Ec-28_001440.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_001440.1
Unique NameEc-28_001440.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length738
Homology
BLAST of Ec-28_001440.1 vs. uniprot
Match: D8LGW1_ECTSI (Ca2+/calmodulin-dependent protein kinase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW1_ECTSI)

HSP 1 Score: 1414 bits (3659), Expect = 0.000e+0
Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 3
Query:  162 MMQKLPSLPRMVRNDSKAAPKCIGAGDFGKDFHRNFIVGSKKIAQGTTANLYEGKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRLEAVQCPTG 2372
            MMQKLPSLPRMVRNDSKAAPKCIGAGDFGKDFHRNFIVGSKKIAQGTTANLYEGKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRLEAVQCPTG
Sbjct:    1 MMQKLPSLPRMVRNDSKAAPKCIGAGDFGKDFHRNFIVGSKKIAQGTTANLYEGKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRLEAVQCPTG 737          
BLAST of Ec-28_001440.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 676 bits (1743), Expect = 3.240e-231
Identity = 369/746 (49.46%), Postives = 488/746 (65.42%), Query Frame = 3
Query:  144 KGGYTRMMQKLPSLPRMVRNDSKAAPKCIG--AGDF-GKDFHRNFIVGSKKIAQGTTANLYEGKMKCKRETDCRRY-AINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLY-RTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASG------DASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRL 2348
            + G  R+ +K  ++  M   D       +G   GDF  K+F+R F +G + + QG +  +++G +K K +   +   AI +V  F L++ +K+A+ RE+ IL+ L+HPNIVK++  Y +    YY+V+E+L GGEL D +V+KD+Y EREARDVCK LVDA+ ++H + IVHRDL+PG++LLA                                                              A    +S SLKI DFGKA SVREGP+ +     EF APE+L+ + H    DMWS+GLI  +LLSG +PFF  D  +MF+RVA    +FKP  WR+IS EA+DF++ LL V   KR+TA++AKSH WL A+ ESL A DL  NL+ +KV +AKRKLRA MKT++ A+R+   L PT      Y     LGEGAYG VF+AT           D +  G  AAPR  AVKRI++EGL+ +E  ++I EANIMREL+HPN+VSIY FY+DDPK+FY+ LELMEGGEL DRIVQK YYNEAEARDVC+  L A++Y H QG+VHRDLKPENLLLAS SD +SIRLADFGFA S+ DG + + CGTP YVAPE+L++ PYG SVDMWS+GVII+++LAG PPFHD DQ  ++RKIK+G Y+F  ++W  +S +AKDLI KLLTVDP +RLTA+EAC+HPWL+T   NL+ H+L A LE+LK+FN  RKLRAA+++V+     A+ L
Sbjct:    2 RSGMRRLEEK--AISSMYSKDDGKDRDMVGIKVGDFEAKNFYRYFSLGDQ-LGQGASGKVFKGTIKKKGKGGGKMLCAIKRVRKFHLKERKKQALFREVQILRGLDHPNIVKIYQFYPKDTGYYYVVMEFLLGGELFDHVVKKDTYNEREARDVCKQLVDAMGYIHSRGIVHRDLRPGNLLLA--------------------------------------------------------------AQGAGASGSLKIADFGKAMSVREGPVTTNGGAPEFVAPEVLLGKPHDTSPDMWSIGLIAFMLLSGAHPFFEPDTTKMFIRVAAADYQFKPTEWRNISGEAQDFISNLLVVATTKRLTAEQAKSHPWLLASAESLEARDLCDNLQTFKVFNAKRKLRATMKTVLAARRMFSWL-PTDEFSKAYQLGNMLGEGAYGMVFKATPALPASLSEEEDGADDGSAAAPREYAVKRIKREGLSDQEEQEVIAEANIMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSVLLSKKIARDL 681          
BLAST of Ec-28_001440.1 vs. uniprot
Match: A0A6H5K409_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K409_9PHAE)

HSP 1 Score: 655 bits (1689), Expect = 5.250e-226
Identity = 367/479 (76.62%), Postives = 404/479 (84.34%), Query Frame = 3
Query:  162 MMQKLPSLPRMVR-----NDSKAAPKCIGAGDFGKDFHRNFIVGSKKIAQGTTANLYEGKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINE 1583
            MMQKL S PR+ R     ND       I  G+FGKDF+RNFI+GSKKIAQGTT N+YEGK KC+ +  CR YAI KVGG+QL++ QKE M REM ILK+LEH NIVKVF LY TP  Y+MVLEYL GGELL  IVRK+SY ER+AR+VC+VLVDA+SH+H+KSIVHRDLKPGSILLA+P+   GDQG  +TS TTP     XXXXXXXXX    +RGNMKVTXXXXXXXXXXXX  PV APARV+ DSLKITDFG+ARSV EGPIKS WVKSEFSAPEMLM+E HGPPVDMWSLGLITHILLSGNNPFFHE+EQQM+LR+AKG+CEFKPEIWRSISP+AKDFVAKLLKVDP +RMTAQEAK H WLHAAGESLG GDLRGNLE YK+ DAKRKLRALMKTL+  KRL+DSL+P KPDLSKYA VKKLGEGAYGQVFQATRIASGDA A GVGAAPRYIAVKRI+KEGL  KE  DIINE
Sbjct:    1 MMQKLSSFPRVTRVTRPPNDDANG---IQGGEFGKDFYRNFILGSKKIAQGTTGNVYEGKKKCESKNGCR-YAIKKVGGWQLKRPQKEDMHREMRILKVLEHKNIVKVFQLYTTPRAYFMVLEYLGGGELLGRIVRKESYSERDAREVCRVLVDAISHVHEKSIVHRDLKPGSILLASPQ---GDQGAPTTSITTPXXXXXXXXXXXXXXXXXXVRGNMKVTXXXXXXXXXXXXTSPVHAPARVA-DSLKITDFGEARSVSEGPIKSTWVKSEFSAPEMLMREEHGPPVDMWSLGLITHILLSGNNPFFHENEQQMYLRIAKGSCEFKPEIWRSISPKAKDFVAKLLKVDPGQRMTAQEAKKHEWLHAAGESLGGGDLRGNLEEYKLLDAKRKLRALMKTLMATKRLMDSLEPAKPDLSKYALVKKLGEGAYGQVFQATRIASGDAGATGVGAAPRYIAVKRIRKEGLRTKEKRDIINE 471          
BLAST of Ec-28_001440.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE)

HSP 1 Score: 618 bits (1593), Expect = 1.610e-208
Identity = 343/725 (47.31%), Postives = 440/725 (60.69%), Query Frame = 3
Query:  321 GKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLY-RTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIA------SGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINE----------------------------------------------------ANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTV 2318
            GKM C         AI +V  F L++ +K+A+ RE+ IL+ L+HPNIVK++  Y      YY+V+E+L GGEL D +V+ D+Y EREARD+CK LVDA+ ++H + IVHRDL+PG+ILLA                                                              A    +S SLKI DFGKA SV EGP+ +     EF APE+L+ + HG   DMW +GLI  ++LSG +PFF  D  +MF+RVA    +FKP  W  IS EA+DF++ LL VD  KR+TA++AKSH WL A+ ESL   DL  NL+  K+ +AKRKLRA+MKT++ A+R+   L PT      Y     LGEG YG VF+AT I        GD +  G  AAPR  AVKRI++EGLT +E                                                           A IM ELNHPN+V+IY FY D+PK+FY+ LELMEGGEL DRIVQK YYNEAEARDVC+ +L A++Y+H QG+VHRDLKPENLLLAS SD +SIRLADFGFA S+ DG + + CGTP YVAPE+L+  PYG SVDMWS+GVII+++LAG PPF D DQ  ++RKIK+G Y+F+ ++W  +S +AKDLI KLL VDP +RLTA+EAC+HPWL+T   NL+ H+L A LE+LK+FN  RKLRAA++TV
