Ec-28_001570.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_001570.2
Unique NameEc-28_001570.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length133
Homology
[Close]
BLAST of Ec-28_001570.2 vs. uniprot
Match: A0A6H5KY37_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY37_9PHAE)

HSP 1 Score: 399 bits (1024), Expect = 3.860e-132
Identity = 224/318 (70.44%), Postives = 240/318 (75.47%), Query Frame = 1 
Query:  154 VYPFLDKDPALAIPLACPLHPELDVFKDQSCTRDWCQENWILFSVATARTIQDGVLHGQAHGQQTRGPAEPRRKRRYRPR-H*TGTRALPR--RPVPGA---------GVR*HAADSCSVEIHAGGGSSLGTGAGTIRRGCGACDPADMERRRRRCRALFHGCFDDSTGSAGSDGGIVDAGPGRETGGFGSTGDYFVRQFCDHLACDDHHRPLAPPVDGGPANRGHPLPRGGVDGVGTGKPKVFLIVVVVIGLVVLYASMALRRWSTSTRHDLRPARRGRVSRGSDRAESRSATAFATGVRGSSGQELRQRRVTQALG 1071
            VYPFLDKDPALAIP ACPLHPELDVFKDQ   +              + T Q G  H Q    +T    +     ++  R +  G+ A+     P PG          G   +AADSCSVEIHA GGSSLG GAGTIRRGCGACDPADMERRRRRCRALFHGCFDDS GSAGSDGG+VDAGPGRETG  GS GDYFVRQFC+HLACDDHHRPLAPPVDGGPAN  HPLP GGVDGVGTGKP+VFLI VVVIGLV+ YASMA+R  STSTRHDLRPAR GR SRGSDRAESRSATAFATGVRGSSGQE+RQRR TQALG
Sbjct:   24 VYPFLDKDPALAIPPACPLHPELDVFKDQELHKRLVP--------GKSDTFQCGYCHKQF---KTEFYMDRHMDNKHADRLNLAGSDAIGHGIEPAPGRCLGDLCPELGCGDYAADSCSVEIHARGGSSLGEGAGTIRRGCGACDPADMERRRRRCRALFHGCFDDSNGSAGSDGGVVDAGPGRETGDSGSIGDYFVRQFCNHLACDDHHRPLAPPVDGGPANHRHPLPHGGVDGVGTGKPRVFLIAVVVIGLVIFYASMAVRLRSTSTRHDLRPARTGRASRGSDRAESRSATAFATGVRGSSGQEIRQRRGTQALG 330
[Close]
BLAST of Ec-28_001570.2 vs. uniprot
Match: D7FXP7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP7_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 8.560e-63
Identity = 128/200 (64.00%), Postives = 137/200 (68.50%), Query Frame = 1 
Query:  151 SVYPFLDKDPALAIPLACPLHPELDVFKDQSCTRDWCQENWILFSVATARTIQDGVLHGQAHGQQTRGPAEPRRKRRYRPR-H*TGTRALPR--RPVPGA---------GVR*HAADSCSVEIHAGGGSSLGTGAGTIRRGCGACDPADMERRRRRCRALFHGCFDDSTGSAGSDGGIVDAGPGRETGGFGSTGDYFVRQ 714
            SVYPFLDKDPALAIPLACPLHPELDVFKDQ   +                T Q G    Q    +T    +     ++  R +  G+ A+     P PG          G   +AADSCSVEIHAGGGSSLGTGAGTIRRGCGACDPADMERRRRRCRALFHGCFDDSTGSAGSDGGIVDAGPGRETGGFGSTGDYFVRQ
Sbjct:   23 SVYPFLDKDPALAIPLACPLHPELDVFKDQELHKRLVP--------GKLDTFQCGYCQKQF---KTEFYMDRHMDNKHADRLNLAGSDAIGHGIEPAPGRCLGDLCPELGCGDYAADSCSVEIHAGGGSSLGTGAGTIRRGCGACDPADMERRRRRCRALFHGCFDDSTGSAGSDGGIVDAGPGRETGGFGSTGDYFVRQ 211
