATGTTCTACCAAAGGGGAGACTTAGGAGCGCATCACAATACTCATAAA
TACCATTTTTTGTAGTGCCAGGTGTCACCACGGATGGTATGTGGGCCACG
ACAACATGCGATTGCTGCACTAAAGTAACAAACTGCTATTTGCATGACTA
TTTGCTGTAAACGTGTTTCGCTTCTCTCTCCGATGTACGCATATCTATGT
ATATGAATGATTGTATTGTTTTGGCGAACTCCCTCGCTTGCGTTCGTTTG
GGGCGTCGTGTCTACAGAGAATGAAGAAGGAGAAGAAGGTGGAAGCCAAG
GCATCCACCGATCACGAGTACCTCGGCTGCTACCGCTACAACAAGGACAT
TAGTAGCCTCCTGAAGAACGGGAAATCGTTCTACGACAAGACGGATCAGG
CCCTGTGCCGCGCCCACTGCGAAGAGTACGATACAGCCTTCTATGCCATG
GAGGTATGAGTTTGAAGTGTAACGCCTTCGGCCATGTCCTGTTTGGATGG
GAGTGGTAGATTGAATCACAACCACCAATATGGTGCCAATACGTTGTTTG
ATATTGCACGGACCGAAGCACCCGTGATCTCAGACCACATCCCTACACAC
AGATTTGAAGCAGGGCACTCAGGACGTACGCCATAAACATCGTCCCTTGA
TATCGACTGCACAAACGGAACAACTTGGCCACCAGTGGTTAATGCTGACA
ATATGGATCCATACGCGACGGATTGATTCTTAAAGACTCTCATTTCCCCC
GCTATTGAGTTCATCGTCTTATCGTACTCCCCCCCACTTTTCATATTCCA
ACAAAACAGCACGGGGATATCTGCTGGTGCCCTACTTCTCCCGACATCAA
CGACTACATCATAGACGATGTTGGTAACTGCGACAAGCCCTGCACTGGAG
ACCCGAGCATTTTTTGCGGTGAGTCCAAATGAAGGGCAAGCGACATATGA
GGTTGTTTGATGGTGCAAGGTGGAAGGGAATATGTGAAGGCGGAGAAAGG
GGGTATCAACACAACTAAGAGAGGCAATGAGAAAGCATTAGCCACCCAGG
CTGTCCGTCACCGCGCCTTCTACGCCCTCCTAACACGTACCCGGGCACTT
GTAGCATATCACGAACTGTTGAGCCGCTGACCCATCCAGCCGACCATTGG
TTAGGATACCGCCCTTGTTTACGTTAGGATACCGCATACATACGCTTACC
CTCCTACCCTTGTCGCTTTTCACCATCATCACCCCCCTTACTCCAGGCGG
GGTCTTCTCTATTAGCATGTTCGAGTACCAGGATGTCGGCAGCTCCACCG
GCACGGGCGAGTACGAGGAATACGAGAGCTCCAGCGGTACTGTCCAGGAA
GACGATGACGACGGTTTCAGCAGCTCCACTGGTGTGTAAACGTGATTTTG
ACACCGGGCTTTACAGCATAAAGTGTCTATTTCGCCCCCTTGAAATGTAT
CGTTTGGAAATATTTCGTGTGTCGTATATGACCTTGGTTCCCTCATTGTC
ATTTGGTTTTTCTTGTATGGCCCCCACGACTCATATGATTCGCTTTCGTA
CGCCCCCAGCGCCTCGATTTCATTGTACTCGATGAACACCGTGCTATCTT
TGTTCACGTGATCGTTGTTGCACAGAATCGGTTTGCACCAACGGCGTCTC
CGGCATCGAGTCCGACGGTGTTTGCTGCGAGATCAGGTACGTCGAAACAG
TCATGCGTAGCCCACTCGCCATTCGGCAGTTGGGATAGCGTTACTTCACG
AGGTCGCTAGCGTATTTTGGTTGCGATTTATATATCATCGTACCATGGTA
TATGAATGACAGCGGGTAGCCTCGCGTGCCGACCACTCTCGGACCCGAAC
TCTCTTCCCCCCTTACCTCAACTTAGGTCATGTCTCAATCTAGGTGCCTC
