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Homology
BLAST of Ec-28_001580.1 vs. uniprot
Match: D7FXP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXP8_ECTSI) HSP 1 Score: 955 bits (2468), Expect = 0.000e+0 Identity = 836/836 (100.00%), Postives = 836/836 (100.00%), Query Frame = 1
Query: 1 MASTTXXXXXXXXXXXXXXXXXPKALEPGAKNNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSGILPLPEESXXXXXXXXXXDGEYDGEYVEAGARLRAARGPEPAVAGWVAAGIASGAISSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKQSRGSVEKDSGEVADAEAPAATRAGVEAGADAEAGAVTPGKKSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVSADGVAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSLEAVASPTPLPGNTASEEVSAPSSGSFQTPPKNXXXXXXXXXXXXXXXXXXPAAGESARKTVTFGANMAKEHQKSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF 2508
MASTTXXXXXXXXXXXXXXXXXPKALEPGAKNNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSGILPLPEESXXXXXXXXXXDGEYDGEYVEAGARLRAARGPEPAVAGWVAAGIASGAISSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKQSRGSVEKDSGEVADAEAPAATRAGVEAGADAEAGAVTPGKKSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVSADGVAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSLEAVASPTPLPGNTASEEVSAPSSGSFQTPPKNXXXXXXXXXXXXXXXXXXPAAGESARKTVTFGANMAKEHQKSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF
Sbjct: 1 MASTTXXXXXXXXXXXXXXXXXPKALEPGAKNNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSGILPLPEESXXXXXXXXXXDGEYDGEYVEAGARLRAARGPEPAVAGWVAAGIASGAISSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKQSRGSVEKDSGEVADAEAPAATRAGVEAGADAEAGAVTPGKKSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVSADGVAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSLEAVASPTPLPGNTASEEVSAPSSGSFQTPPKNXXXXXXXXXXXXXXXXXXPAAGESARKTVTFGANMAKEHQKSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF 836
BLAST of Ec-28_001580.1 vs. uniprot
Match: A0A836CJU2_9STRA (Nucleolar protein,Nop52-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU2_9STRA) HSP 1 Score: 194 bits (493), Expect = 5.640e-48 Identity = 120/318 (37.74%), Postives = 174/318 (54.72%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSR--------GGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAA------EPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKK-----VFAAVELDRVQACLFEVAAAPQTRDKRRVKLYEL 990
+NEV+FG++L DKRVRD TV ALR WL++RSR G L+DLDL KIW+GLWYCM+MCDKA VQ+ELA L+ + LF DD +G+RF +F + M+R W R+D R+DK+Y+L+R F RE L +C PA + A++ + A + +D+ L+ A ++ E L P G R+H+ D++ E A G + TE + L PWL + A + RR + +F+ LL + K G +E EE F AVE +Q LF++A+ TR++ R +LY+L
Sbjct: 46 SNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAAD----------------ADDDDDEAPSI-YFDMQLVQAFMGIIRDECLL--HLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLL-TYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKL 343
BLAST of Ec-28_001580.1 vs. uniprot
Match: A0A225WWZ0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWZ0_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.160e-39 Identity = 108/308 (35.06%), Postives = 162/308 (52.60%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEE-----EKKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRY 1002
N +FG+HLA ++K+ RDR + L +L ++ TDL+ K+W+ L+YCM+M DK PVQ EL+ NLAGL+ + F SF TM R+W +D LR+DK+Y+LVR FVRE +A + WD L+ ++ EV++ P GLR+HLADV+ E NA G D+ TEAF++ L P+ + + E + VF+R E VF+ +L + +EEEE E KVF VE+ +VQ +F +A+A T ++ R LY L++++
Sbjct: 3 NAASRFGQHLAHTEKKYRDRALKKLTVYLTKKQ---EWTDLEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRVPTSTG-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQD---------------------------------WDEDLVQEFVTILSAEVVS--QLPNGLRMHLADVYLTEIYNAAGQDVTTEAFIILLEPFFTLLSS-EYDKTVFKRVRELVFDDMLTKYKFGPQSEQEEEETDAEEEDKVFEQVEVAQVQHRIFAIASADDTAERNRSALYTLYKKF 270
BLAST of Ec-28_001580.1 vs. uniprot