The following BLAST results are available for this feature:
BLAST of Ec-28_001570.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY37_9PHAE3.860e-13270.44C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FXP7_ECTSI8.560e-6364.00C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1435088..1440376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1819
Hectar predicted targeting categorymitochondrion
Gene idEc-28_001570.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001570Ec-28_001570Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 1435081..1440381 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001570.2Ec-28_001570.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 1436050..1437472 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001570.2.6Ec-28_001570.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1435088..1436188 -
Ec-28_001570.2.5Ec-28_001570.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1436783..1436894 -
Ec-28_001570.2.4Ec-28_001570.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1437325..1437626 -
Ec-28_001570.2.3Ec-28_001570.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1438425..1438487 -
Ec-28_001570.2.2Ec-28_001570.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1439303..1439392 -
Ec-28_001570.2.1Ec-28_001570.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1440226..1440376 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0015703UTR:Ec-28_001570.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 1435088..1436049 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001570.2CDS:Ec-28_001570.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 1436050..1436188 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0015705UTR:Ec-28_001570.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 1437473..1437626 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_001570.2 ID=Ec-28_001570.2|Name=Ec-28_001570.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=133bp
MPRTPVAWRSTPVADRRWARARGRSGGGAGPVTPRTWSGGDAGAGRCSTV
ASTTQLAAPVLTEALLMRDLDEKPGVSEAPAIILCDSSATTSRATTTTVP
SLLPSTGGPRTAGTPSPAGVSTALGRESQKFF*
back to top

spliced messenger RNA

