Ec-28_000850.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000850.1
Unique NameEc-28_000850.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length458
Homology
BLAST of Ec-28_000850.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI)

HSP 1 Score: 917 bits (2371), Expect = 0.000e+0
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 1
Query:    1 MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIYQ 1371
            MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIYQ
Sbjct:    1 MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIYQ 457          
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A835YKN4_9STRA (CLU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.210e-62
Identity = 109/201 (54.23%), Postives = 136/201 (67.66%), Query Frame = 1
Query:  259 GMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGV 858
            G+ RV++ D GDNWN  +QEA +LP  T+M+  YK   L  VY DF   AV YGRTIISE+FLH Y++S++P+ +GG AGGKK+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELRG S Y H GV GL   PMC+LDYKGFRM+  A LPLG  +L  G++DGG  V+    + D   A   +    R  + P    G 
Sbjct:   19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRGHSYYAHAGVAGLHFSPMCILDYKGFRMVCAAQLPLGAATLISGSSDGGINVVG---VGDAEVARVLEEAAARLRLRPHPCRGT 216          
BLAST of Ec-28_000850.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.930e-53
Identity = 104/192 (54.17%), Postives = 125/192 (65.10%), Query Frame = 1
Query:  295 NWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKP-KRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQE 864
            NWN+ +Q AL LP  T      K   +  V  DF   AVTYG+TIISEYFL    KS+KP + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL   + GL     CL+DYKGFRM AQA LP+   +L+ G++D GRTV ND   L K+    AK L LR H     WV  +E
Sbjct:   10 NWNELFQSALDLPEDTPDQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTH-----WVNDKE 196          
BLAST of Ec-28_000850.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 5.020e-52
Identity = 108/204 (52.94%), Postives = 137/204 (67.16%), Query Frame = 1
Query:  223 KAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 831
            ++W+   EL+F         + G NWN+ +Q AL LP +T      K   L  V  DF  TAVTYG+TIISEYFL    KS++ K LGG+AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL     CL+DYKGFRM AQA LP+ + SL+ G+++GG+TV N+   L K+   AAK L LR H
Sbjct:  224 RSWERFRELVFPDDMEQAYRETG-NWNELFQSALDLPEETPDQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTH 426          
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A835ZAL9_9STRA (CLU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.930e-40
Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 1
Query:  361 KRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPL-GETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIG 837
            K ++L A+  DF+  AVTYGRTIISEYFL E  KSV P  +GG+AGG+K+L RGILFKLADGS+GPY GSDEAA KA  ++L+GA   +   + GL      L+DYKGFRM AQA LPL    +L+ G+ D G TV++    L  +  + A  L L+AH G