Match: A0A2P4Y0J0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0J0_9STRA) HSP 1 Score: 161 bits (408), Expect = 6.140e-38 Identity = 109/319 (34.17%), Postives = 166/319 (52.04%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEK----------KVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGV 1020
N +FG+HLA ++K+ RDR + L +L ++ TDL+ K+W+ L+YCM+M DK PVQ EL+ NLAGL+ D + F SF TM R+W +D LR+DK+Y+LVR FVRE +A + WD L+ ++ EV++ P GLR+HLAD++ E NA G D+ TEAF+ L P+ + + E + VF+R E VF+ +L + K G + E++E+ KVF VE+ +VQ +F +A+A T ++ R LY L++++ T V
Sbjct: 3 NAASRFGQHLAHTEKKYRDRALKKLTVYLTKKK---EWTDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAGLVHRIPDSTL-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQD---------------------------------WDEELVQEFVTILSAEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLLEPFFTLLSS-EYDKTVFKRVRELVFDDMLTKY---KFGSQPEKDEEXXXXXXXXXNKVFEQVEVVQVQHRIFAIASADDTAERNRSALYTLYKKFFSVTQV 278
BLAST of Ec-28_001580.1 vs. uniprot
Match: A0A3M6V8T8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8T8_9STRA) HSP 1 Score: 158 bits (399), Expect = 9.930e-37 Identity = 107/316 (33.86%), Postives = 165/316 (52.22%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLF---PEDKDGMEEEEEEK----------KVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRY 1002
N +FG+HLA ++K+ RDR + L +L ++ T+L+ K+W+ L+YCM+M DK PVQ EL+ NLA L+ + + F +SF TMQR+W +D LR+DK+Y+LVR FVREA+A + W+ L+ ++D++ EV++ P G R+HLAD++ E NA G D+ +EAF+ L P+ + E + VF+R E VF+ +L + P+ K G EEE KVF VEL VQ +F +A+A T ++ R LY L++++
Sbjct: 3 NAASRFGQHLAHTEKKYRDRALKKLTVYLTKKK---EWTNLEWDKLWKALFYCMWMSDKRPVQEELSSNLAALVHHIPSTES-ALAFVRSFFRTMQREWHGLDGLRLDKFYSLVRKFVREAVALLRVQD---------------------------------WNETLVQELADILSTEVVS--QLPNGPRMHLADLYLTEIYNAAGKDIVSEAFVTLLEPFF-ILLNSEYDKTVFKRVRELVFDEMLSKYKFGPQTKTGEEEEXXXXXXXXXXXXXHKVFEKVELALVQHRIFAIASADATIERNRSALYTLYKKF 278
BLAST of Ec-28_001580.1 vs. uniprot
Match: H3GJI2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJI2_PHYRM) HSP 1 Score: 154 bits (390), Expect = 1.240e-35 Identity = 105/316 (33.23%), Postives = 164/316 (51.90%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEK-------------KVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRY 1002
N +FG+HLA ++K+ RDR + L +L ++ TDL+ K+W+ L+YCM+M DK PVQ EL+ NLA L+ + A + F SF TM R+W +D LR+DK+Y+LVR FVRE++A + WD ++ ++ EV++ P GLR+HLAD++ E NA G D+ TEAF+ L P+ + + E + VF+R E VFE +L + K G + E+E+ KVF V++ +VQ +F +A+A T ++ R LY L++++
Sbjct: 3 NAASRFGQHLAHTEKKYRDRALKKLTVYLTKKK---DWTDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAALVHKVPEPEA-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRESVALLRVQD---------------------------------WDEEIVQEFVTILSSEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFVTLLEPFFTLLSG-EYDKTVFKRVKELVFEDMLTKY---KFGPQPEKEDXXXXXXXXXXXXXDKVFELVDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 275
BLAST of Ec-28_001580.1 vs. uniprot
Match: A0A6A3MMN9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MMN9_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.710e-35 Identity = 110/338 (32.54%), Postives = 170/338 (50.30%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEE----------------EKKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSGILP 1059
N +FG+HLA ++K+ RDR + L +L +++ T+L+ K+W+ L+YCM+M DK PVQ EL+ NLA L+ A ++F SF TM R+W +D LR+DK+Y+LVR FVRE +A + WD LL V+ EV++ P GLR+HLAD++ E NA G D+ T+AF+ + P+ + + E + +VF+R E VFE +L + K G + E+E E KVF V++ +VQ +F +A+A T ++ R LY L++++ T V A + P
Sbjct: 35 NAASRFGQHLAHTEKKYRDRALKKLTVYLTKKT---EWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAALVHKVPSCEA-ALQFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQD---------------------------------WDEDLLQTFVSVLSAEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTDAFVTLMEPFFTLLSG-EYDKIVFKRVRELVFEDMLTKY---KLGPQPEKESXXXXXXXXXXXXXXEEDKVFEQVDVAQVQHRIFAIASADDTAERNRSALYTLYKKFFTVTHVDSFQAAQEEAVNP 329
BLAST of Ec-28_001580.1 vs. uniprot