>Ec-28_001570.2 ID=Ec-28_001570.2|Name=Ec-28_001570.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1819bp|location=Sequence derived from alignment at chr_28:1435088..1440376- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GCGGGCCACAGACGCACACCACCGCCGCAGTAGCGGTGGCCAGGACACAC
GGCGTGGTGCACACTTACGACGACATCGGGGCGCAATGTCGGCCAATGAA
AGCAGTTGCTCTAGGGAGCATTCGCGCCAGGCACGGAAGATCATTGCTAA
GAGCGTCTACCCGTTCCTGGATAAAGACCCGGCGCTGGCTATCCCTCTAG
CATGCCCGCTCCACCCAGAGCTCGACGTATTCAAGGACCAGGAGTTGCAC
AAGAGATTGGTGCCAGGAAAATTGGATACTTTTCAGTGTGGCTACTGCCA
GAAGCAATTCAAGACGGAGTTCTACATGGACAGGCACATGGACAACAAAC
ACGCGGACCGGCTGAACCTCGCCGGAAGCGACGCTATCGGCCACGGCATT
GAACCGGCACCCGGGCGCTGCCTCGGCGACCTGTGCCCGGAGCTGGGGTG
CGGTGACTATGCCGCGGACTCCTGTAGCGTGGAGATCCACGCCGGTGGCG
GATCGTCGTTGGGCACGGGCGCGGGGACGATCAGGAGGGGGTGCGGGGCC
TGTGACCCCGCGGACATGGAGCGGAGGAGACGCCGGTGCAGGGCGCTGTT
CCACGGTTGCTTCGACGACTCAACTGGCAGCGCCGGTTCTGACGGAGGCA
TTGTTGATGCGGGACCTGGACGAGAAACCGGGGGTTTCGGAAGCACCGGC
GATTATTTTGTGCGACAGTTCTGCGACCACCTCGCGTGCGACGACCACCA
CCGTCCCCTCGCTCCTCCCGTCGACGGGGGGCCCGCGAACCGCGGGCACC
CCCTCCCCCGCGGGGGTGTCGACGGCGTTGGGACGGGAAAGCCAAAAGTT
TTTCTGATCGTGGTTGTCGTGATCGGGCTGGTCGTCTTGTACGCCAGCAT
GGCGCTCAGGCGATGGTCGACGTCAACGCGGCACGATCTACGCCCGGCGA
GAAGAGGCCGAGTCAGCAGGGGCAGTGATCGGGCGGAGAGCCGTAGCGCT
ACTGCTTTTGCGACTGGCGTTCGAGGCTCTTCCGGGCAGGAGCTGCGGCA
GCGGCGCGTCACGCAAGCCCTGGGTTGATCTTATCGCGTCTTTTTTTCCC
ACCGTTGAGAATAAGGTGTCTACGGACTATTTTCACACATCCACGATTGT
GAAGAAGATGACGATCGCGAGGATGCATCTCTCTGTTTCGAAAAAGCTCG
AAGATGTTGAGGTTTTTTGGGGGGGAAGGTGGTGGCCTCCCGTCGATAGT
CTAAGGTACGTTCGGCGGCTGAGGGGATGTGCGGGACTATTTCGTTGCAC
TTGTACGTACGGCAGTGCGCGTAGTATTGCGAGTTAAAACGCCGCGAAGA
ACGACGCGCGCCTTGAATGTCCAAAACTGTGGGTGGTGTGGTGGACTTCT
GTTATGATCCCGCATCCGGCTTCAAGTTGGCATTTCTTCGAGTGGCGATA
TGTGTTTGAGGCACACCCCGCCCGATGCTGATCGACGGATATCTCGGGGG
ATCAAGTGCAGGATCTACTGCTGTAGTTTGTGAAGGCTTCAAGGTATTTG
CATATATGAATATTTTGTTGCTGGACGATGCGCCGGAGGGGGCGGCTCAA
TTTCAGCGTCGTGGGTGAATCACGTAAACATCCACTGTAACAAGTAATCA
GAGTTGACATCGCAACGAGAAGCTTGGTTGGCGTCATCCGCAACGAATCT
CGCAAGCCACAGCTTTGATATTTAGTGACTTGGAAAAAAAAACATAAACG
GTAGACTAAATGCTCAGCCGTCTTGTGTCGTGGATAACTACTGCGCTGTA
GACCTACTGCTGCTGTAGA
back to top

protein sequence of Ec-28_001570.2

>Ec-28_001570.2 ID=Ec-28_001570.2|Name=Ec-28_001570.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=133bp