Sbjct:   19 KYQALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGAVHLVKCSIPGLFCSLQALIDYKGFRMHAQAQLPLCSRATLRCGSCDAGATVVDGDGALRHKLRLVAAQLNLKAHRG 179          
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A7S4DG52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG52_HETAK)

HSP 1 Score: 134 bits (336), Expect = 5.780e-34
Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  289 GDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELR 609
            GD+WN+R+Q A+SLP  T  +   K   L +V  DF+ TA TY +T+ISEYFL E++KSVK  + GG+AGG+KY WRGILFKLADG  GPY GSD AAAKA GH+LR
Sbjct:   37 GDDWNERFQHAISLPESTDEEKLLKYTLLTSVNRDFIATAETYAKTVISEYFLPEHLKSVKSGQFGGIAGGRKYCWRGILFKLADGQCGPYEGSDAAAAKAMGHDLR 143          
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A7R9UF47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.220e-31
Identity = 69/140 (49.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  298 WNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVG-LCIPPMCLLDYKGFRMLAQAHLPL 714
            WN+R+Q  L LP+ +  +  ++   L A Y+DFV TA TYG  +ISE FL+E +K++  + + GLAGG+KY +RGI FKLA G + PYGG   AA+KA GHEL+GA+ Y    V  L IP   L+DY+G+R+LAQ  LP+
Sbjct:   30 WNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGATHYSRCNVTELNIPMHVLIDYRGYRLLAQTKLPI 168          
BLAST of Ec-28_000850.1 vs. uniprot
Match: L8HJ57_ACACA (Tetratricopeptide repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJ57_ACACA)

HSP 1 Score: 135 bits (341), Expect = 1.710e-30
Identity = 71/166 (42.77%), Postives = 109/166 (65.66%), Query Frame = 1
Query:  340 TKMDINYK-RRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 831
            T +D  Y   R+L  +  DF++++ +YGR IISE F+ ++MK++KP  +GG+ GG KY+   ILFK A  S G YG SD AA+K AGHEL+G   Y + G+  LC+P M L+DY+GFR+LA + LP+ ++++  G+ND G T+  +   L  +  +AA+ L ++ H
Sbjct:  276 TPLDERYNTNRALIHLAQDFIYSSCSYGRIIISEAFVPDHMKTIKPTAMGGIVGGDKYIVNNILFKFAVDSHGLYG-SDYAASKVAGHELKGLLAYFNLGIRDLCLPLMALIDYRGFRLLAMSILPIKKSTIVYGSNDYGHTMHAENKKLGAKMRIAARKLNIKPH 440          
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A2P6N2S8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2S8_9EUKA)

HSP 1 Score: 135 bits (339), Expect = 3.920e-30
Identity = 72/179 (40.22%), Postives = 110/179 (61.45%), Query Frame = 1
Query:  298 WNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPK-RLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 831
            WND +Q+ L+LP  T+ +  +K   L ++  DFVH A T+G+ IISE +LH   +++ P   +GG+AGG+KY++ GILFK A   +  YGG D  A KAA HEL+  + Y     G+ +P M L++Y+G+R++A + +P+   +L  G+ DGG TVL      ++   MA K L L+ H
Sbjct:  171 WNDEFQKILALPENTEDEKLHKYSELSSLNKDFVHIAKTFGKIIISERYLHAKHRTINPTTEVGGVAGGEKYVYHGILFKFAIDWRNLYGG-DHNAMKAANHELQAVTRYYECE-GISVPLMTLIEYRGYRLVAMSWVPITSRTLVYGSQDGGYTVLASDEKCNRLMQMAGKRLNLKGH 347          
BLAST of Ec-28_000850.1 vs. uniprot
Match: F0ZU77_DICPU (Clu domain-containing protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZU77_DICPU)