Sbjct:   14 GKMLC---------AIKRVRKFHLKERKKQALFREVQILRGLDHPNIVKIYQFYPNDTGYYYVVMEFLLGGELFDHVVKNDAYSEREARDICKQLVDAMEYIHSRGIVHRDLRPGNILLA--------------------------------------------------------------AQGAGASGSLKIADFGKAMSVCEGPVTTNGGAPEFVAPEVLLGKPHGTSPDMWCIGLIAFMVLSGAHPFFEADTTKMFIRVAAADYQFKPNEWSKISGEAQDFISNLLVVDTTKRLTAEQAKSHPWLLASAESLETRDLCDNLQSLKLFNAKRKLRAMMKTVLAARRMFSWL-PTDEFSKDYQLGDMLGEGTYGMVFRATPILPANFLEGGDGADDGSAAAPREYAVKRIKREGLTDQEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPETVATIMHELNHPNLVTIYDFYRDNPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTV 666          
BLAST of Ec-28_001440.1 vs. uniprot
Match: A0A835YSJ7_9STRA (Phosphorylase kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ7_9STRA)

HSP 1 Score: 450 bits (1158), Expect = 4.380e-144
Identity = 255/678 (37.61%), Postives = 385/678 (56.78%), Query Frame = 3
Query:  339 RETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFG--KARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRY----IAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLING-CGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRLE 2351
            R +D RR+A   V   +L  + + A+  E  +L  L+HPNIV++   Y     +Y+ LE   GGEL D IV+K  Y EREARD+ ++L++A+++ H++ I+HRDLKP ++LL + ED                                                                  ++K+ DFG  K  ++ +G + +      + APE+L ++ +G  VDMWS+G+I +ILL G  PF  E++ ++F+++ KG   F P+ W +IS +AKD + KLL VDP +R+TA +A  H W+ A+   L    L   LE     +A+RKL++ + T+V+A +L + L   +     Y   K+LG GA   V +            GV   P      +A+K +++  L ++E   +  E +IM +L HPN++ +   ++D  K  Y+ +EL  GGEL DRIVQK  Y+E+EAR++   LLRAV Y HS+G+VHRDLKPENLLL S  D  ++++ADFGFA  +    L+   CGTP YVAPE+L  VPYG  VDMWSVGVI ++LL G PPF+D +Q  +F KIK GE++F   +W  IS  AKDLI ++LTVDPA+R+TA +A +HP+L  D+  L   N+S  LE++++FN  RKLR+A+ +++A+      ++
Sbjct:   47 RNSDGRRFATKVVSRRKLPPVDEAALRSEAKVLMALDHPNIVRLVGWYEEKDVFYVPLELCEGGELFDRIVQKSCYTEREARDLVRMLLEAIAYCHERGIMHRDLKPENLLLVSKEDDA----------------------------------------------------------------TIKVADFGFAKVANIPKG-LHTQCGTPGYVAPEILKRQPYGKEVDMWSVGVICYILLGGYPPFHDENQVRLFMKIKKGTFTFHPQYWATISEDAKDLITKLLVVDPAQRITAAQALKHPWIRASASVLMERGLFNTLERLTAFNARRKLKSAIATVVLANKLAN-LVKARDIKDHYELGKQLGTGACSVVCK------------GVSKRPETKGEEVAIKIVRRLELPERERAALTAEMDIMLKLRHPNILRLIDSFQDTEK-LYMVVELARGGELFDRIVQKVTYDESEARELVRCLLRAVAYCHSRGVVHRDLKPENLLLVSTEDDAAVKIADFGFADHVAPDKLLKTQCGTPGYVAPEILMRVPYGKEVDMWSVGVICYILLGGYPPFYDDNQTKLFLKIKRGEFEFHEQYWGSISDQAKDLIRRMLTVDPAQRITAEQALQHPYLQIDSEALQTTNMSVNLERMRLFNARRKLRSAIHSIIAVQALTNLID 645          
BLAST of Ec-28_001440.1 vs. uniprot
Match: D8LE50_ECTSI (Phosphorylase kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE50_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 2.020e-143
Identity = 260/674 (38.58%), Postives = 370/674 (54.90%), Query Frame = 3
Query:  339 RETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFG--KARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIR-DGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRLE 2351
            R +D ++ A+  V    L K   EA+  E  +L  L+HPNIVK+   Y    T YM LE   GGEL D IV K  Y E+EARD+ + L+  V HLHD++I+HRDLKP ++LL + +D                                                                  +LKI DFG  K    R   +K+      + APE+L    +G PVDMWS+G+IT+ILL G  PF  +++ ++F ++ +G   F  + W  IS  AKD +A++L VDP KR+TA +A +H W+ +  + L   +L  +L+  +V +A+RK ++ + T+++  +L   L     D   Y     LG+GAY  V  A    + D            +AVK +++ GL + +   + +E  IM EL+HPN++ +  F+E    +FY+ +E + GGEL DRIV+K  YNE EARD+   LL+AV+Y H +GIVHRDLKPENLLL S  D   +++ADFGFA     +  L   CGTP YVAPE+L    Y A+VDMWSVGVI ++LL G PPFHD +Q  +F KIK G Y F  ++W  IS +AKDLI K+LTVDP KRLTA +A +HP+L  D   L  +N+   L ++K+FN  RK ++A++TV+      K  E
Sbjct:   37 RISDRQKSAVKVVERRSLGKGDLEALRSEARLLGELDHPNIVKLHGWYEEEKTLYMALELCEGGELFDRIVSKTFYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKQDNA----------------------------------------------------------------NLKIADFGFAKKHDARSEVLKTQCGTPGYVAPEILKSTPYGSPVDMWSIGVITYILLGGYPPFHDDNQARLFQKIRRGKFSFHEQYWDPISDGAKDLIARMLTVDPAKRITAAQALAHPWVMSEDDELETSELGDSLQRMRVFNARRKFKSAIATIIMTMQLQKFLASRDID-DAYEIGGVLGKGAYSVVKSAKAKKTND-----------EVAVKIVKRAGLPQDDEKALKDEMAIMLELDHPNIIKLLDFFEKKD-HFYMVVEKVRGGELFDRIVEKVVYNEKEARDLVSTLLQAVKYCHDRGIVHRDLKPENLLLVSEKDDALVKVADFGFAQKFMPESGLTTQCGTPGYVAPEILMRKKYDAAVDMWSVGVITYILLGGYPPFHDDNQARLFAKIKKGVYSFHDEYWSDISPEAKDLIAKMLTVDPNKRLTADQALEHPYLKIDTTVLEGNNMDQNLGRMKLFNARRKFKSAIQTVIVADRLRKFTE 633          
BLAST of Ec-28_001440.1 vs. uniprot
Match: A0A8K1C336_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C336_PYTOL)

HSP 1 Score: 421 bits (1082), Expect = 1.570e-131
Identity = 241/673 (35.81%), Postives = 370/673 (54.98%), Query Frame = 3
Query:  357 RYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQ-PTKPDL---------SKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASI-RDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAK 2342