MPRTPVAWRSTPVADRRWARARGRSGGGAGPVTPRTWSGGDAGAGRCSTV
ASTTQLAAPVLTEALLMRDLDEKPGVSEAPAIILCDSSATTSRATTTTVP
SLLPSTGGPRTAGTPSPAGVSTALGRESQKFF*
back to top

mRNA from alignment at chr_28:1435088..1440376-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_001570.2 ID=Ec-28_001570.2|Name=Ec-28_001570.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5289bp|location=Sequence derived from alignment at chr_28:1435088..1440376- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GCGGGCCACAGACGCACACCACCGCCGCAGTAGCGGTGGCCAGGACACAC
GGCGTGGTGCACACTTACGACGACATCGGGGCGCAATGTCGGCCAATGAA
AGCAGTTGCTCTAGGGAGCATTCGCGCCAGGCACGGAAGATCATTGCTAA
GGTCAGCAACGAAAGCTACTTTCACGACGAGAACAATCCGCCGCGTCACT
TGCTATATTAGTGCCGCAACACGCCGCTTGTATCCCACTCGCAGACACCT
GATGTGTGATGAACTTCAGCGCGCGTCTACAGCAAGCCGCTGCATGTTGT
CGAGAAAGACAGAGAAAAAGCCGCAGCACTGCCGTAGGCAATTGGCCGGC
AGGTCACTGCACCTTTGTGCGGCACAACTACTGAAGATCTTGAAAATTGA
GTCACGCCGCACCTGGGTTGATGATGCCCAGCAGGTCTCCGCTCCCAGCA
TGTTACACACTCCATCTTTTCATGTCAGTAAGGTTGGCCGGGAGCCACAT
CAGTGACCTTAATTGAAATACACAACATCTGTGTGGCAAGGGTTGGTCTC
ATAAGATGTAAACGTTATTCTAAACATGTTACTCTGTTTTTGTTGACTGC
TGTGAGGGGCAACACGAGCTTGTACCGCCGTGACTGCTGTAGGTAATTAC
AGCGGGACACCCAGTGCAGCAGTATTGTCCGTGCAAGTAGCAGTGTTGAC
AATACCGATGCACAGAACATCGCATGCTTTCCGAACTTGTACAAAAGAAA
CGCAGGAAGGCCAATACCAAGCGAAACGTAGCCGTATGTGACAGGACAGG
AGGCCTTTTCTCTTTGGCAAACAAGAATCCAAGCGAGCCTATTGACTACA
GGTTGAGTCACATTGGCCTCCGTCCTTGTCTCTGAAGCAGAATATGTTAA
ATTTGGAGTGCCTTCACTGACGGTGCTCGCACCCCTTCACATTTTCTTGC
GTCCCCATCTTGTTTTGTCCATCTCGCGGACAAGAGCGTCTACCCGTTCC
TGGATAAAGACCCGGCGCTGGCTATCCCTCTAGCATGCCCGCTCCACCCA
GAGCTCGACGTATTCAAGGACCAGGTATGGCGATTTGCACAGTTGTCTTT
GAGTTTAAAGTTTAAACTCAGATAAACAGCAGTGGCCAGTTTGAATATGG
GCCGCTAAAGCCTAGCCTAGATATTGACAAAGGAAGTACATCGGGTACCT
TTGCGAGAACTCGTCGCATGTTGTTCTTTTTTGGGCGGGGCGTAGCCTTC
CAGCGGCTGACAGGATTTAAGTGAGCATGGGGTGCGAATAGTCGCATGGT
TCGCCGAACGCTGGACTTTTTTTCCTGATCAGAGTATTTCCCACTGGCAC
TCATGATTTCAGTGTTCCCGCCACATGTTGTTGTCGTTGTCATCGTCGCT
ACATCGAAAACGTTCTGCCTCTGTCTGTGCACCTCCTCTTCCGTACTCTT
CAAGGCCAGGACAACGCATGAATAATTTTGTTGAACACCATGGTGATCAA
ACATACCAGTATGTCGCCCAAAAAATCCAATGGCGAAGGGGCGCGAAAAA
GGAAAGTGTTTTTGATTTCAACGTGTATCCTTGGATCAGTTTTTGATTTT
AGAGCATGTCGCTACAACAGGTGTCGCCTGCTACTTGTACAAGCGCCATT
TGCCATCATCAGGCGTACCTCGTGCTGCCATGAGCGGCTTCACGATTACT