HSP 1 Score: 132 bits (332), Expect = 2.780e-29
Identity = 76/182 (41.76%), Postives = 111/182 (60.99%), Query Frame = 1
Query:  298 WNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQ--GPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHI 834
            WN  +Q  L +      D   K   L ++  DFV+ A TYGR IISE FL   +K++KP  +GG+AGG+KY+ +GILFK A  ++  G YG SDE A K A HEL G + +L+ G+ GL +P M  +DY+GFR++A + LP+ + SL  G+ D G+TV     I +     A+K + L++H+
Sbjct:  257 WNSEFQRLLEMD-----DCLEKFERLSSLEHDFVYAAETYGRIIISENFLSNELKTIKPVSVGGIAGGEKYIVQGILFKFALENETFGLYG-SDENAMKTAAHELNGCTSFLNCGIKGLHVPLMAYIDYRGFRLMAMSLLPISKKSLIYGSCDAGQTVHTSNNIFNHLFGNASKIVNLKSHM 432          
The following BLAST results are available for this feature:
BLAST of Ec-28_000850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9G7_ECTSI0.000e+0100.00Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YKN4_9STRA1.210e-6254.23CLU domain-containing protein n=1 Tax=Tribonema mi... [more]
D8LF64_ECTSI1.930e-5354.17Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G5G9_ECTSI5.020e-5252.94Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZAL9_9STRA1.930e-4052.80CLU domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S4DG52_HETAK5.780e-3460.75Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9UF47_9STRA1.220e-3149.29Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
L8HJ57_ACACA1.710e-3042.77Tetratricopeptide repeat domain containing protein... [more]
A0A2P6N2S8_9EUKA3.920e-3040.22Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
F0ZU77_DICPU2.780e-2941.76Clu domain-containing protein (Fragment) n=1 Tax=D... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:816857..825878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score919.5
Seed ortholog evalue6.3e-265
Seed eggNOG ortholog2880.D7G9G7
Length1374
Hectar predicted targeting categoryother localisation
Gene idEc-28_000850.1
EggNOG free text desc.Clustered mitochondria
EggNOG OGs2DZMV@1,2S753@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000850Ec-28_000850Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 814452..827601 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000850.1.14Ec-28_000850.1.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 816857..816986 -
Ec-28_000850.1.13Ec-28_000850.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 817447..817563 -
Ec-28_000850.1.12Ec-28_000850.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 817928..818031 -
Ec-28_000850.1.11Ec-28_000850.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 818630..818716 -
Ec-28_000850.1.10Ec-28_000850.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 819314..819415 -
Ec-28_000850.1.9Ec-28_000850.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 820043..820177 -
Ec-28_000850.1.8Ec-28_000850.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 820663..820751 -
Ec-28_000850.1.7Ec-28_000850.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 821943..822082 -