            +YA+  +    L +   EA++ E+ IL+ ++HP+I+ ++ ++     YY+V E ++GGEL + IV K+ Y E+EARD+ K L++ + + HD ++VHRDLKP ++L+ +  D                                                                   +K+ DFG A+ V    + +A     + APE+L Q+ +G  VD+WS+G+IT+ILL G  PF  + +  +F ++  G  EF    W +IS +AKD ++K+L VD ++R TA +  +H W+   G  +    L   LE  +  +A+R+ RA + T+     L  +L   TK             +Y   ++LG GAY  V++     +G+          +Y AVK +Q  GL++ +      E  I++E+ HPN++ +Y  Y ++  Y YL  EL+ GGEL DRIV+K+YY+E EARD+   LL  +++ H + +VHRDLKPENLLL S  D  +I+LADFGFA  I  +  L+  CGTP YVAPE+L   PYG SVD+WS+G+I ++LL G PPFHD +Q L+FRKIK+G + F   +W  +S DAKDLI K+L VDPA+R TA++  +H W+T +   +S   L   LE+L+ +N  R+ ++AV TV A    AK
Sbjct:  135 KYAVKCIERDGLSEEDIEALTTEVEILQQMKHPHIMALYDVFTEANHYYLVTELVTGGELFERIVEKNFYSEKEARDLVKTLLETIKYCHDNNVVHRDLKPENLLMTSKSDDA----------------------------------------------------------------DIKLADFGFAKRVTGDGLATACGTPGYVAPEILAQKPYGKTVDIWSIGIITYILLCGYPPFHDDSQSMLFRKIKAGKFEFDSPYWDNISVDAKDLISKMLIVDTKQRWTADQLLTHKWI--TGTDVATVPLTKTLEELRRFNARRRFRAAVSTVQATISLTKALSMSTKRQTMIYTNRHIRDEYTLGRELGSGAYSVVYEGINKKTGN----------KY-AVKAMQIAGLSEDDIEAFHQEVEILKEMQHPNIMRLYAVYLEEATY-YLVTELVAGGELFDRIVEKSYYSEKEARDLVKVLLDTIKFCHDRKVVHRDLKPENLLLTSKEDDANIKLADFGFAKKIVEETGLVTTCGTPGYVAPEILSRTPYGTSVDIWSIGIITYILLCGYPPFHDDNQALLFRKIKAGRFVFDSPYWDNVSEDAKDLIKKMLIVDPAERWTATQLLEHKWITGE--EVSTTPLLTALEELRKYNARRRFKSAVTTVKATLSLAK 727          
BLAST of Ec-28_001440.1 vs. uniprot
Match: A0A1V9YB44_9STRA (Phosphorylase kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB44_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 2.120e-120
Identity = 248/727 (34.11%), Postives = 370/727 (50.89%), Query Frame = 3
Query:  285 KIAQGTTANLYEGKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNIVKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDAVSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSXXXXXXXXXSREEIRGNMKVTXXXXXXXXXXXXXXPVVAPARVSSDSLKITDFGKARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGY----KVSDAKRKLRALMKTL------------------------------------VVAKRLVDSLQPTKPDLSK--YACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLK--NVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFN-TVRKLRAAVKTVVAMS 2330
            K+ +G TA +Y    K       +R A+      ++ + +   +  E+GILK+++HP+I+++   +  P  +Y+V + L GGEL D I+ K+ Y E+EARD+ K+L+ A+ +LHD +IVHRDLKP ++LL +                                                                R    S+KI DFG A+   EG +       E+ APE+L +  +G  VD+WS G+IT+ILL G  PF   +   +F  +  GA +F+   W  +S EAK FV+K+L VDP  R +  E  +  W+     S     +   L  +    K   A + +RA +  L                                     V  R+ DS     P   +  Y     LGEG+Y  V +A   ASG           +  AVK  +KE L++++  D++ E  I+R+L+HPNV+ +  FY + PKY+YL  E +EGGEL +RI    YY+E EAR++   LL A+ Y HS G+VHRDLKPEN+LL S +D ++I++ADFGFA    +G L   CG+P YVAPE++   +  YG++VD+WS+GVI +VLLAG  PFHD +Q ++F  I +G + F    W  +S +AKD +++ L +DP KR +A E  K PWLT    N+S  NL+  +E+L  FN T RK RAAV+  + ++
Sbjct:   82 KLGEGATATVYVATHK----KHGKRVAVKCFDKAKMAQNEIRDLFTEVGILKLMKHPHILQLHDFFEEPTHFYIVTDLLEGGELFDRIIEKEYYSEKEARDLVKLLLQALQYLHDLNIVHRDLKPENVLLMS----------------------------------------------------------------RGDDTSIKIADFGFAKMDFEGKLTDKCGSPEYIAPEILSRSYYGKQVDIWSAGVITYILLCGYPPFSGRNNTVLFNNIKAGAFQFESPYWDDVSAEAKAFVSKMLVVDPSARASVDELLNDVWITGEVSSAPLNGVMDELRRFNARRKFKAAVKTVRATVSLLNDARARSASAPMTPPAQEPTDDEDMDEKETRPSVATTVMARMDDSNDDPSPGFFRENYTLGGVLGEGSYAIVKKARSHASG-----------QLCAVKIFKKESLSEQDDADVLTEVRILRKLDHPNVLRLLDFYSE-PKYYYLVTEYVEGGELFERIALMEYYSEKEARELVKTLLEAIGYCHSLGVVHRDLKPENILLTSKADNSAIKIADFGFAKQDTNG-LSTTCGSPEYVAPEIISRPDETYGSAVDIWSIGVITYVLLAGYTPFHDPNQNILFDNICNGRFYFYEPDWNEVSQEAKDFVSRALELDPKKRPSAKELLKDPWLT--GLNVSDRNLTGVIEKLPTFNQTRRKFRAAVQATMLVN 725          
BLAST of Ec-28_001440.1 vs. uniprot
Match: A0A835YM32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM32_9STRA)

HSP 1 Score: 373 bits (957), Expect = 2.660e-114
Identity = 199/489 (40.70%), Postives = 304/489 (62.17%), Query Frame = 3
Query:  888 SLKITDFGKARSVREGP-IKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGNNPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRMTAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAKRLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAPRY----IAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLING-CGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMF 2336
            ++K+ DFG A+       + +      + APE+L ++ +G  VD+WS+G+I +ILL G  PF  E++ ++F+++ KG   F P+ W +IS +AKD ++++L VDP++R+TA +A  H W+      L   DL   L+  +  +A+RK ++ + ++V+A RL  +L   +     Y   +KLG GAY  V +            G+   P+     +AVK + K  L ++E   +  E  IM +L+HP+++    F++D  K  Y+ +EL  GGEL +RIVQK  YNE+EAR+V   LLRAV Y HS+G+VHRDLKPENLLL S  D  SI++ADFGFA  +    L+   CGTP YVAPE+LK   YG  VD+WSVGVI ++LL G PPF+D +Q  +F KIK G Y+F   +W  IS +AKDLI ++L VDPA+R++A +A +H +L      L+  N++A LE+++++N  RKLR+A+ +++A+  F