GTTGGACGTGCCGCCACTATTCATATGTGGGGTCTTATCTCAGCCCGAGA
TGGATGGCATATATATATCGTCTCTTGACACTAGAGAAGAAAGCATGGCT
CCCCGTGAAATGCGCCATCCCCGCAGCCAGGCACTCGTTAGGTCATGAAT
GCGTGTTCAGGTCTTGCCGCGATAGTGCACATTAGGCAATGGTACAACAG
CAACGTAGACGATCGCGTGTGCAGGGAGCGCGTGCGCTCCACGACGAGCG
TGCCTATCACTCAAATCCCTTTCTCCCAACTCACCACCCCTATCCCATGC
GGTTTTCGAAATTTCGGGCACCTGATGAAGACTTCGAGGGCCTGCAAACG
CTTAATGGTTCGCGACCACATGTGGATGTTTTCATAACCATAAGAACAAA
CCTCGTTGTTTGGGTGCATTTGGTCTCGACGCAGTTGCGGGCAGTGCGGC
GGTTCCGGCTGTTCATCGCGTGGCAACGGCGCCCAATCCTGCTGCACGAG
CACAATTCTGGAGTTCGGGGAAGTTTGCGGCGTGGCACCCTGCATCATCT
AAGGCGCTGAGGGAACGTTCTCACATGTATGCACCAACGTTGAAGCCGGT
TTCCCGTTTCTTAGGGTGGTGTTTGGTTCTCTAACGTCGTTGATAGTTGC
TGTCATCGATTTGGATCAGTCTATGTCATTGGCCTCAACATCCGACAACG
ACATTGTCGTCTCCGGTTTCATTTCATTTCGCTTTCTACGGCCCCGAGAC
GAAGGGCAATGCCGGAGTTACTGTCAGAGAAACACACGGACCAGCGCTTG
AACGGCCGTGCAATTCCTGAAACACTCCTCGTTCTGCCCCATTGTTTTGG
TTGTTTCGCGTCTGTACCTGTCCAGACGTACCAGGATCAGTGACTGCGAG
ACATGAGGGATATACCATGGTATATGAGCGAGCCCAAACGGAACGACCAA
GAGGGTCCGCGCTGTTGCTTGCTAAGGGAAGGCTTGTATTCACAGATGTA
TCAACATGGACATTTATGTGTCGACATGTATTATGTGTCGCCTGGAGCAG
ATTGAACTACAGTACCAGAACTTCGTCTTTCTGCATATGATAAACGACGT
CAGTATCTAGGCTGTTCTTTGCGGGCATCAGCTGTTGCTGCCGTGGCGGT
TTCTAGGCACTAAAATGTGAAATCTACTCTGGAGATAGTCGCAATATGGG
GTTCCAGGGTCCATTGGTTCTTCCGGATTAGGTCTGGTTAATGCCTGCAT
GAGGTGAAGGCGGCTCGAAAATAAGTGATGCCGAAGAAATACGATGGGAG
AGGCATGTCTGGGCGTAGAGTTTTTAGGATATGGCCCTATTTGTTGGGCA
GTGCCTTCTGACGTGTCATCACTGTGTCGGGCTCTGTGTAGAGAATCCTT
GGGTTCCACGGAGGTCGATTCAAGTTTGGTCAGCATATGTTGAGGTGTGG
TCTGCTGTGCCAATTTTTGCTGGCGTTTGGATGTTGCTTGATGTGCTGTA
GTACATATCGGTCTGGGCAAGACGTCGGTGTTGGTGTTGACGTTTGAGAA
TCAGAAAAGCATCTCGTTTGTTGAAAACCGAGATCGTCATCTTGGGCCGA
CGAAAACGACCTCTGACTGCGACAGAGGACTGCCCACCTAAGGTCTAATC
CCCTTGCCGGTACCCCTCATCCCCATTTGCTCAACTCCTCCAGAAACACT
TCCACCGATTCGCCCCCGCCGCCAACAAAACGATCCCATCAGTTGTGACT
CAGGAGCTTTCCTTGCCGCGCCGGCAGTGAGATTCTGAGGCTGCAACAGT
ATCCTCCCACCGGACTCTCCCTGCCCCACGTGATGATTGCTGCTCGACCC
AGCAGTTTGGATATCGTCTCACACATATGGCGTTCGTGATAGTCTTGTTG