Ec-28_000850.1.6Ec-28_000850.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 822923..823030 -
Ec-28_000850.1.5Ec-28_000850.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 823554..823639 -
Ec-28_000850.1.4Ec-28_000850.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 824017..824067 -
Ec-28_000850.1.3Ec-28_000850.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 824500..824616 -
Ec-28_000850.1.2Ec-28_000850.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 825359..825439 -
Ec-28_000850.1.1Ec-28_000850.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 825852..825878 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000850.1CDS:Ec-28_000850.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 816857..816986 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000850.1Ec-28_000850.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 816857..825878 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=458bp
MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAG
LHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNW
NDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLH
EYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGH
ELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDG
GRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRG
GGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQF
LNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEI
LLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVV
TPMAIYQ*
back to top

spliced messenger RNA

>Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1374bp|location=Sequence derived from alignment at chr_28:816857..825878- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACCTGGATGGGAAGGAAGTGAACGTCGACCATGCAGCGGCGGTGGC
TCTCCAGCGGGCTTGGCGGAAGAGGAGCGCGTACGTGTTTGTCAAGGACC
TCAAGCAGGAAAAGCTGTGCCGTGATATGCGAAAAGAGATGCGGGCCGGT
CTCCACGTGGACTGCGAGGCGTGCTCGTCGGCGGGGAAGAAGTCGGCGGA
TATCAAATCGCGTAACCAGAAGAAGGCGTGGAAGGATACCGACGAGCTGC
TGTTCAAGGGAATGGCCAGGGTGCAGATGAGCGACAGAGGCGACAACTGG
AACGACCGATGGCAGGAAGCGCTGAGCCTGCCTAACAAGACCAAGATGGA
CATCAACTACAAACGGAGGAGCCTGGACGCTGTGTACTCGGACTTCGTCC
ACACGGCCGTCACGTACGGGAGGACGATTATCTCCGAGTACTTCCTCCAT
GAGTACATGAAGAGCGTCAAGCCCAAGCGGCTCGGGGGGCTTGCCGGGGG
CAAGAAGTACCTGTGGAGGGGCATTCTGTTCAAGCTGGCGGACGGCAGCC
AGGGTCCCTACGGCGGCAGCGATGAGGCCGCCGCCAAGGCGGCCGGTCAC
GAGCTCCGAGGGGCGTCGGAGTACCTCCACACCGGGGTAGGGCTGTGCAT
CCCGCCCATGTGCCTCTTGGACTACAAGGGGTTCCGGATGCTTGCGCAGG
CACACCTCCCCCTGGGCGAGACGAGCCTGAAGATGGGCACTAACGACGGG
GGCCGGACGGTCCTGAACGATTGCCCTATCCTCGACAAGCGCACCGCGAT
GGCGGCCAAGGCGCTCGGGCTGAGGGCCCACATCGGACCCAGAGACTGGG
TCGGTGTACAGGAAGAAGAGAAACGTGGGGGGCCAGATACTCCACGCGGC
GGCGGACGTGGAAGGGCACGAGGGCATCGATTCCAGGTGGAGGTGGTGGT
GCGGACGCTGAAGCTGGTGCTGAGGGAGTTCCAACGGCGCTGGATGAAGT
CGGAGCAGAGCTCTTCCGAACGGGGCATGCACTTGTTGGTGACACAGTTC
CTGAACCTTGTGACAGGCCACCACGAGCGCTCCCACCTCTTCTGGCGGGA
GAACGTCACCACAGGCGTCTGTCAAAGGTTCGGCACTGTTGCTCTCACCG
AGTCAGAGCGCGCGGGACTGTGGACAGTCTGCTCGGATCGGCCGGAAATC
CTCCTCACCATCGTCAAGGAGCTGGTGAAGGTCACCGGCGTCAGGTTTAA