Sbjct:  174 NIKVADFGFAKVADNSKGLHTQCGTPGYVAPEILKRQPYGKEVDVWSVGVICYILLGGYPPFQDENQVRLFMKIKKGTFTFHPKYWDAISTDAKDLISRMLVVDPQQRITAAQALKHPWIRTPAAVLEKRDLDSTLDQLRYFNARRKFKSAINSVVLANRL-SNLVRERDIKDHYDLAEKLGTGAYSVVHK------------GISKRPQTKGQEVAVKVVTKRDLPERERLALTTEMEIMLKLSHPHILKAIDFFQDSAK-LYMVVELARGGELFERIVQKVTYNESEARNVVRCLLRAVAYCHSRGVVHRDLKPENLLLVSPDDDYSIKVADFGFADHVAPDKLLKAQCGTPGYVAPEILKREAYGKEVDIWSVGVICYILLGGYPPFYDDNQTKLFLKIKKGAYKFHPQYWDPISEEAKDLIARMLVVDPAQRISADQALQHRYLQMAPEALATTNMNANLERMRLYNARRKLRSAIHSIIAVKAF 648          
BLAST of Ec-28_001440.1 vs. uniprot
Match: A0A6H5KBX7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBX7_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 5.540e-114
Identity = 187/257 (72.76%), Postives = 199/257 (77.43%), Query Frame = 3
Query: 1713 QKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGA-------------------------------------SVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRLEAVQCPTG 2372
            ++TYYNEAEARDVCVPLL AVEY+HSQGIVHRDLKPENLLLASA+DATSI+LADFGFAASIRDGDL+NGCGTP+YVAPEMLKNVPYG                                       VDMWS+GVIIFVLL GR PFHD+DQ  MFRKIK G Y F  +    IS DAKDLI KLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLE LKVFNT RKLRAAVKTVVAMS+FAK LEAVQCP+G
Sbjct:   18 KQTYYNEAEARDVCVPLLGAVEYVHSQGIVHRDLKPENLLLASANDATSIKLADFGFAASIRDGDLLNGCGTPYYVAPEMLKNVPYGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMWSIGVIIFVLLVGRLPFHDKDQLEMFRKIKRGAYAFNDE----ISDDAKDLIAKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEDLKVFNTKRKLRAAVKTVVAMSIFAKYLEAVQCPSG 270          
The following BLAST results are available for this feature:
BLAST of Ec-28_001440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGW1_ECTSI0.000e+0100.00Ca2+/calmodulin-dependent protein kinase II n=1 Ta... [more]
D8LEF0_ECTSI3.240e-23149.46Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
A0A6H5K409_9PHAE5.250e-22676.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8I6_9PHAE1.610e-20847.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSJ7_9STRA4.380e-14437.61Phosphorylase kinase n=1 Tax=Tribonema minus TaxID... [more]
D8LE50_ECTSI2.020e-14338.58Phosphorylase kinase n=1 Tax=Ectocarpus siliculosu... [more]
A0A8K1C336_PYTOL1.570e-13135.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9YB44_9STRA2.120e-12034.11Phosphorylase kinase n=1 Tax=Achlya hypogyna TaxID... [more]
A0A835YM32_9STRA2.660e-11440.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KBX7_9PHAE5.540e-11472.76Protein kinase domain-containing protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1363085..1375150 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1419.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LGW1
Length2667
KEGG koko:K08794
KEGG Pathwayko04921,ko04925,map04921,map04925
Hectar predicted targeting categoryother localisation
Gene idEc-28_001440.1
EggNOG free text desc.calmodulin-dependent protein kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759,KOG0033@1,KOG0033@2759
EC2.7.11.17
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001440Ec-28_001440Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 1363085..1375150 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001440.1.15Ec-28_001440.1.15Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1363085..1363435 -
Ec-28_001440.1.14Ec-28_001440.1.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1364036..1364215 -
Ec-28_001440.1.13Ec-28_001440.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1364981..1365139 -
Ec-28_001440.1.12Ec-28_001440.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1365909..1366083 -
Ec-28_001440.1.11Ec-28_001440.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1366489..1366571 -
Ec-28_001440.1.10Ec-28_001440.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1368125..1368259 -
Ec-28_001440.1.9Ec-28_001440.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1368999..1369235 -
Ec-28_001440.1.8Ec-28_001440.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1369675..1369854 -
Ec-28_001440.1.7Ec-28_001440.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1370197..1370355 -
Ec-28_001440.1.6Ec-28_001440.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1370876..1371244 -
Ec-28_001440.1.5Ec-28_001440.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1371714..1371794 -
Ec-28_001440.1.4Ec-28_001440.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1372063..1372194 -
Ec-28_001440.1.3Ec-28_001440.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1373063..1373235 -
Ec-28_001440.1.2Ec-28_001440.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1374377..1374452 -
Ec-28_001440.1.1Ec-28_001440.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1374974..1375150 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0014403UTR:Ec-28_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 1363085..1363375 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001440.1CDS:Ec-28_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 1363376..1363435 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0014405UTR:Ec-28_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 1374989..1375150 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001440.1Ec-28_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 1363376..1374988 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_001440.1 ID=Ec-28_001440.1|Name=Ec-28_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=738bp