Match: G4YJ53_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJ53_PHYSP) HSP 1 Score: 154 bits (389), Expect = 1.960e-35 Identity = 107/319 (33.54%), Postives = 165/319 (51.72%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEK----------------KVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRY 1002
N +FG+HLA ++K+ RDR + L +L +++ DL+ K+W+ L+YCM+M DK PVQ EL+ NLA L+ A + F SF TM R+W +D LR+DK+Y+LVR FVRE +A + +E WD LL ++ EV++ P GLR+HLAD++ E NA G D+ TEAF+ + P+ + + E + VF+R E VFE +L F K G + E+E++ KVF V++ +VQ +F +A+A T ++ R LY L++++
Sbjct: 3 NAASRFGQHLAHTEKKFRDRALKKLTVYLAKKT---DWNDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAALVHKVPTAEA-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRV-----------------------QE----------WDEDLLQTFVTILSEEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLMEPFFTLLSG-EYDKTVFKRVRELVFEDMLTKF---KFGPQPEKEQEDXXXXXXXXXXXXXXXKVFEQVDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 278
BLAST of Ec-28_001580.1 vs. uniprot
Match: D0NGX9_PHYIT (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NGX9_PHYIT) HSP 1 Score: 150 bits (380), Expect = 7.810e-35 Identity = 104/317 (32.81%), Postives = 163/317 (51.42%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEK--------------KVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRY 1002
N +FG+HLA ++K+ RDR + L +L +++ T+L+ K+W+ L+YCM+M DK PVQ EL+ NLAGL+ + + F SF TM R+W +D LR+DK+Y+LVR FVRE + + Q W+ L+ ++ EV++ P GLR+HLAD++ E NA G D+ TEAF+ L P+ + E + VF+R E VFE +L + K G + E+E+ KVF V++ +VQ +F +A+A T ++ R LY L++++
Sbjct: 3 NAASRFGQHLAHTEKKYRDRALKKLTVYLTKKT---EWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIPTAES-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVL-------LRDQD--------------------------WEEELVQEFVTILSTEVVS--QLPNGLRMHLADLYLTEIHNAAGKDVTTEAFMTLLEPFFTLL-NSEYDKTVFKRVRELVFEEMLTKY---KFGAQPEKEKDQXXXXXXXXXXXXDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYKKF 276
BLAST of Ec-28_001580.1 vs. uniprot
Match: A0A329RYE7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RYE7_9STRA) HSP 1 Score: 152 bits (383), Expect = 9.030e-35 Identity = 103/316 (32.59%), Postives = 164/316 (51.90%), Query Frame = 1
Query: 94 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEE-------------KKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRY 1002
N +FG+HLA ++K+ RDR + L +L ++ T+L+ K+W+ L+YCM+M DK PVQ EL+ NLAGL+ + + F SF TM R+W +D LR+DK+Y+LVR FVRE +A + Q W+ L+ ++ EV++ P GLR+HLAD++ E NA G ++ TEAF++ L P+ + + E + VF+R E VFE +L + K G + E+E+ KVF ++ +VQ +F +A+A T ++ R LY L++++
Sbjct: 3 NAASRFGQHLAHTEKKYRDRALKKLTVYLTKKK---EWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIPSAES-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVAL-------LRDQD--------------------------WEEDLVQEFVTILSTEVVS--QLPNGLRMHLADLYLTEIYNAAGKEVTTEAFMILLEPFFTLLSS-EYDKTVFKRVRELVFEDMLTKY---KFGPQSEKEKDDXXXXXXXXXXXSKVFEQFDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 275
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 961.4 |
Seed ortholog evalue | 2.7e-277 |
Seed eggNOG ortholog | 2880.D7FXP8 |
Preferred name | RRP1B |
Length | 3121 |
KEGG ko | ko:K14849 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-28_001580.1 |
GOs | GO:0000785,GO:0000791,GO:0000792,GO:0001652,GO:0003674,GO:0003712,GO:0003713,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010604,GO:0010628,GO:0010921,GO:0010923,GO:0010941,GO:0010942,GO:0016070,GO:0016072,GO:0019219,GO:0019220,GO:0019222,GO:0022613,GO:0030684,GO:0030687,GO:0030688,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0034260,GO:0034470,GO:0034641,GO:0034660,GO:0035303,GO:0035305,GO:0035821,GO:0042254,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043087,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043900,GO:0043902,GO:0043903,GO:0043921,GO:0043923,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045893,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0046782,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0050434,GO:0050789,GO:0050790,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051252,GO:0051254,GO:0051336,GO:0051346,GO:0051702,GO:0051704,GO:0051707,GO:0051817,GO:0051851,GO:0052312,GO:0052472,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0098586,GO:0140110,GO:1901360,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141 |