CGCTTAGCGGCTCTGTACGTTGGAGGAGAAAGGCGTGGACAAACGTCGGG
AGCTGGCGTTGACCTCAGCACATCACGACGCCTGCAGAGCACCCTCAGTG
GCGCCGACTGCACAGCGACTACCCAGTCCAACTGTCAAAGTAAACGTCGT
CGTCCTTGCCTTTGCTCGACCACTGGATGCCTCGTGCAGGAGTTGCACAA
GAGATTGGTGCCAGGAAAATTGGATACTTTTCAGTGTGGCTACTGCCAGA
AGGTACGCAAACGTATGGGGGCACCGCAGAAGGGGCCGCAGTAGTTTGTT
GACTCCTCCTAGCCACTGGGATAAAGAGACTACCATGCTCCTCCTGTTGA
ACAGGGAGCACCAGCCATGTTCGCTACTGCAGCCTCTGCAATGCTTTCCA
AGCTGCTTGTCTGGGGGGATAGTGCTTTGTGTAGGTTTGTGTGTCAAGCG
GTGTTTTTTGTTCATAGTGAGATCGTGAAGAACGATAGAGCGTGAGAGAG
ACACAGGGAGATAAGATACGGGAGAGGACGGAGAAGAATCGGGAGTTCGG
CTGGGCACGGATGCTCTGGGGCCCGTTTGCAGCTGCTGGCTAGAGCTGAG
TAGTGCAGCACACCCGGGCAACACCGCAACAGAAATGTACCACGTTGTGG
TCTCACTGGAGAAGTTGGCGGCGCGGTTATGACAGCACGTTCGTGGCTGC
TGTGGCCCACCGTTGCATAGGGGGGGGGGCTCGGCCTCTGGGGTATGGGC
TCGTCTGTTCTTTCAGGCTGACCTGCGTTGGCACTAAGAATCACGCTTCT
AGTACACCACGCGCAAAGAAGCATTTTTAATTGTTTCTGTCGGATTGCAA
GGCGGATGGAGCATCTGGAAGCATTTCTCTTTGTCGGTATGCATGTGTAT
TTCGTTCTTGCTCAACCTCCGAGCCGCAAAAGATATCCCCAGACTCGAGA
GTAGTAGATCGCAACCGTTCTCCCTTGCAAGGGCACCCGCGCTCACCCGT
ACCGCTCCTGGCTAATGTGCTTACCCTCCTCCCTCGACGGGCCCTGGCAG
CAATTCAAGACGGAGTTCTACATGGACAGGCACATGGACAACAAACACGC
GGACCGGCTGAACCTCGCCGGAAGCGACGCTATCGGCCACGGCATTGAAC
CGGCACCCGGGCGCTGCCTCGGCGACCTGTGCCCGGAGCTGGGGTGCGGT
GACTATGCCGCGGACTCCTGTAGCGTGGAGATCCACGCCGGTGGCGGATC
GTCGTTGGGCACGGGCGCGGGGACGATCAGGAGGGGGTGCGGGGCCTGTG
ACCCCGCGGACATGGAGCGGAGGAGACGCCGGTGCAGGGCGCTGTTCCAC
GGGTACGCAGTGGCGTGGACATGTATGCTTGTTCGTTCTGTTTGTGGCTC
GTCTCTCTGCCTCTTTGCCGCTCCGCTTCTCTTCCCGCCTCTGTCTGTCT
GTCTGTCTATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGT
CTGTCTGTCTGTGTTCTCTGTTATTGTAGCACACGGCGCCCCAAAGTGTG
CTCTTTCGCCGCGTGGCTGTCTGCCCTCGACGTCTCCACATTGATTGGTC
TAGCGACCGGGTATTCCGGTTTGTGGTGTCTGCCGAACTGTGTGTTTCGA
CGTGCTTCCAATTTTTGCTTTGGTTCCTCCTTCTGTTTTCCTGCTTTTGG
CTACAGTTGCCTGTTGCCGCCGTTGGTTCCGCTACCCCCCGCCGCCACGC
CACTTTTTTGTTGGTTTTGCTGGACGATGCAGTTGCTTCGACGACTCAAC
TGGCAGCGCCGGTTCTGACGGAGGCATTGTTGATGCGGGACCTGGACGAG
AAACCGGGGGTTTCGGAAGCACCGGCGATTATTTTGTGCGACAGGTGAGG
AAGAGCATGCGAGCAGTACGATAAAAAAGCCGGAGACGCTGTGCTTGTTC
TTGTCGTGTTGTTTCTTATCTCGCTTTTCTGTCATAACAGTTCTGAATCC
TCTGGCGATTCGCCTCGTAACCTTCTCTTTGTTCTCCAACGCTGACAACT
CACAGGATCCTTGGTCTTCCTCTGTGTCTTTGTCTGTCGAGCTGGGGTCT
CGAGATCGGGTCTTGGGCTAGATGGGAGCTCAGATTAGATACGTTTGTAT
TGCACAACGGCGAGTTTCTCTTTCCCAGAAGCATGTTTCTTCTGAAGTTG