GGAGAGCGTGAACCAGAAGTTGCGAAGCAGGAAGGCCAAATCTGTCGTGG
TGGGCTTCGAGTTCCACCTTGGGGACATCCGCGACATCGAGGCGGTCGTG
ACTCCCATGGCCATCTACCAGTGA
back to top

protein sequence of Ec-28_000850.1

>Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=458bp
MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAG
LHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNW
NDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLH
EYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGH
ELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDG
GRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRG
GGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQF
LNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEI
LLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVV
TPMAIYQ*
back to top

mRNA from alignment at chr_28:816857..825878-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9022bp|location=Sequence derived from alignment at chr_28:816857..825878- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAACCTGGATGGGAAGGAAGTGAACGTGAGTACCACCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCGCCCCCGAGAATGTGGTA CGGTATTCCAGCAGCGTGGCAAGAACAGTTCAGCGCCGCGGCAGATATTT GCTGTCGCAGTTATCTGAATAGTCGAATTTTCATTCAGATAATTTTACGA TGGTCGTCACACAGCCGTGTGTGTAATGTGAAGACAACAACAACAACAAC AACAACAACAACAACAACAACCACAACGAAACACGACAGGTCGACCATGC AGCGGCGGTGGCTCTCCAGCGGGCTTGGCGGAAGAGGAGCGCGTACGTGT TTGTCAAGGACCTCAAGCAGGTGGGTAGCAGGTCAGCCAGCCAGGCACGC TCCTGCTTCCAATCTCACGTGCTGTGCACTAAGGCCGCGCACGCCGTATC GCAACAGTAGGCTTTTCGTTCCCCCCCCCGCTCAGGAGTTTGCGCCGAAA TCAATGAATGTTCTTCACCACACACCGAATCGCACAGCTTTTGGTTTCGC CCCCAATAAGTTGCACCGAAGAGTTAATTGATGATCTACGTTGCGGGTTT TTCGAGGACTCCTCGTTTGGTGGCTAGCTAGGTGAGGCAGACACGACGAA CGAAGAAAGACATCTTGTTGATCGTTTTTAGCTGGGATGCCACGGTCTGC CGAGTTGGTCCGTTGTGCATGTAAGGGTGTCGTAGCGCTTTTCCCTTTGA GGTGGGGCTTGATCAAGAAAAGCCGTCCGAGCGAGTACTATCTGCTCTGT GTCTTCGAGCAGCACAGCATTGTGTAGCGTAGCTCCCAGGTGTTCACGCC TTTGGAATAGGCCCATGGAAGGAAGTGAAAACCCGTAAGAGCTTGTACAG AACCAACAAACAGGAGTTTGCAAACACCACGGAAAACACTATTACAACAC AGACAAATTCATGAACAACACGAGTTTTGCAACGACCGCAACCCACAGCA TGGATAAAATCATCATCAACAACAGGAGTTTGCAATGACCGCAACCCACA ACAACGACAACATCATCATCATCAACAACAACGACGACGTTGAAATATTA ACCCCCCCGCAGGAAAAGCTGTGCCGTGATATGCGAAAAGAGATGCGGGC CGGTCTCCACGTGGACTGCGAGGCGTGCTCGTCGGCGGGGAAGAAGTCGG CGGATATCAAATCGCGTAACCAGAAGAAGGTGGGGCAGAGAGGGAGAGAC ACAGAGAGGGAGAGGGAGAGGGAGAGAGAGGAAGAGGAGAGCGTTATCAG AGAGAGGGGGAGGGGCGTACTCTTATGTTTTGCATGCCTTAGCGGTTAGA CCATTGACCGAGAGGGGGGGGGGACAGAGGGACAGAGGGACAGAGAGAGT TTTCGTGGTGTGTGTTACGTTTGTGGATTCTTTTACGTGTTGTTGTGTAT TTTCGCGGGTTTGTGTCTTTTTTCATATTTGGCGCTTTTCACCACCGTCT TTTCTTTTGCTCTTGTTTTCGCTCTCTCGTTTTCTTGCAGGCCTTCAAGG ATGCCATCAAGCTCTGACATTTTGTTGGTGGGGTAGTTTTTCAGGTTTTT TATTTATTTATTTATTGTTTTTTTCTGTTGTTTTTCGGCCTGTCGTTTTT TTTTCTCGCAGGCGTGGAAGGATACCGACGAGCTGCTGTTCAAGGGAATG GCCAGGGTGCAGGTGTGTGCGGGTGTCGTGGGTCGTCTCGATCTCGGGCG AATGTCGACATACAAAATGTTTTAATGTGTTTTTGTGGTGTGTTTTATTT TCGCCTGTATCTTGGAACCGAGCGCGCGGTTCAGTCTGAAGGACGGATGT ATTTATGCGGACAAATTCAGATGGTCGATCAAGGGCGATCCTAGTTTTTT