EggNOG free text desc. | rRNA processing |
EggNOG OGs | KOG3911@1,KOG3911@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01009,ko03009 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-28_001580.1 ID=Ec-28_001580.1|Name=Ec-28_001580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=837bp MASTTTAAGAGSDGGGDGGGGGPKALEPGAKNNEVKFGKHLASSDKRVRD RTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAEN LAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVR EALAFCCLPPPAVEGQPKQKKKKKGKKNSPAEEAETSAKAGGVWDLGLLG AMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALA PWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKKVFAA VELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSG ILPLPEESDDDEEEEGGGDGEYDGEYVEAGARLRAARGPEPAVAGWVAAG IASGAISSEEGGEEGGGKKAKKRRKRSGSEDDEAEVDGGGEKKKRRSGEE EEEEASAKKRQKQSRGSVEKDSGEVADAEAPAATRAGVEAGADAEAGAVT PGKKSAKKRKKVEASPPGGASNGAVTGEGTVVAAAANGDGVSSPPSSSKR KKKKKRRGSADGVATVADDDAAAAALSTVTAATPEAEAAAANGDGVSSPP SSGKRKKKNKGRVSADGVAADAGDDAAAAVSTATAAAPEAESAAPADVVA ESPSSSKKKKKGKEEEKVATPDAGESETTPEDDATTTPDSSSEKKKKKKK KKRPSLEAVASPTPLPGNTASEEVSAPSSGSFQTPPKNAGGGGGGSSSKK KKKKKSPAAGESARKTVTFGANMAKEHQKSVKDLKTRVITPSKDAGTPQK GLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF* back to topspliced messenger RNA >Ec-28_001580.1 ID=Ec-28_001580.1|Name=Ec-28_001580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3121bp|location=Sequence derived from alignment at chr_28:1441332..1450703+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTTCCACCACAACTGCTGCCGGTGCAGGCAGTGACGGTGGTGGTGA TGGTGGTGGTGGTGGTCCGAAGGCCCTCGAACCCGGCGCCAAGAACAACG AGGTCAAGTTCGGGAAGCACCTGGCCTCGAGCGACAAGCGAGTGCGCGAC CGCACGGTGGGCGCGCTGCGGGAGTGGCTCCGCCAGCGAAGCAGGGGGGG GAGCCTGACCGACTTGGACTTGCTCAAGATCTGGCGCGGGCTATGGTACT GCATGTTCATGTGCGACAAGGCTCCCGTCCAGCGAGAGCTCGCCGAGAAC CTGGCCGGCCTGCTTCGCCTCTTCAAGGACGACCGGGCTGAGGGTGTGCG CTTCTTCAAGTCCTTCTGTGTCACTATGCAGCGCGACTGGGAGCGTATCG ACAACCTCCGGATCGACAAGTACTACACCCTGGTGCGGGTGTTCGTCCGA GAGGCGCTGGCCTTCTGTTGCCTCCCCCCCCCGGCCGTGGAAGGCCAGCC CAAGCAAAAGAAAAAGAAGAAGGGCAAGAAGAACTCTCCAGCGGAAGAGG CAGAGACGTCCGCTAAGGCCGGCGGCGTGTGGGACCTAGGCCTCCTCGGC GCAATGTCGGACGTAATGGAGGTCGAAGTCCTTACGCTGCGCCCGGCCCC GATCGGCCTGAGGCTCCACCTCGCGGACGTCTGGGCGGAGGAGGCGTGCA ACGCGGGGGGCGCGGACATGCCCACAGAGGCGTTTCTGGTGGCGCTGGCG CCGTGGCTGAGGGTGGCCGCGGAACCAGAGACGAATCCGGTGGTGTTCCG GAGAACCTTTGAAGGGGTGTTCGAGGGACTCCTGGGGTTGTTCCCGGAAG ATAAGGATGGGATGGAAGAGGAGGAGGAGGAGAAGAAGGTGTTTGCGGCG GTGGAGTTGGACCGGGTGCAGGCGTGCTTGTTCGAGGTGGCCGCAGCCCC GCAGACCCGGGATAAACGCCGCGTGAAGCTGTACGAACTCCACCGCCGCT ATCAGAAGCGTACGGGGGTGACGCCCGACGCTACCGCGCCTCCCAGCGGC ATTCTTCCCCTCCCTGAGGAGTCTGACGATGATGAGGAGGAGGAGGGAGG GGGCGACGGGGAATACGACGGCGAGTACGTCGAGGCCGGCGCGAGGCTGC GCGCGGCGAGGGGACCAGAGCCGGCGGTGGCGGGTTGGGTGGCTGCCGGA ATCGCCTCCGGCGCCATCAGCTCGGAGGAGGGTGGAGAAGAGGGGGGTGG TAAGAAGGCCAAGAAGAGGAGGAAGAGGAGCGGCAGCGAGGACGATGAGG CGGAGGTAGACGGCGGTGGCGAGAAGAAGAAGAGGAGGAGCGGGGAGGAG GAAGAGGAGGAGGCTAGCGCCAAGAAAAGGCAGAAACAATCGAGAGGTTC GGTCGAGAAGGACAGCGGGGAGGTCGCTGACGCTGAGGCGCCGGCGGCTA CCCGTGCGGGAGTCGAAGCCGGGGCAGATGCTGAAGCGGGGGCCGTAACC CCTGGCAAGAAGAGCGCCAAGAAGCGCAAGAAGGTAGAGGCCTCTCCGCC GGGGGGTGCCTCCAACGGCGCCGTGACGGGGGAGGGGACGGTGGTGGCGG CGGCGGCCAACGGCGACGGCGTGTCGTCTCCCCCTTCGAGCAGCAAGCGC AAGAAGAAGAAGAAGCGCAGGGGCTCGGCCGATGGTGTGGCGACGGTTGC CGATGACGATGCGGCCGCCGCCGCTTTGTCAACGGTAACAGCAGCAACTC CGGAAGCGGAGGCAGCAGCTGCCAACGGCGACGGCGTATCGTCTCCCCCT TCGAGCGGCAAGCGAAAAAAGAAAAACAAGGGTAGGGTCTCGGCCGATGG TGTAGCGGCGGATGCTGGTGACGATGCGGCCGCCGCTGTGTCAACGGCAA