MMQKLPSLPRMVRNDSKAAPKCIGAGDFGKDFHRNFIVGSKKIAQGTTAN
LYEGKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNI
VKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDA
VSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSTSPP
KVTSTSREEIRGNMKVTTTTTTTITTVVTTTPVVAPARVSSDSLKITDFG
KARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGN
NPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRM
TAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAK
RLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAP
RYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYF
YLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRD
LKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKN
VPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFW
QGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARL
EQLKVFNTVRKLRAAVKTVVAMSMFAKRLEAVQCPTG*
back to top

spliced messenger RNA

>Ec-28_001440.1 ID=Ec-28_001440.1|Name=Ec-28_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2667bp|location=Sequence derived from alignment at chr_28:1363085..1375150- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GGCGGCGGCGGCGGCGGCGGCGAAAAAACAGAGAGACTAGGGGAGGCTCA
GGATACCCTCCCCCCTTGGTACTGAGCTAGCTGTTGCTGGCTTCTTTAGG
CTGCGGCTGCGTTGCAAGCACGTCGTCGTCCAGCCAGCTGGCGAAAGGGG
GATACACGAGAAATGATGCAGAAACTGCCCTCGCTACCCCGGATGGTCCG
CAACGACTCCAAGGCCGCCCCCAAATGCATTGGAGCCGGGGACTTCGGGA
AAGACTTCCATCGAAACTTCATCGTGGGGAGCAAGAAAATCGCGCAAGGG
ACGACCGCCAACTTATACGAGGGCAAAATGAAGTGCAAGAGAGAAACAGA
CTGCCGCCGCTACGCGATTAACAAAGTCGGGGGGTTTCAGCTTCGTAAGC
TCCAAAAGGAGGCCATGAGTCGAGAGATGGGTATCCTGAAGATTCTGGAA
CATCCGAACATCGTAAAGGTATTTCACCTCTACCGCACCCCCTGGACGTA
CTACATGGTGCTCGAGTACCTGAGCGGAGGCGAGCTCCTCGACGGGATCG
TCCGAAAGGACAGCTACATCGAGAGGGAAGCGAGAGACGTGTGCAAGGTG
CTGGTGGATGCCGTCAGCCACCTCCACGACAAGTCCATCGTTCATCGAGA
CCTGAAGCCGGGAAGCATCCTGCTCGCCAACCCGGAGGACCAGGAGGGAG
ACCAAGGCACCGCCAGCACCTCTACTACCACCCCCCCCGCAAAAGTCTCC
ACCTCCCCCCCGAAGGTCACCAGCACTAGCAGGGAGGAGATCAGGGGCAA
CATGAAGGTAACAACGACAACTACGACGACGATCACCACCGTCGTCACGA
CCACCCCAGTCGTCGCCCCCGCCAGGGTATCCAGCGACAGCCTCAAGATC
ACCGACTTCGGTAAGGCGCGCAGTGTTCGCGAAGGACCCATCAAGTCCGC
CTGGGTCAAGAGTGAGTTCAGCGCGCCGGAGATGCTGATGCAAGAGGCCC
ACGGCCCGCCGGTCGACATGTGGAGCCTGGGCTTGATCACCCACATCCTC
CTTAGCGGGAACAACCCGTTCTTCCACGAGGATGAGCAGCAGATGTTCTT
GAGGGTAGCGAAGGGGGCCTGCGAGTTCAAGCCGGAGATTTGGAGGAGCA
TCTCGCCGGAGGCCAAGGACTTCGTTGCAAAGCTGCTGAAGGTGGACCCG
GAGAAGCGGATGACGGCGCAGGAGGCTAAGAGCCACGCCTGGCTCCACGC
TGCCGGAGAAAGCTTGGGGGCCGGCGACCTCCGTGGCAACCTGGAGGGGT
ACAAGGTATCGGACGCCAAGAGGAAGCTGCGGGCGTTGATGAAGACGTTG
GTGGTGGCCAAGCGTTTGGTGGACAGCCTGCAGCCCACCAAGCCGGACCT
TTCGAAGTACGCCTGCGTGAAGAAGCTGGGCGAGGGGGCCTACGGGCAGG
TCTTCCAGGCCACCCGCATCGCCAGCGGCGACGCCAGTGCTGCCGGCGTA
GGGGCGGCCCCCCGCTATATCGCCGTAAAACGCATACAGAAGGAGGGCCT
GACCAAGAAAGAGACAGGGGACATCATCAACGAGGCGAATATCATGCGCG
AGTTAAACCACCCAAACGTGGTAAGCATCTACGGCTTCTACGAGGATGAC
CCCAAGTATTTCTACTTGGCTCTCGAGCTCATGGAGGGCGGAGAGCTGCT
GGACCGCATCGTCCAGAAGACGTACTACAACGAAGCGGAGGCGAGAGACG
TCTGCGTGCCGCTCCTGCGTGCCGTCGAGTACCTCCACAGCCAAGGCATC
GTACACCGCGATCTGAAGCCCGAGAACTTGCTGCTGGCCTCCGCCAGCGA
TGCCACCAGCATTAGGCTGGCCGACTTCGGGTTCGCCGCTAGCATCCGTG
ACGGCGACCTCATCAACGGGTGCGGGACACCTTTCTACGTCGCGCCGGAG
ATGCTCAAGAACGTCCCCTACGGCGCGTCGGTGGACATGTGGAGCGTCGG
CGTGATCATCTTCGTCCTGCTGGCCGGCAGGCCGCCGTTCCACGACAGGG
ACCAGAAGTTAATGTTCCGGAAAATCAAGAGCGGGGAATACCAGTTCAAG
GGAGATTTCTGGCAGGGGATTTCTGGCGATGCTAAGGACCTCATCACCAA
GCTACTGACCGTCGATCCCGCCAAGCGATTGACGGCGAGCGAGGCCTGCA
AACACCCCTGGCTCACCACCGACGCCCCGAACCTGTCCTGCCACAACCTG
AGCGCGCGCCTGGAGCAGCTCAAGGTTTTCAATACCGTGCGGAAGCTGCG
TGCTGCCGTCAAGACGGTGGTGGCGATGAGCATGTTTGCCAAGAGACTCG
AAGCAGTGCAATGCCCGACTGGGTGAGGGTCCCCATCCAGCGGGGCCACG
TCCTCCTAAACTCGATCGCGCTAGAACCCCCCCCCCCGTGTGTGTACGCC
GTTTCGAGTCGCCGCTGCGCGAGCGAGCGACGAGACTCGCCGCCGGTCTG
TTTGAAACGAACGGTCCGGCGCGGGGGGTTGTATCGACGATGGTGACGTA
AATATTTGCGCAGCGGTCGGGGGGGTCCTGGGGCCAAAAGTGCGGGAGGT
CTCCCCAACACTTTCGGCCCCCAGTTTGTTGGGGGGGGGGGGGAGCAGGA
GGATGGTTAGGGCATTT
back to top

protein sequence of Ec-28_001440.1

>Ec-28_001440.1 ID=Ec-28_001440.1|Name=Ec-28_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=738bp
MMQKLPSLPRMVRNDSKAAPKCIGAGDFGKDFHRNFIVGSKKIAQGTTAN
LYEGKMKCKRETDCRRYAINKVGGFQLRKLQKEAMSREMGILKILEHPNI
VKVFHLYRTPWTYYMVLEYLSGGELLDGIVRKDSYIEREARDVCKVLVDA
VSHLHDKSIVHRDLKPGSILLANPEDQEGDQGTASTSTTTPPAKVSTSPP
KVTSTSREEIRGNMKVTTTTTTTITTVVTTTPVVAPARVSSDSLKITDFG
KARSVREGPIKSAWVKSEFSAPEMLMQEAHGPPVDMWSLGLITHILLSGN
NPFFHEDEQQMFLRVAKGACEFKPEIWRSISPEAKDFVAKLLKVDPEKRM
TAQEAKSHAWLHAAGESLGAGDLRGNLEGYKVSDAKRKLRALMKTLVVAK
RLVDSLQPTKPDLSKYACVKKLGEGAYGQVFQATRIASGDASAAGVGAAP
RYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYF
YLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRD
LKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKN
VPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFW
QGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARL
EQLKVFNTVRKLRAAVKTVVAMSMFAKRLEAVQCPTG*
back to top