CATGAATAGCGATTACCGTATACAACACAAGATAACGCACCCCCTGGACC GATTTTCAAAGCTCGAGTACGCCACGACGCAGAACATGCATGAACGAAGC GACACATTTTCGGGAAGCGCTCGACGAGACGGCTTCAACGCCGCCGTTTT TTTTGTTCTTCCGCTTATTTTTTCTTTTCGTTTTTAAAGATGAGCGACAG AGGCGACAACTGGAACGACCGATGGCAGGAAGCGCTGAGCCTGCCTAACA AGACCAAGATGGACATCAACTACAAGTGAGGGTCTACTGAACAGCAATCA ATTGAGACAGCAGACATTTCAACCGACGGACACACCTTCATTCGACGGAC AAACAAAACATTCACCCGACGAAACAGGCAGATGCCAGTGCAGCCGCCGG CAGCGATGTGACCCTATTTAGGGGCGCCCTCCAATGGTCCGAACAGGCTT AGTGTACAGCCCGTCGCTATGCATGTATGTGTGTGTTTCTTCACCCAGTC GCTGAGGTTGTGGGCAAGAAAAATCACAGATTAATCTCAACCTCTCGGGC GGCCGGCCGTGTCGCAGCAGTAGACAGCGAACGATGCATGCTGTATGTAG TGCCCGGAGGTAATTGCGTATCGTGATTGTTTTGCCATGCGGAGGGAGTG GTGTTCCCTAGGGTTAAGCAGCTGCAACGTGTGTGTAGGGGCATGCCCTC CCTTATGTCGCATACAGTACTATCTCGGCGGGCGCGCTTCACGAAAAATG TTTTTTTCTCAACCCTGATGGGACTTTGCCGTTTGCTGCTTGTGTCAGAC GGAGGAGCCTGGACGCTGTGTACTCGGACTTCGTCCACACGGCCGTCACG TACGGGAGGACGATTATCTCCGAGTACTTCCTCCATGAGTACATGAAGAG CGTCAAGTGAGCAAGCAGACATGATTTCCCGCCGACCCTTGTTGTCGATT TCAAACCTGCAGTCATGGTCCTGGCTCTTCTCGTTTGCGATTTCTTGGCC TCCAAATTGTCGTGTATTTAGACATATTCCTGATTTCTTTGGTGTTTGCG AATTGCAGAGATGACGCTGACTCTTGTGGTTATTTTTTCGATTTAAAGGC ATGATCCTCTGGCCCTCGTATCGTTTTCGGTTTACGGACATGATCTTGAC GCTACCATGTTCGAGTTTACGCGCATGATCCTGACTCTTGTTGTTTTCGA TTTCTTGACCTCCAGGTTGTCGTGTTGGTGAATTCTGACTCGGGCCGATG ACCGTATTTCCGTGCCTCTTGAGTAGGTCTTTTGGGTTTGTGTTGGCTGG CACGGTATCTACATAAAAACGAGACCTCTACGCGTAACAATAGCTGCGCT GCGTGCCAGCCTGCTGCCACCGGGCGATTCGAGTGATACCTTCTTCTACA ATAATCCCTCTAAACAATATGCTACTGCTGTACCTTCTTCTGCACTCTGG ACGGAAAAATCTGCCGGTCCTTCTCTTGCCTTCTAATGCTGTGCCCTCTT GTACCCTCTGAACGAGGCTACTGTCCTTTGGTCTGCTTCTAAAACGGAAG CTACTGCTGTGCCTTCTTCTACGCTCTGAACGAGGCTACCACTGTATACT TTGTTCTGCTTCTAAAGGGAAGTTTCTGATTTACTTTTATCTTCTTCTGC CTTCTGAACGAAAAGCTACTCCTGCTGTGTGAACCTTAACCTTCGTCCGT CCTCGACCTCCCTTCCCTTCCCTTCCCTTCCCTCCTCTTGCATCAGGCCC AAGCGGCTCGGGGGGCTTGCCGGGGGCAAGAAGTACCTGTGGAGGGGCAT TCTGTTCAAGCTGGCGGACGGCAGCCAGGGTCCCTACGGCGGCAGCGATG AGGCCGCCGCCAAGGCGGCCGGTCACGAGCTCCGAGGTGCGCGGGGCCTG CTTGTTCTCGTTGTAGGGTTAGCCTACCCGACCGTTGTTGGGCGGGTCCG GGTTCGTTGGTTCGAGTCCCTCGACAACCCAACGGCGTTTTTTCTTTGGT TGTACTTGTACTTGAAGAAGAAGACAAAAATGTGGTGGCACTTAGAGCAT GTGGATGCGAGTCGATCGAGAGTCGAAAATGGCAAACGCAACACGGCGTT TCTCTTGGTAAAGTTGCGTGGTGCTTGTAGCGTGTCGAGGCGAGTCGAGG CGAAAATGACGACGTGTGTATGTCTCGGGTACTGCAAATAGCGGTACGGC TTCGCACGTTTTATTGCCCAACACCAGCGCCACACCGCAGTGGGGGGTAG GGCAGGGCAGAGATACCTCGGCTGCGTGTTGTGTATGGGAAACGGCCCCA TCACCTTTGGAAACGACAGGCCCGGGGTAATTCCCAAGCAAGCGCGTACC TTCCCGGCTACTGTTTTTTTTATATTTGAAGATCTACATACGTGTGTTTT TTTAATAAATATTTTTTATTTTTTATTTCTGGGTTTTTTGGAGGACACGT AAAAAAATAACGCTTGGTTCCAAAATATTACCTCAGCAGTTTTTTGTTGT TGTTGCGGTTCTCTCCCTTCGCCCGTTCTTGTTCATCCGCCGAATGCACT TTTTCTCTGTCACGCGGCCCCGCCGATCCTACCCCCTCCCCCCACCCCCC CCACCCCCTCCTCGATGATAGTTCCAGCGGCGTGTGCGTAAGGTTGACTC ATGTAGAATAACCGCTGCAGGACCCTGGGTTTCTTGAGCCCCGCCCATGA CGGACCCAGAGAGCGAAATAAGAGTGCGGAAGGGTTTGTCGATCCATACA GCAGTGCCATGGCACTGTAGCATGCAACGCAGCCAGCAGTGCATGTGGTG GCCTGTTTTACTCGGAAATAGCGCGCGAAGAGCGCTCTCGAACGGTGTGC TATTTTCCCCCAGAAAGCAGGAAGAATTTCGCTGCTCCCTGTGCGGTTAG