CAGCAGCAGCTCCGGAAGCGGAGTCAGCAGCCCCGGCCGACGTAGTAGCG GAGAGTCCTTCCTCGAGCAAGAAGAAGAAGAAGGGCAAGGAGGAGGAAAA GGTGGCGACGCCTGATGCGGGAGAGTCGGAGACCACCCCCGAGGATGATG CAACAACCACCCCAGACTCGTCGTCAGAGAAGAAGAAGAAAAAGAAAAAG AAGAAGCGGCCTTCCCTCGAAGCGGTAGCGTCGCCGACACCCCTCCCCGG AAACACCGCCTCCGAAGAGGTTTCGGCGCCGTCCTCGGGTTCGTTCCAAA CCCCGCCGAAGAATGCCGGGGGCGGCGGCGGCGGCTCCTCTAGCAAGAAG AAGAAGAAGAAGAAGAGCCCGGCAGCCGGCGAGAGCGCGAGGAAGACCGT AACTTTCGGGGCCAACATGGCGAAGGAACACCAAAAGTCGGTAAAGGACT TGAAGACGCGGGTTATCACACCCTCGAAGGACGCTGGAACTCCCCAAAAG GGGCTCTTGAAGGTCGGCGGGGGGGGGTCCGGGGTCAAGCTCATGAAACC TGCGGCAGGGCGAAAGGATACCCCGTACGCCGGCAAGAAGAAGGCCTCCG ATTATTTCTAGTGTGAAAGGGCGGGGTGTAGTCATTGCCGTGCATGCCGT GGTCGTAGGCCATTGACCTCGCATCCCTGCAAAGCAAAGCAGGGACGGAG TAGAGGAGGGGGCGCAAACCGGGGTATTGGGGTGTAGAGATACGTTGGAC AGCTGGTGTGAAGTTTCCAGCAGTGATGATGCAGATCCGCCCTCTCGGTG AAAAGTGTGCTACGGTGTTCGTTGTTTTTTGTTATCCTTCTTTTCCGATG TTCTGACTTTTGAATCTCTCTCACACGTGGGCGGGCCTGGCTGTGCTGTT GGCTCTGCCTTTTGGTGTATTTTAGTCGTTGTTCGATCCTGCAAACCGTA TTTATTGATCACTTCGCCTACTTTATCATGCCAAGGAACCAGCTTAAATG GCGTGGACCGATTTTCCTCGGGATTGAATATCAGCGCAGTTCCTCGAACG TGATGGCCCCCTTCTCTTCTCCGTTGGTAGTAGTAGGTGAACGTGTCGCT TGGTGACTTGTTGATGGACCTGTTGAGCAAAATGACGTTCCGAACACAGC GCGGGCTGTAGGCAAAACGGTTTGGCACACAACAGCAGGAACATGACACA CAATACACGGAGCAACGAGCG back to topprotein sequence of Ec-28_001580.1 >Ec-28_001580.1 ID=Ec-28_001580.1|Name=Ec-28_001580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=837bp
MASTTTAAGAGSDGGGDGGGGGPKALEPGAKNNEVKFGKHLASSDKRVRD RTVGALREWLRQRSRGGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAEN LAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVR EALAFCCLPPPAVEGQPKQKKKKKGKKNSPAEEAETSAKAGGVWDLGLLG AMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALA PWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKKVFAA VELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSG ILPLPEESDDDEEEEGGGDGEYDGEYVEAGARLRAARGPEPAVAGWVAAG IASGAISSEEGGEEGGGKKAKKRRKRSGSEDDEAEVDGGGEKKKRRSGEE EEEEASAKKRQKQSRGSVEKDSGEVADAEAPAATRAGVEAGADAEAGAVT PGKKSAKKRKKVEASPPGGASNGAVTGEGTVVAAAANGDGVSSPPSSSKR KKKKKRRGSADGVATVADDDAAAAALSTVTAATPEAEAAAANGDGVSSPP SSGKRKKKNKGRVSADGVAADAGDDAAAAVSTATAAAPEAESAAPADVVA ESPSSSKKKKKGKEEEKVATPDAGESETTPEDDATTTPDSSSEKKKKKKK KKRPSLEAVASPTPLPGNTASEEVSAPSSGSFQTPPKNAGGGGGGSSSKK KKKKKSPAAGESARKTVTFGANMAKEHQKSVKDLKTRVITPSKDAGTPQK GLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF* back to topmRNA from alignment at chr_28:1441332..1450703+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-28_001580.1 ID=Ec-28_001580.1|Name=Ec-28_001580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9372bp|location=Sequence derived from alignment at chr_28:1441332..1450703+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGGCTTCCACCACAACTGCTGCCGGTGGTGAGTTGGTCAAACCCTGCTG
TGTAGCGTGAGTAGCTCTTACCCCTCGATGCAGAACCGTGTGCGGAGTGG
TACGTACCCGATCAGTTATTGTCGAACTGCGAGCACGCAGGTACTGCTGT
AGGTAGTACGCCAGGCGCGCTCAACCGAAACCTCTCCCCTTTTCCCGCGT
GCAAGTTGGGTGCCGAGTTACCCGCGAGGGTGTGACAAGCGGCGACAGTC
CGATCAATACTGTTTGCGTCGAGGATTACGGCGGCCGACATGCGTCTCGT
TTTAGGATCTGGCGGAGATTTTTTCTTGTCTCAAAAAACATTCACCTTGT
AGACTAATTCCTTGGCTTGATTTTTGAATCCGAAGGAAGATCGATTGGGT
GCATCGCAGGCCGAAATTCAGCTCTTCCAAGAGACGGCCGCACGGCAGTG
AGACACGAGAGAAGAGCTGAGCCTGTAAAACGCCAGAATCTTGCTAAATA
GACTTTTTTTGACGGCCGTGGTGTTGGTGCGTCTCTCCCACACGTACGCT
GAGTCCCGCACTGCCTGTCTTCGTTGCGGTGTTGGCAGCAGGCAGTGACG
GTGGTGGTGATGGTGGTGGTGGTGGTCCGAAGGCCCTCGAACCCGGCGCC
AAGAACAACGAGGTCAAGTTCGGGAAGCACCTGGCCTCGAGCGACAAGCG
AGTGCGCGACCGCACGGTGGGCGCGCTGCGGGAGTGGCTCCGCCAGCGAA
GCAGGGGGGGGAGCCTGACCGACTTGGACTTGCTCAAGGTGACATGTGCA
TGCATGCGTGCGTCGTACGTACGTACGTACGTACGAACGTGGTGACCCGC
CTGTCCTCTGTCGTCCTTCTTTCGTTTGTAGGAAAGATGCATACAACTAC
AGAAAGACTATCCGTTCGAGACATGACCACAGTCGAAGGGGATGGGTTCA
ACAATTTTCAGCGAGTGCGGGAAATATCCGCTGGGTACTTTTATCCTTAG
CCTGGATACTGAGCTTGTTTTTGAGTCAATTTTTTAGCTTTTGTAGAGAA
TACTCCACGTACCAACACGGAGAGACTATTCGTTCGAGACATCACCGCAG
TCGCAGGGGATATATTGAAGTATTTTGTTGAACCCCCACCGACGATGATG