mRNA from alignment at chr_28:1363085..1375150-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_001440.1 ID=Ec-28_001440.1|Name=Ec-28_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12066bp|location=Sequence derived from alignment at chr_28:1363085..1375150- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GGCGGCGGCGGCGGCGGCGGCGAAAAAACAGAGAGACTAGGGGAGGCTCA GGATACCCTCCCCCCTTGGTACTGAGCTAGCTGTTGCTGGCTTCTTTAGG CTGCGGCTGCGTTGCAAGCACGTCGTCGTCCAGCCAGCTGGCGAAAGGGG GATACACGAGAAATGATGCAGAAACTGGTGAGAGACGGAGACACAGGCAC AACAAATGAGGGGGGCGTGAGCTTCGTTAGCCGTAAACAAGCAGCTGCAA TCCCCCGGGTCTGGTGAAAACCCGGCGTGCTCCGTCTCGGCTTTATTCCC GGCTTTGTAGGGGTGCGAGGTCATCGGTCTAACGACTACGGCGATGAGTA CAAGCCCTACCCAAGCCCAGAGTTTTCAGAGTTTTCCCACCTACGCAGGG CCGGGCTTCAGCGTGCGGCGAAGAGCTCTTTGGGTGAAGGCCTTGCTACA GCACCGTCCGGTTCCTCTTTGCATGCATGGTATTGTATAAAGTTCTCATT TCGGGGGAACAACCATGCCCGGGGGGCGACCGACAGCATTGTGGTATCAG AGACCCGAAAATCGCGTACCCTCGCGAGTTAGGTGTGGCTGTCTGCGTAC TGCCACGAACCTGCCATTACTCTGTGGTACTTTCTGCTGACGCCCCCCTC CCCCGCCCGCGCGCGACGACGCTCTCCCTCTATGGATTGCGCACGCAGCC CTCGCTACCCCGGATGGTCCGCAACGACTCCAAGGCCGCCCCCAAATGCA TTGGAGCCGGGGACTTCGGGAAAGGTGATCTCCGCCCCTGCCCTTGTTGG TGCATACAGTAGCACATGGTTATCGGGCGGTGATGCACACCACTGCCGCA TGCTAACTACAATCTATGTTGCGCGAGCAGCATTTTCCTTCTCCCCCTAC CCCCCACCCCCGGTTTTTGTCATCGGGGTTGGGTTTTCGTCGCTTGGCAG CGATGTTATTAAACAAGCCGATCACTTCGTGAACTCGGCAACCAGGTTAC CGCTTTTTTTTTGTTGCCATTGGGGGGTTTTTCGCGGTAACCATGAATGG TGGTCGAGTAGATTACGTTGTGCGGGGTCGAGAACCCTCACTGCGCGCAA GGGGGATATTCGCACCACGTTGTGTTAACATGGCCAAGCACTCTCGAGGC AGTTACACAGTGCTTACAACTGTCTCTGGAAGTTAACGCACCAGAAAAGA AATTAAGTCATACGCAGCTGTCATCCGTATGCATGGAGTATAAGCACGAG ATGCCGAACACCCTTAGCAGGATGCAGCGCACCCTCCATGCGACTCGCCG AATACCTCACGGCGCTTCGCGTTTGGTGATTTGTTAGTCTGGTCCGGTGA AAGCCCGGCGTGCTCCGTCCCAGCTTTGTAGGGATGCGAGGTCAACGGCA TGCACGACTATGAGTACACCCCCCCCCTCCCCCCCACTTTTATTTTTGGC CGCTAGAGCACCTTCTCTATCTCAATCTTACGCCAACCTTTTGCGCCGCC TACCCACCACCTTTGGCACCAACAACGCCGACAAACATGTGCTTTCCTGT TATTGCGGGGCGGCCGTTTTTTCCCGCCCTTTTCCGTTTGCCCTGGCGGC CGACCGGTATGTCTGCCTGCCCTCCGTGGCTTCGCATGCGCCGCCTTTCC TCTGCAGAGCTGTCTGCCACGTGATCTCATACCCCTGTAGATACGTTCAG CCGTGTGTCACCATTCTCTTCTTCTCATTTCCCTCTCACCCTTAATTCCC CCTCACCTTCTCCCTGTCCTGTCTCCCTCCCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCCCTCCCTTCCTCTCTTTCATTCTCTCTCTTGCGCGCATGTCGCCG CCGTACAACCGCCAGACTTCCATCGAAACTTCATCGTGGGGAGCAAGAAA ATCGCGCAAGGGACGACCGCCAACTTATACGAGGGCAAAATGAAGTGCAA GAGAGAAACAGACTGCCGCCGCTACGCGATTAACAAAGTCGGGGGGTTTC AGCTTCGTAAGCTCCAAAAGGAGGCCATGAGTCGAGAGGTGAGTGAAATG TCTCGAGTTCGAAAACAGTATTTTCCCGTTTACATACACGTCTCTTTTGC TACTTAGCCGTCGTTGGTAGGTTTGTTGCTCTTGCTGCTGTTGCTCTGAT TTGTCGTTGCTTGTTGTTGCTGTCTCTTGCTGCTGTGGTTCTTCTGGTGC GTACTTTCGATATGGCTGCTACTGCTGCTGCTTTTTGCTGCTCTGCCGGA TGTTTGAGGTTGCCATCGAAGTCTCTATGGTCGTCATCAACGAACTAGTT CTCCGCTGCTCTGTACATTGGCACTCCGTTTTTGGTGCCGTTAGGACATG GCACGACTCGTTTCATGTCGATCGTCCCTTCCGACTGAGTTTTTCTTCTT CCGTGAGGCGGCTCTCATGGTCTCTTGGCAAACATCGACTCTGTAGCCGG GGAAGACGTTTTTGTTTTTGCCCTTACTGCATGGAAGCGCGTTTTGCCGC TTGCTGCACCTGCCCAGATGACAAAATCAGCAGATTACCGTATATGACAC AAGATAACACACCCCCTGGACCAAATCTTCAAAGCTCAATTACGCCACGA CGAAGAGGATGCATTAATGAAACATAACATTTTCGGAGAGTCTCGACGAG ACAGCTTCAACCCCACCGTTTTCGGCGCTGTGGATCTTTCTGCTGTTGAG AAATAGAGATTTTAAAATCGGTCCAGAGGGTGTGTTATCTTGTGTCCTTT ACGGTGTGTCGTACGCGGAACGCGGATGAGGTAAATGCCTATTTGCACAC GCTTTTTCAGTCACCCATTCGTGTCAGCCAAAGTGGGCTTCCGGGCGTCG ATCCCGCCACCTCAAAGAATGCACTGTTTATTGTCGCTTGAAACCGTCGA CCACAGATGGGTATCCTGAAGATTCTGGAACATCCGAACATCGTAAAGGT ATTTCACCTCTACCGCACCCCCTGGACGTACTACATGGTGCTCGAGTACC TGAGCGGAGGCGAGCTCCTCGACGGGATCGTCCGAAAGGTCTTGTGTATG TTGTTGCTGCAGCTGCTGCTGTTGCTGACGTTTTACCGTGATGCATGTAA TGCTTTAGTCCCATGAAGCAAGTTAGTTCAGTTGGTCAAGTGAGGCCATG TACATCAAAGACAAGCTGTGAAAGAGCGCAAGCAACGTATTGTCCAAGCG GTTGGCGCGTACATGAGTCCCCTATTGCCTGTCAGCGTGGCCAAGCATGT GACCCGTCCCTTCCTGCAAAACCCCGTCCCTCCACGGATATCCAACGACG TTCCAGGACAGCTACATCGAGAGGGAAGCGAGAGACGTGTGCAAGGTGCT GGTGGATGCCGTCAGCCACCTCCACGACAAGTCCATCGTGAGTCTCATAT CGTCGCACAGCGGCTCTCGTCCTCGCCTCGGGGGAACTAAGAATACACGT AGATGAGTCCGATCGGAGGGATTTATCCTTGTGGCGTTGGGCTACTGCTG CTGTACAGAAGGACGAAAATGGGCATGTTGGTTCATGTTTTTGCCGCGAA TGGATGCTGCAGCCGTTGTTGTTGTTTAGTCTACTGCCGTGGAAACACAA AAGGCTGACTGTTGATCAACGTCGGCCCTTGTGTAGGGCTTCGTCCTCAG TATCGAGAATGAACGGATCTCCCCACGTTTATCCTCGCCGGTGCCAGGCT TAGCTGGTGGTAATTTCGCAAGCTGTGTCTTGCGCCAAGGGGCCAACAGC AGTTGCTTGTCAGGCCAGAAGCCCCCTGCCCCCCCAACACAGGCTGGGCC ACCTACCCTGCCCCGGCGTATTCCGTCCTAAAACCTCGGGTTTGTTTTTT TGACAGGTTCATCGAGACCTGAAGCCGGGAAGCATCCTGCTCGCCAACCC GGAGGACCAGGAGGGAGACCAAGGCACCGCCAGCACCTCTACTACCACCC CCCCCGCAAAAGTCTCCACCTCCCCCCCGAAGGTCACCAGCACTAGCAGG GAGGAGATCAGGGGCAACATGAAGGTAACAACGACAACTACGACGACGAT CACCACCGTCGTCACGACCACCCCAGTCGTCGCCCCCGCCAGGGTATCCA GCGACAGCCTCAAGATCACCGACTTCGGTAAGGCGCGCAGTGTTCGCGAA GGACCCATCAAGTCCGCCTGGGTCAAGAGTGAGTTCAGCGCGCCGGAGAT GCTGATGCAAGAGGCCCACGGCCCGGTAAGAGGGCCGGATTTGTTTCTGG ACGGGTCGCGCGGAAAGGAGCTAACCGTAGGAGGTTTTGCCGGAGGTAGA ACACCGGCTGGTTCGAAACTTGATTGTTCCCTCTGCAGTACTGCTGTAGA AGCAAGACTGCGATGGCGGCGTTCGAAAACGTACCGCGTCGAGAGCATTC CGGAAACGAACGTCATTGAAAAGCTTTGTGGTCCTCTCAGCCGAGAGCTC TAAGAAACCGATCCAGGGGGGCTGGCACCTCATGCAACCCACACACTATT TTACCACGTGCTGTTCCCCCCCCAGGGTGGTGAGATGAAGGCCAGCATCC CCCTCATTCGGCAGACCCGCACAAAACGGCCTCCTTTGTATTTTGGGAAC CCGGTCCCACGAGACCGGTTTGTCTTGGATGGGTTTCCGAACAGTTCTGG GCAGCCCGCTATCTGTTCATACCGCCGCGCCCACGCCCGAACCGTAATTA