TCTGACTCGCGACTGGCATGCGAACCATCACCTGACCACTCATATTTTCG ATATGCACGAGACTAATTTTAATTTTTCAACAATAACTTAGCGCCCTCAA CCCCCTCATCCCCCCCCCTTACCGCCGTCGCCTCTGCGGGCGGGGCGCCC GCTTGTGATATTCCTCTTGGCCACCAGGGGCGTCGGAGTACCTCCACACC GGGGTAGGGCTGTGCATCCCGCCCATGTGCCTCTTGGACTACAAGGGGTT CCGGATGCTTGCGCAGGTGTATTTTTGTACTTTTGCTCTAGCGTTATTGT TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTG CTGCTGCCTGTTGTTGTGTCTCCCCAGGGCAGGCATCGTCGCAGTAGCTG CAGCAGCCCCCTCATAACCCTAGCCCCCTTGGGCAAGAGCCGCACCCCTT TTGATAGGTAGAACTGTTTTTTAAGTATGGTTTTCTCGTGCTACCCCCCT CCCCCTCGACCGCAGCGATCCCTTGACGACCCCCGCCCCCCCTGAGATGA AACCATTTTAGCGCTCTGGTCCTTGACTACCTACGACCAATATCCGCCCC CGTGACCCCCCCCCCCTCGTGTGCGTGTTCCCGAGCGGTCTAACTCTTCC GAGTGCCGTTGTTTCGAATGTGGTTCTGGGGGCCCGACAAACCGGCGCGC TGATCCCCCTCCCCCCCCACCCCCTCCCGACAACGTCTGCGTTGTTTTCA GGCACACCTCCCCCTGGGCGAGACGAGCCTGAAGATGGGCACTAACGACG GGGGCCGGACGGTCCTGAACGATTGCCCTATCCTCGACAAGCGCACCGCG ATGGCGGCCAAGGCGCTCGGGCTGAGGGCCCACATCGTGGGCGGGAGGCA GGCGTTGGTGGCCTACAGGCAAGCCAGGCCCTTTTTTTTTTTTGGAGTAC AGTATACACAGCATTTTCATTCGCTGATGTCGTCGCATGTGCTGTGTCTT TCGACTCAGCGCTTGAGCAGCGTACGTACGCATCATGTGTGCTTCCCGAA AAGAAAAAATATATGTATATATATGTTTTGTTTCACCCACTGCTCACTTT GAAGGTCACACTGACGCCATGTACGCCTCTGAAACACTTGGCAACACATC ACGTTTTTGTGCTGGCCGAACGCAGAACAAAGCATATGTATATACATGTT TGTTTCACCCACTGCTCACTTTGAGGGTCACACTGACGCCATGTACGCCT CTAGAACACTTGGCAGCACATCACGTTTTTGTGCTGGCCGAACGCAGAAC AAATCGCTCCCCCCACTGCTCTCTCACTTTGACATTCTCTTCTTGAAGTA TGCCGTGGTTTTGTATGGTTGCAATTGATCCGTACCGGTGCCGCCGCCTC CACATGTGCTACCGCCGCTGCTACCTCCGCCGAGCATCTAGACTTCAAAT AGCTGTTCCCTATGCATATGCAACGTGTGACCTTGTGCTGTACCGTGAAC TCGATCCGCGCAGGGACCCAGAGACTGGGTCGGTGTACAGGAAGAAGAGA AACGTGGGGGGCCAGATACTCCACGCGGCGGCGGACGTGGAAGGGCACGA GGGCATCGATTCCAGGTATGTAGCAATTGTTTTCTACCTCGTGCATTATG GTATGGTACAGGCTGGTGGCTAGTTTGTTCTGTGGTGTCTCCGTGTGGGA CAGTTTTCTGTTCCGATTTTTTTTTGTTCCTCACGGTGGCTCTCTGGCCG ACTGGCTGGCTGGCTGGCTATTTCCCAAAAAATCGTGTCTCTGCTTAGGA CGATTTCATCCGTGTTTGACGGTTTCCGGTTTGGTTTGCCTGGGCTTCCC TCTCTCCCAGAGTGAGCTCTATCTACGATTTTGTTCTGGTCACCAGGAAC GAGACACAAGTCCTTGATGCTGAATGGAAGAGACACATGGAGCAACACCG ACAACGGCATTGCGGAGGAAGGAACAAGCTTTCTCTCTCCCCCCCCCCTA TCACTTAGTGCTGACACGCCTGGTTTGTTCTACCGCTCCTCGGAGTACCC CCCCCCCCCCCCCCCAGCCAAAAAAGGTTGAAGCGGGGGGCAGATNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGG GGGGGGGGGCAGGTGGAGGTGGTGGTGCGGACGCTGAAGCTGGTGCTGAG GGAGTTCCAACGGCGCTGGATGAAGTCGGAGCAGAGCTCTTCCGAACGGG TGAGAGTGCGAACGGCGGAGCTACATGCACTACTTGTGGTGCTACTGCTG CTGCAAGCTGTTGCTGCGGCTACGGCTGCTGCGGTAGAAGTCCACATGGT GACAGTGACGTTCTGGTGCTGCTTACAAGCTGCTGGTGCTGGTGTTGATG TTGCTGCTGCTGCGGAAGACCCGCGGCTAGTGGCGACGCCGATTCGTGCG ATTCGAGCTGTCGATGGCAGCAGGGGTAGGAGATAGGTTCCGGCACGTTT GGCTTGTAACCCGTTCCCCTGCAAATCGTTCAAGAACCATCCGACTATTA AATGGTATGCTTCAGTCTCTGGCGCGTTATTCTCTTGATGGCTGGACGGG TACGAACATGGAGGTATTGTGTCTTGGCCTCGTGATTTCAACAGGATAAA CGTGCACAAGATGAACAACAACAGCGGGCATATCGTCGTCAACAACAGCA GAACAGCGAGCGTCGCGATCGTTTTCCGATGACACGAGGAGACCGTTAAC AACCCCAAACTAACCCGTTGCCCCCTCTACCACAACGCTTGCTGCTGCAT CCCGCCCGTCTGCCGCGCAATGTTCGGAACGACGCCCCTTCCCCCAGGGC