ACGAAAAGACACGTCGCCGGGGGCGGACTGGACACACCGGGTTTGATTCT
ACAGTTGTACGTGGCCACTTGGGTCCATCAACCTGAATCCCTTGTCGGGG
TCAGGCGCTTCGCGGGGTGGCGAAGGACGCCACACTGCAGGCGGGGGGGG
GGATCGTGATAGTGGCCTGTCTGGTCGTCGCAAGGTGGAAGTCATTTTTC
CTTGGTGTATACAAGAGTTTCGTTGCCCGCAGTATGCAAACGGAAACGCC
CTCGCACATTGCGACGACGGAGCACCTGACTTTTGTTTCTTGCTTAGTCC
TGGAGTGGGACGGGCTTGGTGATGTGAAGAGACCAGTGCCGCTTCGCCGC
GGTGCAGCAAACCACAAGTATTATTTATCACGCGCGCTTTTTCTCTCCCG
CCATCTTCTTCTTATCGTCTTTCCTTTTTCCCCGAACTGAACGAACGAAC
GAAATTTGTCAAGATCTGGCGCGGGCTATGGTACTGCATGTTCATGTGCG
ACAAGGCTCCCGTCCAGCGAGAGCTCGCCGAGAACCTGGCCGGCCTGCTT
CGCCTCTTCAAGGACGACCGGGCTGAGGGTGTGCGCTTCTTCAAGTCCTT
CTGTGTCACTATGCAGCGGTGAGTTGGCCTTTTTTTTTTTTTGGAACGTA
AGAGGCGGAGAGATGGCACCTCCCGTAGACCCACTTTCGAATATCGATTG
CTCCACAACCAAGATTGTCTGTACCGTACCGTATACCGTACCGTGGTATT
CCGTACGGGGCGGAGAGATGGCACCCCTTCTAGACCGACTTTCAAAGCTC
GATTGCTCCACAACCAAGTGGTGCAGGAAGAGCCCGATGCGTCTACGCCA
TGTCTTCGACGAGACATTTCCAAAACCACCATTTTTGGTATTGGCACAAT
CGTGGTCGTGGAGCAATCGAGCTTTGAAGGTCGGTCTAGGGGGGTGCCAT
CTCTCCGCCTCTTACGGAATACCACGGTACGGTATACAGTACGGTACAGA
CAATCGTGGTTGTGGAGCAATCGAGGTTTGAAAATCGGTCTAGGGGGGTG
CCATCTCTCCGCCTCTTGCACTATTCCAGCAGAAAGGTATACATACACCG
AGCTTTGCTTGTGCACAATATTCCTCGCGCAGATAGCGGGCTCTGGCTAG
ATTTATGGAGGCATTATGTGTGGAGGTGGCATCCTCGCCGTGGAAGACAA
TATTTACATGTCCACACGGTACAAATGACTCGGATTTACTCATGTCTGGG
CCCTTTGTTTTTCCTCTCGTTGCTCAAAGAGCGAGTTTTGTAGAGCCTCG
TCGCCCTCAGTGTTGATTGTTGTTCTGATGTGATGAGCTTCACGCTGTGG
ACGCCGCCCCAGTCATATGCCTCCTCCTCCAAACGGAGGGGCCGTGGTGA
AAAACACACGCTAATTCGTATCTGATCAGAATTTTTTGCTTTGCACGAGG
GTTCCATCCGATGACGCGGTGCCTGCACCACCGAACCGGTAGGCGTTAGT
GACGGTCGGCAATGGTGCACAACACACCTCGATTCAACGGTCACATTTTC
TCAACGGATAGTAACAGTGGCGGGAGAGGAAGAAAAGAACGTGGAGAATT
GGCTCCGCAATCAAATTCGTTGTTGCCGACCCCCTCGGGAAAGTTCCTGC
CAGCGTACCAGCTTTGCGCAGCTCTGCAGTTGGGCAAGTCCACAAAGTGT
TCCCATACTTGGTGGTGCGTAAAAAGTGTTCTCTGTGCCCGGTTGCTGTC
TAGATTACCCTTCTGTTGCGATTTTTTTTGCAGGCAACTGCGGGGATTTT
CTGTCATCACTGTGCTTGACTAACCTTGTCCCACCAGCCCCGCTGTTGCT
GTTGTGCTCACATTAAAAACCAACCCGGTCTCTGCTCAGTCCCATCCTAG
CATTCGTGCCGATTCTGGTGCCGTTGTTGGCACTAACATGCAGCACCTTC
CCTGCCGCCATCCCTCCCGTGCGTTTACTTTGCTCTCCGCACACCCGAAA
AGCGACTGGGAGCGTATCGACAACCTCCGGATCGACAAGTACTACACCCT
GGTGCGGGTGTTCGTCCGAGAGGCGCTGGCCTTCTGTTGCCTCCCCCCCC
CGGCCGTGGAAGGCCAGCCCAAGCAAAAGAAAAAGAAGAAGGGCAAGAAG
AACTCTCCAGCGGAAGAGGCAGAGACGTCCGCTAAGGCCGGCGGCGTGTG
GGACCTAGGCCTCCTCGGCGCAATGTCGGACGTAATGGAGGTCGAAGTCC
TTACGCTGCGCCCGGCCCCGATCGGCCTGAGGCTCCACCTCGCGGACGTC
TGGGCGGAGGAGGCGTGCAACGCGGGGGGCGCGGACATGCCCACAGAGGC
GTTTCTGGTGGCGCTGGCGCCGTGGCTGAGGGTGGCCGCGGAACCAGAGA
CGAATCCGGTGGTGTTCCGGAGAACCTTTGAAGGGGTGTTCGAGGGACTC
CTGGGGTTGTTCCCGGAAGATAAGGATGGGATGGAAGAGGAGGAGGAGGA
GAAGAAGGTGTTTGCGGCGGTGGAGTTGGACCGGGTGCAGGCGTGCTTGT
TCGAGGTGGCCGCAGCCCCGCAGGTGACCAAAAGAATGAGAGACCATCTT
CTATTTCAAACAACACTGCCTTGGTCGAGCTAGTCCCCGACCTGCAGCTT
AAGCTTTCCCATGCGGGATGAATGTTGTATACATGTTTTTCGCCTGTTTT
CTGAGCCCGGTGCGCCGCATGCAAGCGCCGCCGTCCGCCGTCCGCCTCCG
GACTCTCCGAGGGAAACCCGTTTGAGACTACAGCCTACAGCCAATGCCCA
CTTGGCCGAGGGTACGATATGTTTTACACCGTAGTTCCATTTTGTGCGTA
CTTATGCCCGTCTTCGTCATCGTTTCACGTACAAGTATCGCTGCTGATCC
GCCGCCTGCCTGCATCACCACAAACTCTGTCTCGACGCTCTCGGCCGTAT
TCCATCAATGCTCCCTCTTATTGCCGACCCAACCCCCCCCCTCCCCCCCT
ACCCATCAGACCCGGGATAAACGCCGCGTGAAGCTGTACGAACTCCACCG
CCGCTATCAGAAGCGTACGGGGGTGACGCCCGACGCTACCGCGCCTCCCA
GCGGCATTCTTCCCCTCCCTGAGGAGTCTGACGATGATGAGGAGGAGGAG
GGAGGGGGCGACGGGGAATACGACGGCGAGTACGTCGAGGCCGGCGCGAG
GCTGCGCGCGGCGAGGGGACCAGAGCCGGCGGTGGCGGGTTGGGTGGCTG
CCGGAATCGCCTCCGGCGCCATCAGCTCGGAGGAGGGTGGAGAAGAGGGG
GGTGGTAAGAAGGCCAAGAAGAGGAGGAAGAGGAGCGGCAGCGAGGACGA
TGAGGCGGAGGTAGACGGCGGTGGCGAGAAGAAGAAGAGGAGGAGCGGGG
AGGAGGAAGAGGAGGAGGCTAGCGCCAAGAAAAGGCAGAAACAATCGAGA
GGTTCGGTCGAGAAGGACAGCGGGGAGGTCGCTGACGCTGAGGCGCCGGC
GGCTACCCGTGCGGGAGTCGAAGCCGGGGCAGATGCTGAAGCGGGGGCCG
TAACCCCTGGCAAGAAGAGCGCCAAGAAGCGCAAGAAGGTAGAGGCCTCT
CCGCCGGGGGGTGCCTCCAACGGCGCCGTGACGGGGGAGGGGACGGTGGT
GGCGGCGGCGGCCAACGGCGACGGCGTGTCGTCTCCCCCTTCGAGCAGCA