TCTTGTGCAAACCAGTGACAGGAGGCAGGCACAGGTTTGCATGTTTCAGG
AAAAGTTACAGTAGGGAGCGCTGTTAGCTTAGTACTTCTAGTATATGTTT
GAATTGGTACAACTATTTCTGGACATTGCATTGGAGGAAGGATTTGGCAC
GTGTTCATGATGAGTTATGATTGAAGCCCCCGCGCTTTCCGTATGCTCGT
TTTCTTTGCCAAGAAGTGGAAACAAACTTCGTTTTGTTCGAGTATGTTGC
GTCAACTATGTGAAGCTGTCTTCCAATGCCCGTCATTGCTCCGACGCTTG
TCTGATGAAGTAGCACAAATGCTTGTTGGCTGGTCTTCTGAGGATGAAAA
GTTTGTGCTGACTGTTTGAGATCACATCCCGGGACGAATGCATTGGTTCG
TGGATGAACTGATGTGGACGCTTCGCGCTGAATTCATAGATAGTAAGTTT
TTGTAGGGCATATCCAGTGGTGTTATTGGTGTTTTGGTATACATATTTGT
ATAGGTCTGTGGTTGGATGATATTTCACAACGGACTTCAATTCAAGGTCG
TTTGTCGTATTATCAAGTAGGGGGGGCTGTTTGGGGTACATGGATCTGGA
CACAAGACATCCGATCTGGGAAATACATGTGTTTGGGGGGTATGCTGTTG
GGGTCCAAGTGCGGGGCCTATTGAGACAGAGCACGGACACGTGGGAATTG
TTGTCTACCTTGGTTGCTCTTTACCTACAGTATGTCTGTGTGCTGGAAGG
ACCACGGTGTGCGGCACTCAAGGTGTATGTCATCAACATATGTCCTGGGT
GAACCTGTTGTCCCAAAATTCGAACCCTAAACTCCGCGGGAAGGCGCGGA
CGGCTACTAGTCCTAATCGCAACGAAAAGCAAGCGTGCTTGTCGGTGAAA
GCCAAGCTGCAATCGACCCAGCAACCGCCGTTGAGTGCTGTCGGGCGGTG
CCTCTTTGATCGATAATTCGGGTGGCTCAGTTGTGTGTGATGGGAGCGTA
GAGCAGCTCGGCCATGACGGGCCGCACGGGTAGGTAAAGACGTGTAGACG
TGGTGAAAAACGTGTTGTATTCATCGGGGGCGTGCTTGAGCTCGTCATTC
CATCACGGCATCAAGTCACGCATAACGCTTTAATACCCAGAACGAATCTC
CATGAATCTCCACCAATCTACTACACTCCCAAGGAAAACACAAAGAAACT
TCTTGTCCCTCCGTAGTTCGTCACTGCAATCCCCGCATATGTATACGCAA
TATACCACCCCCATGCTATGCTACGAGTATATCGAATAGCCCCCCTGCTC
GTATGCATCGTCATGCTCCAACAAAATATCAAAGTCATCCTTATCATACC
AGTTCATCCCAAAACAAATCAAAACCAAGACAAAATCGAAAACTCCAACA
CCAAAACAATACCTCCAAAAACAATCAATCGCATACCAACTCTTCCAAAT
CATCAAGAAAAATCCCGAACATTAACCTTCCAAAACACTACCATCTCCAC
TTGACCCTCTCTATCTCTTGTTCAAACTCGTACATATCCTCTCTCTTCCA
CTCAACGGCAAAGCACGATTTGATCCCAAAACACCTCTGTCACTGCAAAT
TCATCACAAAGTCTCTGTGCAACGCAAAAGATTCCTTGCTGATAGCCTTC
GTCAAGAAATCTGCATGCTGAAACTCCGACGCCACATGAGTAATCGAAAT
CTCCTTCCTCTCTACCAGTTCCCTGATAAAGTGATGCCGTACATCAATGT
GCTTCGAGTTTGAGTTCGTGATCGGGTTGTGCGCAATCTGAATCGCTCCC
TGATTATCCTCGAAGATTTGAATGCACGGCATACCTGCATCTGGCAACAT
AAAACGCCAAACTTGCCTCAAGAAAAGCACCTCCTTCAAGACGTCGGCAA