ATGCACTTGTTGGTGACACAGTTCCTGAACCTTGTGACAGGCCACCACGA GCGCTCCCACCTCTTCTGGCGGGAGAACGTCACCACAGGCGTCTGTCAAA GGCAAGCAGGCCGTGCCCGGTGTCGTTGGTTTTTGCTCTTTTTGCTGCTG CAGCTGCTACAGCTGCTGCTGCTGCTGCTGCTGCTGCTACTGATGATGAT GATGATGATGATGATGATGACGTAAAAATTAGCAGACCGTGCCCTCTGCT GTTGATGATCTGGTAAAGGTACTGAGCGGAGACCGGAACGGTTTTTGATA TGAATACAACAACAACAACAGCAGCAGCAACAACAACAACAACAACAACA ACAACAAGTTCTCGTCTTGTCTCTTCTCTGGCATCCCCTGCCTCACGAAA GCCATCCTGTGCTCGTTCGCGTGCGCGTGCGCGTGTGGTCTGTCTTGCCT CCCGCCGCTTTTCAGGTTCGGCACTGTTGCTCTCACCGAGTCAGAGCGCG CGGGACTGTGGACAGTCTGCTCGGATCGGCCGGAAATCCTCCTCACCATC GTCAAGGAGCTGGTGAAGGTCACCGGCGTCAGGTGTGGTGAACCCCCCTC CCCCTCCCCGAACCCTCGTCGGCCTTTGTCGGCCTCCGTTTTCATTTTGC CCGATCCCCCCTGAAGCTATCGTGAGTACCCCCCCCCCTCCCCCTGAAGC TATCAATCACACTTGGTGCCCCGCGTGTTTGAACGTGGCGGTGACTGGTG TGTGTATGTATTGCGTGATGGTGTTTGTCCGCCCGCAAGGTTGACGTATA TGGAGCACGAAAGTTTCATACGAAAACGAATGGCGTGCGTGCGCGCGACG CCGCGATGCAACGGCGGCGACATCATATGACCACAGAAACTCCTTTTGCT TTCTCCGTACCGTACCGCGTCGGACTACACGCTTTTGTGTGCGCGTCCTA GGCGTACCAGTGATGCTTTCGCGATGCATGTTTTAACGACTGCACGGCTG CGGGTGATTTTGTTTGCGACGCTTCTGCGAACACCAACACAGGTTTAAGG AGAGCGTGAACCAGAAGTTGCGAAGCAGGAAGGCCAAATCTGTCGTGGTG GGCTTCGAGTTCCACCTTGGGGACATCCGCGACATCGAGGCGGTCGTGAC TCCCATGGCCATCTACCAGTGA
back to top

Coding sequence (CDS) from alignment at chr_28:816857..825878-

>Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1374bp|location=Sequence derived from alignment at chr_28:816857..825878- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAACCTGGATGGGAAGGAAGTGAACGTCGACCATGCAGCGGCGGTGGC
TCTCCAGCGGGCTTGGCGGAAGAGGAGCGCGTACGTGTTTGTCAAGGACC
TCAAGCAGGAAAAGCTGTGCCGTGATATGCGAAAAGAGATGCGGGCCGGT
CTCCACGTGGACTGCGAGGCGTGCTCGTCGGCGGGGAAGAAGTCGGCGGA
TATCAAATCGCGTAACCAGAAGAAGGCGTGGAAGGATACCGACGAGCTGC
TGTTCAAGGGAATGGCCAGGGTGCAGATGAGCGACAGAGGCGACAACTGG
AACGACCGATGGCAGGAAGCGCTGAGCCTGCCTAACAAGACCAAGATGGA
CATCAACTACAAACGGAGGAGCCTGGACGCTGTGTACTCGGACTTCGTCC
ACACGGCCGTCACGTACGGGAGGACGATTATCTCCGAGTACTTCCTCCAT
GAGTACATGAAGAGCGTCAAGCCCAAGCGGCTCGGGGGGCTTGCCGGGGG
CAAGAAGTACCTGTGGAGGGGCATTCTGTTCAAGCTGGCGGACGGCAGCC
AGGGTCCCTACGGCGGCAGCGATGAGGCCGCCGCCAAGGCGGCCGGTCAC
GAGCTCCGAGGGGCGTCGGAGTACCTCCACACCGGGGTAGGGCTGTGCAT
CCCGCCCATGTGCCTCTTGGACTACAAGGGGTTCCGGATGCTTGCGCAGG
CACACCTCCCCCTGGGCGAGACGAGCCTGAAGATGGGCACTAACGACGGG
GGCCGGACGGTCCTGAACGATTGCCCTATCCTCGACAAGCGCACCGCGAT
GGCGGCCAAGGCGCTCGGGCTGAGGGCCCACATCGGACCCAGAGACTGGG
TCGGTGTACAGGAAGAAGAGAAACGTGGGGGGCCAGATACTCCACGCGGC
GGCGGACGTGGAAGGGCACGAGGGCATCGATTCCAGGTGGAGGTGGTGGT
GCGGACGCTGAAGCTGGTGCTGAGGGAGTTCCAACGGCGCTGGATGAAGT
CGGAGCAGAGCTCTTCCGAACGGGGCATGCACTTGTTGGTGACACAGTTC
CTGAACCTTGTGACAGGCCACCACGAGCGCTCCCACCTCTTCTGGCGGGA
GAACGTCACCACAGGCGTCTGTCAAAGGTTCGGCACTGTTGCTCTCACCG
AGTCAGAGCGCGCGGGACTGTGGACAGTCTGCTCGGATCGGCCGGAAATC
CTCCTCACCATCGTCAAGGAGCTGGTGAAGGTCACCGGCGTCAGGTTTAA
GGAGAGCGTGAACCAGAAGTTGCGAAGCAGGAAGGCCAAATCTGTCGTGG
TGGGCTTCGAGTTCCACCTTGGGGACATCCGCGACATCGAGGCGGTCGTG
ACTCCCATGGCCATCTACCAGTGA
back to top
Synonyms
The feature 'Ec-28_000850.1' has the following synonyms
Synonym
Esi0098_0055
Esi_0098_0055