AGCGCAAGAAGAAGAAGAAGCGCAGGGGCTCGGCCGATGGTGTGGCGACG
GTTGCCGATGACGATGCGGCCGCCGCCGCTTTGTCAACGGTAACAGCAGC
AACTCCGGAAGCGGAGGCAGCAGCTGCCAACGGCGACGGCGTATCGTCTC
CCCCTTCGAGCGGCAAGCGAAAAAAGAAAAACAAGGGTAGGGTCTCGGCC
GATGGTGTAGCGGCGGATGCTGGTGACGATGCGGCCGCCGCTGTGTCAAC
GGCAACAGCAGCAGCTCCGGAAGCGGAGTCAGCAGCCCCGGCCGACGTAG
TAGCGGAGAGTCCTTCCTCGAGCAAGAAGAAGAAGAAGGGCAAGGAGGAG
GAAAAGGTGGCGACGCCTGATGCGGGAGAGTCGGAGACCACCCCCGAGGT
GCTAGAGTATCCCGCCTGTTTTGTTTTCGTTGCCGCCGCCGATCGACAAA
TTTGAAAGCTCGTCTTGGCGGTCACCTTGCCGGCATGGGGCAATGGAGCC
CCCCCCGGTTCGTCTCTTCGCGGTTAACCGTTTCCGTCAACCCCAGTTTG
CTTACACGAATGCATTTGGAAGCGTGGCCGATAGGCATTGCTGCTCGATG
TCGTTGGTTCTCGGCTTTCGACAGGAAGTTTTCAACTGTATTTTCATTCA
TTGTATAGTAGGTCACTGAATCAAGTCTGCCTTCTACACGGACCGAATAG
GGATGGATGTGGGCTCTTGGTTCAAGCCCTGGCCGATGTGTACGCCTGAC
CGGTCGCTCGTTCCAACTTGTGCTGATGAGAACGAGAGAACCAACGGGTT
ACGGTTGGGCGAGATAGAGCCGTTTCAAGTGTAGGCCTTGTTGGATAACT
TGACATTCTCATTGTTCCCGCGACGACGAAGAGCCGTTTCAAATCAAGGT
CTTCTAGAATGACATTCTCAATGTCCCCGTGCCCTCCTTGTTTTTGGGAA
CCCCATCTAGGATGATGCAACAACCACCCCAGACTCGTCGTCAGAGAAGA
AGAAGAAAAAGAAAAAGAAGAAGCGGCCTTCCCTCGAAGCGGTAGCGTCG
CCGACACCCCTCCCCGGAAACACCGCCTCCGAAGAGGTTTCGGCGCCGTC
CTCGGGTTCGTTCCAAACCCCGCCGAAGAATGCCGGGGGCGGCGGCGGCG
GCTCCTCTAGCAAGAAGAAGAAGAAGAAGAAGAGCCCGGCAGCCGGCGAG
AGCGCGAGGAAGACCGTAACTTTCGGGGCCAACATGGCGAAGGGTGAGCA
GGTGATGGTGTCGCGAAAGTTCAATATCTTGGAACGCAAGATATAGAAGT
CGGGGTATCTGTCTTGGGCAATAATTTCGAGCGTTTCGTCCGCGAACAAA
ATTATCTGCTGTAGGACGGGTTCGTTCTGTTTCCCTTCGTTGCTGTCGAG
CGCTGCGATTTTGAGCATTTCTAAGGTTGAAAGTCAGCACCGTTCGTAGG
GCACCCACCCAACTCTGAGATGATGAGCTTCACGCTGTGGATGCCGCCCC
AGTCATACGCTTCTTCCTCCAAACGGAGGGGCCATGGTGACAAACACACG
CTAATTCGTATCTGATCAGAACTGCTGTTGCGAGTGTGAGTGAGCACATG
TTGCGTGGCGCTTGCTCATACGTACTTCCGCCGAGGCATAGGTAGTTGTA
AAAAAACAATAATAAACATACCCCAGTTTGACACATTTCCTCGTCGGGAT
GGTTGCGACCGGCATGATTGGCTTCCATTGAACCGGCATCACGTCGTTAT
GATCCTGTGTTTCTAGTTTCTACAAGCCTCGTGTAGAGTGCGCCGGGGCC
TTGTCTCGATTGGGACTGGGCACTCTGGTGCCTTTTTGTTGGATATTTTC
TCATGTTTTTGTTGCAAATGCTGATGCTGGGTACTTCTGCCGTGCGTCCG
AAATATTTGCTGATGGCGAGAAATTCTGGATGATCTTCACAGCTTAACGC
TGCGCACAAAAGCCTCAGCCCATCGTGCTTCTCCAAACGAAGGATTCCCT
GTTGACAGCCACCCTTTACTTCGTCGCTCGAAGGACAAGGCTCTTGTTCC
AATCGCATCGACTTTGTTTGTCTTTGTTTCTTTTTCTCGTAACGGTAGAG
TCCACGTTACGAACTTTGCGGATGACGAGAAATTCTGAGATGATGAGCTT
CACGCTGTGGATGCCGCCCCAGTCATATGCCTCCTCCAAATGGAGGGGCC
GTGGTGACAAACACACGCTAATTCGTAGCTGATCAGAACACATCGATTGT
GCATTTTTTCCATCTCTTTGTTATGATTTAATGCCATCAGTATCCCTGCG
CGACAGGGAGTACTGAACAGTAGCAAGCAACACGATTTCTACGTCTCGCT
GATGTTAGCGAAGTTTTCTGAAATGATGAGCTTCACGCTGTGGATGCCGC
CCCAGTCATATGCCTCCTCCAAATGGAGGGGCCGTGGTGACAAACACACG
CTAATTCGTAGCTGATCAGAACACATCGATTGTGCATTTTTTCCATCTCT
TTGTTATGATTTAATGCAACAGTATCCCTGCGCGACAGGGAGTACTGAAC
AGTAGCAGGCAACACGATTTCTACGTCTCGCTGATGTTAGCCGAAGTTTT
CTGAAATGATGAGCTTCACGCTGTGGATGCCGCCCCAGTCATATGCCTCT
TCCAAATGGAGGGGCCGTGGTGACAAACACACGCTAATTCGTAGCTGATC
AGAACACATCGATTGTGCATTTTTTCCATCTCTTTGTTCTGATTTGATGC
CATCAGTATCCCTGCGCGACAGGGAGTACTGAACAGTAGCAGGCAACACG
ATTTCTACGTCTCGCTGATGTTAGCGAAGTTTTCTGAAATGATGAGCTTC
ACGCTGTGGATGCCACCCCAGTCATAGGCCTCTTCCAAATGGAGGGGCCG
TGGTGACAAACACACGCTAATTCGTAGCTGATCAGAACACATCGATTGTG
CATTCTATCTCTTTGTTCTGATTTGATGCCATCAGTATCCCTGTGCGACA
GGGAGTACTGAACAGTAGCAGGCAACACGATTTCTACGTCTCGCTGATGT
TAGCGAAGTTTTCTGAAATGATGAGCTTCACGCTGTGGATGCCGCCCCAG
TCATATGCCTCCTCCAAATGGAGGGGCCGTGGTGACAAACACACGCTAAT
TCGTAGCTGATCAGAAGTCTCCCCATGCCTTGTGTATTTAGTTCTCGAAG
TCCCAGAAGCTGATGTTGGTCCACGTCTTTGTCACCTGTTGGACACCTCG
CACCTTTGTGCTTTCCCACGAAAGATGGCGTTGTTACTATGCAAAAATGA
TAACGTTGTTGCAAATCCAAGCAAGGCAAGAATGGCGGCGTCCCTAGTCC
ACCGTTTGTTGTCGGTGAGCGCAGGTACACAAGAAGAACTTGTTGCCTCT
CAACGCTGTGGGCTCGTCTGTCTCTCTTTAACCCCACAGCCTGAAAAACT
CCTCTCTTGAAAAGTCGAATCTTGCGAGTTTCAAGCGGACAACTGTCCGA
TACCTCATGTGCGGTAAGCCAACAACAGGAATGGTACTTCTCAACTGACT
TTAGCGCACAATCAAAACCTACTGTCGAGATCTAGTTGGGAAATCCCAAT
GACAGATCAAAAAGTGTTTGAAAAAGATGGAACACCAGACCTTGAAACAA
GAACCTGCATGGTCTCGGAGCTCAAAAATACGCCACCCTCCCCCGCCCCC
CCCCCGCCTCTTTTTTGCTGGCCCCAGAACACCAAAAGTCGGTAAAGGAC