CCGGTGCCCTCCACCCCCTCTTGCTGAATCCACGGTTGTGTTTAGCCGGT CGACATGTGGAGCCTGGGCTTGATCACCCACATCCTCCTTAGCGGGAACA ACCCGTTCTTCCACGAGGATGAGCAGCAGATGTTCTTGAGGGTAGCGAAG GGGGCCTGCGAGTTCAAGCCGGAGATTTGGAGGAGCATCTCGCCGGAGGC CAAGGTGTGCGGTAGGCAGACGATGGCGTGTAAGGTAGGGGAGGTAGGCT TTTGCCTAGGACTGCCAGGCAGCCCAAGCCGTAGGTCTGGGCACAATTTC TAAAAACAGCTTTTCGCCCCGCAAGACCTTCGCCAGGACGTGTAGCCAGG CGACGGTGTTAGGGTTTTGCCAGGGGGTGAAGTGAAGGCAGGCAGAAGTA TGCGAGTAGAAGGCGCTGCTTCGAGTCGAAGGATAAGCAGGAGGAGACTT TTCACTGCTCCGGCCGAGCTGGCGGGGGTGTCGCTGTCACAGCCCCCATG CGCGGATACTCACTCACAAGGGTTCCCCATCCTACACCCGTCCCAGGACT TCGTTGCAAAGCTGCTGAAGGTGGACCCGGAGAAGCGGATGACGGCGCAG GAGGCTAAGAGCCACGCCTGGCTCCACGCTGCCGGAGAAAGCTTGGGGGC CGGCGACCTCCGTGGCAACCTGGAGGGGTACAAGGTATCGGACGCCAAGA GGAAGCTGCGGGCGTTGATGAAGACGGTGAGACACACGCACACCCCTACC ATAGGATAGGGAAAACCTTTGTTGAGCCGCCGCTTTTGGCAAAGTAGGAA GGAACCATTGGCCATCCGTGATCGGTGGGAATAATGCTCCAGTGACGCGT GGTCAAGGATCTATCAGCTAGGGCATGCGAAACACGAGTACGCCCCCGCC CCCCTAGCACAACCCTCTGTTTTGTTTGTGTCCGGGGTGCGAGGTTGACC CCCTACGTACATGTACCAGGCAGGGCAGAGGGACATCGTTTTGTTCTGCT TGTGTTTTGTTCGCTGGTAAAGCGTTCGTTCGATGTGTTTGGTGTTGATC TCGCACCCAGCCCGGGTCTGGTAGAGTAGCCTACAGTAGCAATAGCAGCA GCAACGACGAAGACAACACCAACAACAACAACACCAACAACAAAAAACAA CGACAACGACAACAGTTGGTGGTGGCCAAGCGTTTGGTGGACAGCCTGCA GCCCACCAAGCCGGACCTTTCGAAGTACGCCTGCGTGAAGAAGCTGGGCG AGGGGGCCTACGGGCAGGTCTTCCAGGCCACCCGCATCGCCAGCGGCGAC GCCAGTGCTGCCGGCGTAGGGGCGGCCCCCCGCTATATCGCCGTAAAACG CATACAGAAGGAGGGCCTGACCAAGAAAGAGACAGGGGACATCATCAACG AGGTGGGTGGGCGTGGCTTGGGAGGAAGAGGGGGGCAACGGTAGGCGGGG GGTGGGAAACCCTGTTGTTTTGTTGTTGTAGGCCGGTATGTAGACGGAGG TGACGACTACTGACGGGAGGGGGGTAGACGGAAACGGTCCACTTTTTTAT GTGTGGCCGGCCAGAGGGGTAGGTTGTTGCACCGCGCTTCCCAACCTGCC AAGGGTTGGGGCGAGGGGCGGAGATCGACCTTCAAGGCATGTATTTTGCT TACTATGCTGCCTGCGAGCTCTCGCCTTTGTCGGTTGGAATCAGGCCCCG AGATGCGGAATTACTTGCCCACGTCGGGCTGCAACCGCCCCCCCCCCCCC CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCCCCCCCCCCCCCCCCCCCCCCCCAGGTTGTAGTCCGTGCCCACCCT ACCCAAAAACCTGACCGCTGGCTACCAGGGTGGCTTCCGGTTTCAGATGT TCGACGTGCGTAGTTTGACCACGCACGTGTGTGGTATTCACTTGCGGTGA ACCGACCACAATGGACCACGTGCCAGCGAGGGGTTGCTTGCTTCCAATTG GCCGGCCCCTAGGTTTGGCTTCGACTTGATAATTGCGCCCTTTCATGTCC TTTTTCGATGACCGGCGGCATTTTCGGGCGGAATCATGACAACGCCCCCT CTCTCCCCCTCCCCCCCCATGCCCATCCCCTCGTCACGAAGGCGAATATC ATGCGCGAGTTAAACCACCCAAACGTGGTAAGCATCTACGGCTTCTACGA GGATGACCCCAAGTATTTCTACTTGGCTCTCGAGCTCATGGAGGGCGGAG AGCTGCTGGACCGCATCGTCCAGAAGGTATGTATCGGATTTTTTCATCGT GACGCATCCGGAATGGTGTACCGCAAGGTATATTCGGACCGACGTCCACA ACAAACGGGATGACAACAACGATCAGCTACAGACTGGACATAAGTTTTTA ATGTTTAGTTCGTTTATGGTTCGCGGGGCTAGAACACGCCAGCTGTGTGG ACTATCGAGCTTGGCAAATGTCAACACTGGTAGCGCTGGCAGCCAGCTGC TGTGGGCTTGTTCTGCTACTACTTTATTTCATCTTGCATCACCCTCTTGA TAGCACTGCTGTGCTCTCATGAGCCCACTCCAGAGGGATCCCTTGTATAC ATCCATGTGTTGGTTGGCCGTCCACCTTTGCGGGCAAACGGCCTGCCTGA CCTTGACCACCCTGAAAACAGGCCGTGAAGATTTTTTTTTTTTGTTCTTG TTCTTAAGAGGGCAAAAGATTAGCCTTCAGAAGTACAAGGGATACATCGG GAGTCGGCTCATGAGAGCAAAGTGCAATGCAAGATGAGTGCAATGCACGA TGAGAACAAAAACAGGGAGCAGGACCAGCCCAGCTGCTGTGGGCTGCGAC GGAGACGTTGGTGACGTTTCCCAGGCTTAAATAGCTGACACAGCTGACAT GTATTTGAACCGAAGAGCCCAGCAAGCTTCAACGAACCAAGAAAGAAACT TTGCAAGCCTTCATGCAGCAGTCTTTGTGTGATTTTCGGAACGCGGTCAA AGGAAGAAATTACCGCACGGTGAACTATCGCGAACGTTGCTGCCCAGCTG TCGTGTCGGCGTGTGCTTGTACCGGGGGGGGGGGGGCGGAAGTGCTCTGT CTAGGCTGAAAAAAAAAGAAAAAAAAAGAGAGAAAAAAAGAGAGAGAGAG AAAAAAAGAAAGAGAAAAAAAGAAAGAGAAAAAAAGAGAAAAAGGTGGTC AACACCGTCGGTAGGACATTGCAATCCCTTGTGAAACAACCAAAAACCCA CAGCTTAATCCACGAGGAGGGAAAACGGCCACATGTACCGCGGAGGGTGA GGTCGAAGAAGGTTGCCAGATCTAACCCAGTCCCCGATGCAAGGTCCATG GGGTTGGTTTGCAGTGCGAGGTCACTTTGTAGCAGCGGGTGTGCGTTCAT GTGTACGTCCCCGTCTACCTCCTGTGTGCTGTATGTAGCATGTAATTGCA TCCCCCGCCCGCCAGCACGCATCATCATCTTGCCCCCCCCCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTT TTTCCCCCCCCCCCCCCCCCGCGCGCGCGCCGTATCTGGAACGAACGATC GGTCATCGGTCATCGGTCCTGTGGGGACAATGCTCCGTCTTCTCGAGCAT GCGTGGCCAATGGCCTAACCGCTGAAGCACGGACAACATGAGAGTTCGCC TCCCCCCCACTGAAGCATGCAAAACATGAGTCCGCCCCCCCCGCCCCTCC CCCCGCCGTGGCCAAACAACGCATCGCAGACGTACTACAACGAAGCGGAG GCGAGAGACGTCTGCGTGCCGCTCCTGCGTGCCGTCGAGTACCTCCACAG CCAAGGCATCGTGTGAGGCAGACAAAAGACATACATGTGCAACGCGGCGG TTCGTTCGTTCGGCACTCGCTCGATGCGTTGCCCGTTTGTACCCCGGCCT TTTTTGAGTTTTTGTCCCACCGTCGGTGAGACAGAAATATAAGTTAGCGA GACCAATGGCGTGTAGGGCCGGCCAGGGGCGAGGACACCGAAAAACACGA AAGCGAAGGGACATATTTTTTTAGAGCAGCGACGATTGGGGGAGGGGAAG CGCAGCCCTCTTGCTGCACCATTTGACGACCCCGATTCCCCGCTTGCCTC AGCGCTATCCCGTACCGCGATCTGAAGCGCAGCTAGCTCTCTTGTCGGCA GCTGCAGCACCCTCAACGACCTCGATTCCCCGCTTGCCCATTACGCTGCG GCCGCCCGTTGCCGCAGACACCGCGATCTGAAGCCCGAGAACTTGCTGCT GGCCTCCGCCAGCGATGCCACCAGCATTAGGCTGGCCGACTTCGGGTTCG CCGCTAGCATCCGTGACGGCGACCTCATCAACGGGTGCGGGACACCTTTC TACGTCGCGCCGGAGATGCTCAAGAACGTCCCCTACGGCGCGGTGAGTCG TCGTCGTCGTCGTATTCGAAAGCCGGGTGTCGCTGTTGTTGCTGCTGTTG CTGCTGCTGCTGCTAAAGCTGCTAAAGCTGAAGCTGCTAAAGCTGAAGCT GCTAAAGCTGAAGCTGCTAAAGCTGAAGCTGCTGAAGCTGCTAAAGCTGC TGCTGCTGCTGCGGTGGCCAAAGAAATAGTGCGGCGTATTTTTTGCCCAT GGGGTAGGGTTGTGGTTTGCCGTTGCTGCTGCTGCTGCTGCTCCCTGCCT GTGCGTCGTCGCCGCCGCTGCTGCTGCTCGCTATCCTTGTTGCCCCCTTT TGCCTCTCTGGACAAAGAGAGTCGCCTCGTTCTCCTCCCGGGTCTCGGGC GTCCCACCACCACCAGCAGTATGAATACTTACCAAGGACTGCTTTCGTCG ATCACACCGCACGCTATGCGTGTAATTGCCGCTTCTTTTCTGGGCGGGTG TTCGGGCACCAGCGCTCGGACACCTACCATCCTGGACTCCCGTAGTCCCT