TTGCCACATACTCTGCTTCCGTTGTGGAAAGCGTAACGCACTTCTGCGTC
CTCGAAAACCAAGTCACACACCCACCCCCACACATCACTAGTCCTCCTGA
AACCGACCTACGGTCTGCTGCCTTGCTCGCATAGTCAGCATCCACGAACA
CCTGCATGCTCATGCCAGTCACCACACCCCTCTCAAATGTAATCCCCATC
CAACTCGTCCTACGCACGTACCCTAAAATACCAAGTGCTGCCTTCCAGTG
CACCATCTTGGGAGACGCGCAATACCGCGCTACTGCTCGTACTGCATTCG
CGATGTCCGGCCTGGTTTGAGTGGCCAACCACATCAGGGATCCTACCAAC
TCGCGGAAAGGGACATCAGCACACGCTTCGTCCTCGTCAAAGTCGGTGAG
CTTCATGCTCACAGGCAAGGGCACACTCTTCCCCCACTCTACGCCGTACT
CTGCAGCCAACTCTTCTGCAAACCTTTGCTGCGAGATCCTCAAAAGGCCT
CTCTCTAGATCTCTCTGGTAAAAGCACGCGGAGTACCACCTCAACTCCCC
AAGGTTCTTCACGGGGACCATCTCGTTGAGGTCTCTGCCAAACTTGTCAC
ATCTCTCCTTCTGCCCTACGGCAAAAATGTCATCCACGTGGACCACGATG
ATCATGATCACACATCCATCCTCCATAAATCGAAAAACACATGCATCCGC
CAAACACTGCACAAATCCTAAAAGTAACAAACACCTCGTCAGGTGCGCAT
GCCATTGTCGTGACGCCTGCTTCAAACCGTACAGACTCTTGCATAGCTTC
ACGATCAGTCCAGATAACCTACCACAACCTTGCGGGAGACGCATGAAAAC
ATCCTCTTCAAGCTCAGACTGCACAAACGCCTGCTGAATATCGAAATGAC
ACAAGTCAAGGTTCTGCTCACATGCCAAAGCTGCCAACAAACGCACACTA
GACACGGATACGGTGGGTGCAAACAATTCTCCAAAATCAATCGAAGCCCT
CTGCATGTCCCCCCGCGCTACAAGTCTTGCCTTGAATTTCGTCGGCCATC
CGTACTCGTCTGCCTTACAGTTGAATACCCACTTGGCGTTGATGAAGTTT
TCTACTGGTTGCTACACCGGACTAAAAGTACCTGCATCCAACAGACCGAA
AAACTCCCGACCGACTGCATCATCCCACAACTCTGAATGTTGAGACCGCA
TGGCCTCCTTGAACGTTTTCGGCACGCGGAGGTCGCTGGCGAGGCAGTGA
GGGAGGTCCGGCATCTTGTCAGGAGGGCGCTTGCCACGAAGAGTGGCTTC
CACGTCCTCGCGGGTGGCGAACATTGCTGCGAACATGTGCAGGCCCCCCG
GCCCTCCAGCTCCTGCGGCCCCCCCGCTCCCATGGCCTGCTAAACTCGTA
TCTTGCGGCGGTGGGGGAGCGGGAGGGGCGATGCTGGCGGACGGTGGCAG
GTCTCGACGTCCTTGATCGACGGCCTCCCGGGTGGCGAGCGACGAGACGA
GCGCATCCTTGCCCATCATCGACAGCAGCCCAAGGCGGTGTTGGAGAGCG
GTGCCGCCACCTGACGGCGACGGCGGTTGCTGTTGCTCATCCATGAAGCG
CACTCGGTCGCCGCGCGTACGGCCATGCACTCTGGTTTCCTTCTCGCCCA
ATTCTCTGACCGCTCGCTGTGAAAGCGGCGGGTGAGCGGGAGCGGCGGCG
CTTGCGGGCGGGGGTGTCGGCGGTGGACGGGGCGGCGTGGCTGCGGTGGA
CGGCGGTGCACTCGAAGACGCCGTGGAGATCGGCGACGCGGCTCCGGACC
CTGTGAAGATCGACGGAGAAGTGGGCGGCGGCGAAGCGGTGGTCGCTGTG
GGCGGGGTGTAGGTGTACGTCCGCGATGCCCATGGCGGTGGCGGTGCGGC