TTGAAGACGCGGGTTATCACACCCTCGAAGGACGCTGGAACTCCCCAAAA
GGGGCTCTTGAAGGTCGGCGGGGGGGGGTCCGGGGTCAAGCTCATGAAAC
CTGCGGCAGGGCGAAAGGATACCCCGTACGCCGGCAAGAAGAAGGCCTCC
GATTATTTCTAGTGTGAAAGGGCGGGGTGTAGTCATTGCCGTGCATGCCG
TGGTCGTAGGCCATTGACCTCGCATCCCTGCAAAGCAAAGCAGGGACGGA
GTAGAGGAGGGGGCGCAAACCGGGGTATTGGGGTGTAGAGATACGTTGGA
CAGCTGGTGTGAAGTTTCCAGCAGTGATGATGCAGATCCGCCCTCTCGGT
GAAAAGTGTGCTACGGTGTTCGTTGTTTTTTGTTATCCTTCTTTTCCGAT
GTTCTGACTTTTGAATCTCTCTCACACGTGGGCGGGCCTGGCTGTGCTGT
TGGCTCTGCCTTTTGGTGTATTTTAGTCGTTGTTCGATCCTGCAAACCGT
ATTTATTGATCACTTCGCCTACTTTATCATGCCAAGGAACCAGCTTAAAT
GGCGTGGACCGATTTTCCTCGGGATTGAATATCAGCGCAGTTCCTCGAAC
GTGATGGCCCCCTTCTCTTCTCCGTTGGTAGTAGTAGGTGAACGTGTCGC
TTGGTGACTTGTTGATGGACCTGTTGAGCAAAATGACGTTCCGAACACAG
CGCGGGCTGTAGGCAAAACGGTTTGGCACACAACAGCAGGAACATGACAC
ACAATACACGGAGCAACGAGCG back to topCoding sequence (CDS) from alignment at chr_28:1441332..1450703+ >Ec-28_001580.1 ID=Ec-28_001580.1|Name=Ec-28_001580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2511bp|location=Sequence derived from alignment at chr_28:1441332..1450703+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGGCTTCCACCACAACTGCTGCCGGTGCAGGCAGTGACGGTGGTGGTGA TGGTGGTGGTGGTGGTCCGAAGGCCCTCGAACCCGGCGCCAAGAACAACG AGGTCAAGTTCGGGAAGCACCTGGCCTCGAGCGACAAGCGAGTGCGCGAC CGCACGGTGGGCGCGCTGCGGGAGTGGCTCCGCCAGCGAAGCAGGGGGGG GAGCCTGACCGACTTGGACTTGCTCAAGATCTGGCGCGGGCTATGGTACT GCATGTTCATGTGCGACAAGGCTCCCGTCCAGCGAGAGCTCGCCGAGAAC CTGGCCGGCCTGCTTCGCCTCTTCAAGGACGACCGGGCTGAGGGTGTGCG CTTCTTCAAGTCCTTCTGTGTCACTATGCAGCGCGACTGGGAGCGTATCG ACAACCTCCGGATCGACAAGTACTACACCCTGGTGCGGGTGTTCGTCCGA GAGGCGCTGGCCTTCTGTTGCCTCCCCCCCCCGGCCGTGGAAGGCCAGCC CAAGCAAAAGAAAAAGAAGAAGGGCAAGAAGAACTCTCCAGCGGAAGAGG CAGAGACGTCCGCTAAGGCCGGCGGCGTGTGGGACCTAGGCCTCCTCGGC GCAATGTCGGACGTAATGGAGGTCGAAGTCCTTACGCTGCGCCCGGCCCC GATCGGCCTGAGGCTCCACCTCGCGGACGTCTGGGCGGAGGAGGCGTGCA ACGCGGGGGGCGCGGACATGCCCACAGAGGCGTTTCTGGTGGCGCTGGCG CCGTGGCTGAGGGTGGCCGCGGAACCAGAGACGAATCCGGTGGTGTTCCG GAGAACCTTTGAAGGGGTGTTCGAGGGACTCCTGGGGTTGTTCCCGGAAG ATAAGGATGGGATGGAAGAGGAGGAGGAGGAGAAGAAGGTGTTTGCGGCG GTGGAGTTGGACCGGGTGCAGGCGTGCTTGTTCGAGGTGGCCGCAGCCCC GCAGACCCGGGATAAACGCCGCGTGAAGCTGTACGAACTCCACCGCCGCT ATCAGAAGCGTACGGGGGTGACGCCCGACGCTACCGCGCCTCCCAGCGGC ATTCTTCCCCTCCCTGAGGAGTCTGACGATGATGAGGAGGAGGAGGGAGG GGGCGACGGGGAATACGACGGCGAGTACGTCGAGGCCGGCGCGAGGCTGC GCGCGGCGAGGGGACCAGAGCCGGCGGTGGCGGGTTGGGTGGCTGCCGGA ATCGCCTCCGGCGCCATCAGCTCGGAGGAGGGTGGAGAAGAGGGGGGTGG TAAGAAGGCCAAGAAGAGGAGGAAGAGGAGCGGCAGCGAGGACGATGAGG CGGAGGTAGACGGCGGTGGCGAGAAGAAGAAGAGGAGGAGCGGGGAGGAG GAAGAGGAGGAGGCTAGCGCCAAGAAAAGGCAGAAACAATCGAGAGGTTC GGTCGAGAAGGACAGCGGGGAGGTCGCTGACGCTGAGGCGCCGGCGGCTA CCCGTGCGGGAGTCGAAGCCGGGGCAGATGCTGAAGCGGGGGCCGTAACC CCTGGCAAGAAGAGCGCCAAGAAGCGCAAGAAGGTAGAGGCCTCTCCGCC GGGGGGTGCCTCCAACGGCGCCGTGACGGGGGAGGGGACGGTGGTGGCGG CGGCGGCCAACGGCGACGGCGTGTCGTCTCCCCCTTCGAGCAGCAAGCGC AAGAAGAAGAAGAAGCGCAGGGGCTCGGCCGATGGTGTGGCGACGGTTGC CGATGACGATGCGGCCGCCGCCGCTTTGTCAACGGTAACAGCAGCAACTC CGGAAGCGGAGGCAGCAGCTGCCAACGGCGACGGCGTATCGTCTCCCCCT TCGAGCGGCAAGCGAAAAAAGAAAAACAAGGGTAGGGTCTCGGCCGATGG TGTAGCGGCGGATGCTGGTGACGATGCGGCCGCCGCTGTGTCAACGGCAA CAGCAGCAGCTCCGGAAGCGGAGTCAGCAGCCCCGGCCGACGTAGTAGCG GAGAGTCCTTCCTCGAGCAAGAAGAAGAAGAAGGGCAAGGAGGAGGAAAA GGTGGCGACGCCTGATGCGGGAGAGTCGGAGACCACCCCCGAGGATGATG CAACAACCACCCCAGACTCGTCGTCAGAGAAGAAGAAGAAAAAGAAAAAG AAGAAGCGGCCTTCCCTCGAAGCGGTAGCGTCGCCGACACCCCTCCCCGG AAACACCGCCTCCGAAGAGGTTTCGGCGCCGTCCTCGGGTTCGTTCCAAA CCCCGCCGAAGAATGCCGGGGGCGGCGGCGGCGGCTCCTCTAGCAAGAAG AAGAAGAAGAAGAAGAGCCCGGCAGCCGGCGAGAGCGCGAGGAAGACCGT AACTTTCGGGGCCAACATGGCGAAGGAACACCAAAAGTCGGTAAAGGACT TGAAGACGCGGGTTATCACACCCTCGAAGGACGCTGGAACTCCCCAAAAG GGGCTCTTGAAGGTCGGCGGGGGGGGGTCCGGGGTCAAGCTCATGAAACC TGCGGCAGGGCGAAAGGATACCCCGTACGCCGGCAAGAAGAAGGCCTCCG ATTATTTCTAG back to top
Synonyms
The feature 'Ec-28_001580.1' has the following synonyms
Synonym |
Esi0033_0003 |
Esi_0033_0003 |
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