TCTCTCTCAGAAGTGCTTGGATTCACGTGAAAGCAACTACGCCCCCCGCC GGCATCACCCACGCTCCGCGTCCTTACCTCGAACGCTTGCTATACTTAAG TTTTTTGCTGTTGGCCACCTGTCGTTGCGGTTGCAGCACAAACTAATTTT ATCTCCGCCGAGCTGTGAACGTAGAACGTACGTATATCCTCTGCCGAACC GATTTCATTCCCCGTGCCCCCCTCCTGAAAAATCGCTATTATTCCTGCCT GTCCGCCACAGTCGGTGGACATGTGGAGCGTCGGCGTGATCATCTTCGTC CTGCTGGCCGGCAGGCCGCCGTTCCACGACAGGGACCAGAAGTTAATGTT CCGGAAAATCAAGAGCGGGGAATACCAGTTCAAGGGAGATTTCTGGCAGG GGATTTCTGGCGATGCTAAGGTGAGCGAGGAGGTGCTATTTCTCTTTGTT TTTTTTCGCGCGCGTTGCCGCCGCCGCCACCGCCGGGGTGTGAGCGGCAC GTTCAGCTGGATATTATTTTAGCAACAAAAAAAGAGGGAGTGCGCGGGAA AGAGCAGGTTAGAGGGCGAAGCTCAGCTGTTGTGGAGTCCCCGAAAAGAG TGACTTGGGTACAGCTTGAGCTCGCTGCCTTAGCTGGTTGTAGGATCGCT GGGCGCTCTGCCTGGACCCGGGGGGGCGTTCGGTGCTGTTGTGCCGTTGT TTTCGATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGT TTCTCGCATTAGCTGTATAGTCCACAAAAATGGGGAGCCCGTGGTCCCAA AAACCCGGCACATACGACGCCGCGGGGAAACAACACAAAAATAGGGTACA AACCACTCGGAAGAGAAAACAAAATGATAAAAAGAAAAGAACAGCTACCG CACCGGTCGAGAAAAGAGCCCAGAAGACCGATCAAAATAAAATTGTTGGT TGTTGGTTCCTCCCACGAAGAAGCGGCGTTTGATTCTGAAGCCTCAAGCA GGCTTGCGTTTGTGCAATCGTTACGCGTAGTGCACAAGTGTTTCCTTGTC TGTGCGCGTTTGTGCGCAACTCGTGGTGCTGCACTCGCGGCCTTTTTACC TGCGTTGCTCTCTCTCTCGCTGCTTCCGTCTATGACCCCCTCTCGCTCTC TCTTTGTTCTCTTCCCCTCCTTCTCTTGCCTGCAGGACCTCATCACCAAG CTACTGACCGTCGATCCCGCCAAGCGATTGACGGCGAGCGAGGCCTGCAA ACACCCCTGGCTCACCACCGACGCCCCGAACCTGTCCTGCCACAACCTGA GCGCGCGCCTGGAGCAGCTCAAGGTTTTCAATACCGTGCGGAAGCTGCGT GCTGCCGTCAAGACGGTGAGAAAAACTCCGGTTGGACTCCGCGAATCCGT CGGGCCGGTGGCGGCGCCGTTCGTTTCAAGGAGTTCGTGAAAACTTAAGG AGGGGCGTGTTGGGGGGTATCGGTCGCACATCGGCGACCGAAACCATGAC AGCAGCAGTACACACATAAGCCTGGTGGATCTGCCACCGCGTGCGGGTTG GAAAAAGTTGATGGGAATGTGTTGTGTCCCCCTGCTGGGGTACGTGAGAG TTGTTGAATTCTCTCACAGCGCTAGGTCTCGCTCGCCGTCCCGCGAGGTC ATGGGTGTGCCCAGCTACTGCTGCTGTTGTTGCTATCTCTAGATCGCGTC GCTTTACCACCTAGCTGACTCTTTGGTCCCCGCTGTCAGGCCGCGACCGC GACCAATCGCCTGTCTGTCAGCAGCAGGTCGCAGTGTTTGCTCAATAGCA CATGCCACCGAACAAGCTAACCCCCCACCGCAACGATTGGCCATCGGTGA TCGGTCTTGTGGGAGGAGCAGTGCTCCGTCCTCTCGAAGGCATGCAAAAC ATGAGCACCCCCATCCCCCTTTGTTTTCGGTCGCGGTGTCGCTTGCCATT TTTTTTTTTCTTCAGGTGGTGGCGATGAGCATGTTTGCCAAGAGACTCGA AGCAGTGCAATGCCCGACTGGGTGAGGGTCCCCATCCAGCGGGGCCACGT CCTCCTAAACTCGATCGCGCTAGAACCCCCCCCCCCGTGTGTGTACGCCG TTTCGAGTCGCCGCTGCGCGAGCGAGCGACGAGACTCGCCGCCGGTCTGT TTGAAACGAACGGTCCGGCGCGGGGGGTTGTATCGACGATGGTGACGTAA ATATTTGCGCAGCGGTCGGGGGGGTCCTGGGGCCAAAAGTGCGGGAGGTC TCCCCAACACTTTCGGCCCCCAGTTTGTTGGGGGGGGGGGGGAGCAGGAG GATGGTTAGGGCATTT
back to top

Coding sequence (CDS) from alignment at chr_28:1363085..1375150-

>Ec-28_001440.1 ID=Ec-28_001440.1|Name=Ec-28_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2214bp|location=Sequence derived from alignment at chr_28:1363085..1375150- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGCAGAAACTGCCCTCGCTACCCCGGATGGTCCGCAACGACTCCAA
GGCCGCCCCCAAATGCATTGGAGCCGGGGACTTCGGGAAAGACTTCCATC
GAAACTTCATCGTGGGGAGCAAGAAAATCGCGCAAGGGACGACCGCCAAC
TTATACGAGGGCAAAATGAAGTGCAAGAGAGAAACAGACTGCCGCCGCTA
CGCGATTAACAAAGTCGGGGGGTTTCAGCTTCGTAAGCTCCAAAAGGAGG
CCATGAGTCGAGAGATGGGTATCCTGAAGATTCTGGAACATCCGAACATC
GTAAAGGTATTTCACCTCTACCGCACCCCCTGGACGTACTACATGGTGCT
CGAGTACCTGAGCGGAGGCGAGCTCCTCGACGGGATCGTCCGAAAGGACA
GCTACATCGAGAGGGAAGCGAGAGACGTGTGCAAGGTGCTGGTGGATGCC
GTCAGCCACCTCCACGACAAGTCCATCGTTCATCGAGACCTGAAGCCGGG
AAGCATCCTGCTCGCCAACCCGGAGGACCAGGAGGGAGACCAAGGCACCG
CCAGCACCTCTACTACCACCCCCCCCGCAAAAGTCTCCACCTCCCCCCCG
AAGGTCACCAGCACTAGCAGGGAGGAGATCAGGGGCAACATGAAGGTAAC
AACGACAACTACGACGACGATCACCACCGTCGTCACGACCACCCCAGTCG
TCGCCCCCGCCAGGGTATCCAGCGACAGCCTCAAGATCACCGACTTCGGT
AAGGCGCGCAGTGTTCGCGAAGGACCCATCAAGTCCGCCTGGGTCAAGAG
TGAGTTCAGCGCGCCGGAGATGCTGATGCAAGAGGCCCACGGCCCGCCGG
TCGACATGTGGAGCCTGGGCTTGATCACCCACATCCTCCTTAGCGGGAAC
AACCCGTTCTTCCACGAGGATGAGCAGCAGATGTTCTTGAGGGTAGCGAA
GGGGGCCTGCGAGTTCAAGCCGGAGATTTGGAGGAGCATCTCGCCGGAGG
CCAAGGACTTCGTTGCAAAGCTGCTGAAGGTGGACCCGGAGAAGCGGATG
ACGGCGCAGGAGGCTAAGAGCCACGCCTGGCTCCACGCTGCCGGAGAAAG
CTTGGGGGCCGGCGACCTCCGTGGCAACCTGGAGGGGTACAAGGTATCGG
ACGCCAAGAGGAAGCTGCGGGCGTTGATGAAGACGTTGGTGGTGGCCAAG
CGTTTGGTGGACAGCCTGCAGCCCACCAAGCCGGACCTTTCGAAGTACGC
CTGCGTGAAGAAGCTGGGCGAGGGGGCCTACGGGCAGGTCTTCCAGGCCA
CCCGCATCGCCAGCGGCGACGCCAGTGCTGCCGGCGTAGGGGCGGCCCCC
CGCTATATCGCCGTAAAACGCATACAGAAGGAGGGCCTGACCAAGAAAGA
GACAGGGGACATCATCAACGAGGCGAATATCATGCGCGAGTTAAACCACC
CAAACGTGGTAAGCATCTACGGCTTCTACGAGGATGACCCCAAGTATTTC
TACTTGGCTCTCGAGCTCATGGAGGGCGGAGAGCTGCTGGACCGCATCGT
CCAGAAGACGTACTACAACGAAGCGGAGGCGAGAGACGTCTGCGTGCCGC
TCCTGCGTGCCGTCGAGTACCTCCACAGCCAAGGCATCGTACACCGCGAT
CTGAAGCCCGAGAACTTGCTGCTGGCCTCCGCCAGCGATGCCACCAGCAT
TAGGCTGGCCGACTTCGGGTTCGCCGCTAGCATCCGTGACGGCGACCTCA
TCAACGGGTGCGGGACACCTTTCTACGTCGCGCCGGAGATGCTCAAGAAC
GTCCCCTACGGCGCGTCGGTGGACATGTGGAGCGTCGGCGTGATCATCTT
CGTCCTGCTGGCCGGCAGGCCGCCGTTCCACGACAGGGACCAGAAGTTAA
TGTTCCGGAAAATCAAGAGCGGGGAATACCAGTTCAAGGGAGATTTCTGG
CAGGGGATTTCTGGCGATGCTAAGGACCTCATCACCAAGCTACTGACCGT
CGATCCCGCCAAGCGATTGACGGCGAGCGAGGCCTGCAAACACCCCTGGC
TCACCACCGACGCCCCGAACCTGTCCTGCCACAACCTGAGCGCGCGCCTG
GAGCAGCTCAAGGTTTTCAATACCGTGCGGAAGCTGCGTGCTGCCGTCAA
GACGGTGGTGGCGATGAGCATGTTTGCCAAGAGACTCGAAGCAGTGCAAT
GCCCGACTGGGTGA
back to top
Synonyms
The feature 'Ec-28_001440.1' has the following synonyms
Synonym
Esi0181_0058
Esi_0181_0058