AGCGGCTGCAGGAACGGCGGCGGCCGGCGAGGGCGCCGCGGTGACCGAAG
AGCCCCCCCCGCTGGCCGGTACCGGCGCCGGCACGGCGGTGCGGCGGTTG
ATCCACACGACGTTGTTGGACAGGCAGATCCTTCCGGTGTCGGCGCTATG
CACCCTACGCATCTCCTCCATGCTCACGCCTTCTTTCCCAACTGGAATTT
TTTCTTCAGTCAGTACTACGTCACGCACTCCTTCCTGGGCAAACATAGCT
ACCATGTTCGATCGAAAAATCAAAAACTTAGCCTGCTCATCCTCCCCTTG
CTTGAAAACACCATCCCAAGGCGCTAGGCGCTTAGTCTCAGTCATTCGAA
CCGTCCCTGCGTTAATGGGTACTCTACCCATGTCCCCTGATGAGACGTGA
AGTCGACCGGTGAGGGCGTCGGCGAGTGTGCGGGCGATTTCGTCGGTCGT
CGGGTTGGCCGATGGCCGCCCCGCGTGTTGCTGGTGGCGATCCTCGTGCT
CTCTTCCGGTCCGGACGTCATCTGTCCTCCGCTCCTCTGCTTCTTGCCTC
GACATATCGGCCAGTCTTGCTTCTACCCTCTGTTCGACCAAGTAGTTGAT
CCGGGCTTCCTCCTCTGCTAGTCGGGCGCTCACTCGATCTTGCTCGGTGT
CGCTCATCGGTGGCTGCTGCTGATCGCCGCAAAGCGATACTCCAAACTAA
GCTCGACTCGAATCTCGTAGACGACGTGTCATACGCTAGCGTGATCGATA
ATTCGGGTGGCTCAGTTGTGTGTGATGGGAGCGTAGAGCAGCTCGGCCAT
GACGGGCCGCACGGGTAGGTAAAGACGTGTAGACGTGGTGAAAAACGTGT
TGTATTCATCGGGGGCGTGCTTGAGCTCGTCATTCCATCACGGCATCAAG
TCACGCATAACGCTTTAATACCCAGAACGAATCTCCATGAATCTCCACCA
ATCTACTACACTCCCAAGGAAAACACAAAGAAACTTCTTGTCCCTCCGTA
GTTCGTCACTGCAATCCCCGCATATGTATACGCAATATACCACCCCCATG
CTATGCTACGAGTATATCGAATA

Coding sequence (CDS) from alignment at chr_28:1862229..1872651-

>Ec-28_002060.2 ID=Ec-28_002060.2|Name=Ec-28_002060.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=420bp|location=Sequence derived from alignment at chr_28:1862229..1872651- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTGGTAACTGCGACAAGCCCTGCACTGGAGACCCGAGCATTTTTTGC
GGCGGGGTCTTCTCTATTAGCATGTTCGAGTACCAGGATGTCGGCAGCTC
CACCGGCACGGGCGAGTACGAGGAATACGAGAGCTCCAGCGGTACTGTCC
AGGAAGACGATGACGACGGTTTCAGCAGCTCCACTGAATCGGTTTGCACC
AACGGCGTCTCCGGCATCGAGTCCGACGGTGTTTGCTGCGAGATCAGTTG
CGGGCAGTGCGGCGGTTCCGGCTGTTCATCGCGTGGCAACGGCGCCCAAT
CCTGCTGCACGAGCACAATTCTGGAGTTCGGGGAAGTTTGCGGCGTGGCA
CCCTGCATCATCTAAGGCGCTGAGGGAACGTTCTCACATACGTACCAGGA
TCAGTGACTGCGAGACATGA

Synonyms

The feature 'Ec-28_002060.2' has the following synonyms


Synonym
Esi0033_0074
Esi_0033_0074