ATGCCATGTTTCGTTAGCGCTTCTATATAGACGGATCTGACAAGACTCCC
ATGAGTGAGAGGCCTATTCTCTTTGTGACAACCAGCACCAAACAGCAGAA
CCAATCAAATGAATTTCGGCGGCTTCTGCCCGGAACACCCTGGGCATTCA
GGATGTGCTCGAGCGTGTAGACGGCGGCGTTTCGCCAGGCACTTTGTTTT
CGTTCCCCATTTTGACTAGCAGGATTTCCTTTAACCAACGCACAGCCGAC
AGATACCCTCGCGTTTCGCCCTCCCGTCGCCTCTCCAGTTCTGCGACCAC
CTCGCGTGCGACGACCACCACCGTCCCCTCGCTCCTCCCGTCGACGGGGG
GCCCGCGAACCGCGGGCACCCCCTCCCCCGCGGGGGTGTCGACGGCGTTG
GGACGGGAAAGCCAAAAGTTTTTCTGATCGTGGTTGTCGTGATCGGGCTG
GTCGTCTTGTACGCCAGCATGGCGCTCAGGCGATGGTCGACGTCAACGCG
GCACGATCTACGCCCGGCGAGAAGAGGCCGAGTCAGCAGGGGCAGTGATC
GGGCGGAGAGCCGTAGCGCTACTGCTTTTGCGACTGGCGTTCGAGGCTCT
TCCGGGCAGGAGCTGCGGCAGCGGCGCGTCACGCAAGCCCTGGGTTGATC
TTATCGCGTCTTTTTTTCCCACCGTTGAGAATAAGGTGTCTACGGACTAT
TTTCACACATCCACGATTGTGAAGAAGATGACGATCGCGAGGATGCATCT
CTCTGTTTCGAAAAAGCTCGAAGATGTTGAGGTTTTTTGGGGGGGAAGGT
GGTGGCCTCCCGTCGATAGTCTAAGGTACGTTCGGCGGCTGAGGGGATGT
GCGGGACTATTTCGTTGCACTTGTACGTACGGCAGTGCGCGTAGTATTGC
GAGTTAAAACGCCGCGAAGAACGACGCGCGCCTTGAATGTCCAAAACTGT
GGGTGGTGTGGTGGACTTCTGTTATGATCCCGCATCCGGCTTCAAGTTGG
CATTTCTTCGAGTGGCGATATGTGTTTGAGGCACACCCCGCCCGATGCTG
ATCGACGGATATCTCGGGGGATCAAGTGCAGGATCTACTGCTGTAGTTTG
TGAAGGCTTCAAGGTATTTGCATATATGAATATTTTGTTGCTGGACGATG
CGCCGGAGGGGGCGGCTCAATTTCAGCGTCGTGGGTGAATCACGTAAACA
TCCACTGTAACAAGTAATCAGAGTTGACATCGCAACGAGAAGCTTGGTTG
GCGTCATCCGCAACGAATCTCGCAAGCCACAGCTTTGATATTTAGTGACT
TGGAAAAAAAAACATAAACGGTAGACTAAATGCTCAGCCGTCTTGTGTCG
TGGATAACTACTGCGCTGTAGACCTACTGCTGCTGTAGA
back to top

Coding sequence (CDS) from alignment at chr_28:1435088..1440376-

>Ec-28_001570.2 ID=Ec-28_001570.2|Name=Ec-28_001570.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=399bp|location=Sequence derived from alignment at chr_28:1435088..1440376- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCGCGGACTCCTGTAGCGTGGAGATCCACGCCGGTGGCGGATCGTCG
TTGGGCACGGGCGCGGGGACGATCAGGAGGGGGTGCGGGGCCTGTGACCC
CGCGGACATGGAGCGGAGGAGACGCCGGTGCAGGGCGCTGTTCCACGGTT
GCTTCGACGACTCAACTGGCAGCGCCGGTTCTGACGGAGGCATTGTTGAT
GCGGGACCTGGACGAGAAACCGGGGGTTTCGGAAGCACCGGCGATTATTT
TGTGCGACAGTTCTGCGACCACCTCGCGTGCGACGACCACCACCGTCCCC
TCGCTCCTCCCGTCGACGGGGGGCCCGCGAACCGCGGGCACCCCCTCCCC
CGCGGGGGTGTCGACGGCGTTGGGACGGGAAAGCCAAAAGTTTTTCTGA
back to top
Synonyms
The feature 'Ec-28_001570.2' has the following synonyms
Synonym
Esi0033_0002
Esi_0033_0002