Ec-28_000850.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
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Overview
Homology
BLAST of Ec-28_000850.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 917 bits (2371), Expect = 0.000e+0 Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 1
Query: 1 MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIYQ 1371
MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIYQ
Sbjct: 1 MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGHRFQVEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIYQ 457
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A835YKN4_9STRA (CLU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.210e-62 Identity = 109/201 (54.23%), Postives = 136/201 (67.66%), Query Frame = 1
Query: 259 GMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGV 858
G+ RV++ D GDNWN +QEA +LP T+M+ YK L VY DF AV YGRTIISE+FLH Y++S++P+ +GG AGGKK+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELRG S Y H GV GL PMC+LDYKGFRM+ A LPLG +L G++DGG V+ + D A + R + P G
Sbjct: 19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRGHSYYAHAGVAGLHFSPMCILDYKGFRMVCAAQLPLGAATLISGSSDGGINVVG---VGDAEVARVLEEAAARLRLRPHPCRGT 216
BLAST of Ec-28_000850.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.930e-53 Identity = 104/192 (54.17%), Postives = 125/192 (65.10%), Query Frame = 1
Query: 295 NWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKP-KRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQE 864
NWN+ +Q AL LP T K + V DF AVTYG+TIISEYFL KS+KP + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL + GL CL+DYKGFRM AQA LP+ +L+ G++D GRTV ND L K+ AK L LR H WV +E
Sbjct: 10 NWNELFQSALDLPEDTPDQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTH-----WVNDKE 196
BLAST of Ec-28_000850.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 197 bits (501), Expect = 5.020e-52 Identity = 108/204 (52.94%), Postives = 137/204 (67.16%), Query Frame = 1
Query: 223 KAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 831
++W+ EL+F + G NWN+ +Q AL LP +T K L V DF TAVTYG+TIISEYFL KS++ K LGG+AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL CL+DYKGFRM AQA LP+ + SL+ G+++GG+TV N+ L K+ AAK L LR H
Sbjct: 224 RSWERFRELVFPDDMEQAYRETG-NWNELFQSALDLPEETPDQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTH 426
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A835ZAL9_9STRA (CLU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.930e-40 Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 361 KRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPL-GETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIG 837
K ++L A+ DF+ AVTYGRTIISEYFL E KSV P +GG+AGG+K+L RGILFKLADGS+GPY GSDEAA KA ++L+GA + + GL L+DYKGFRM AQA LPL +L+ G+ D G TV++ L + + A L L+AH G
Sbjct: 19 KYQALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGAVHLVKCSIPGLFCSLQALIDYKGFRMHAQAQLPLCSRATLRCGSCDAGATVVDGDGALRHKLRLVAAQLNLKAHRG 179
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A7S4DG52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG52_HETAK) HSP 1 Score: 134 bits (336), Expect = 5.780e-34 Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 289 GDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELR 609
GD+WN+R+Q A+SLP T + K L +V DF+ TA TY +T+ISEYFL E++KSVK + GG+AGG+KY WRGILFKLADG GPY GSD AAAKA GH+LR
Sbjct: 37 GDDWNERFQHAISLPESTDEEKLLKYTLLTSVNRDFIATAETYAKTVISEYFLPEHLKSVKSGQFGGIAGGRKYCWRGILFKLADGQCGPYEGSDAAAAKAMGHDLR 143
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A7R9UF47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.220e-31 Identity = 69/140 (49.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 298 WNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVG-LCIPPMCLLDYKGFRMLAQAHLPL 714
WN+R+Q L LP+ + + ++ L A Y+DFV TA TYG +ISE FL+E +K++ + + GLAGG+KY +RGI FKLA G + PYGG AA+KA GHEL+GA+ Y V L IP L+DY+G+R+LAQ LP+
Sbjct: 30 WNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGATHYSRCNVTELNIPMHVLIDYRGYRLLAQTKLPI 168
BLAST of Ec-28_000850.1 vs. uniprot
Match: L8HJ57_ACACA (Tetratricopeptide repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJ57_ACACA) HSP 1 Score: 135 bits (341), Expect = 1.710e-30 Identity = 71/166 (42.77%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 340 TKMDINYK-RRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 831
T +D Y R+L + DF++++ +YGR IISE F+ ++MK++KP +GG+ GG KY+ ILFK A S G YG SD AA+K AGHEL+G Y + G+ LC+P M L+DY+GFR+LA + LP+ ++++ G+ND G T+ + L + +AA+ L ++ H
Sbjct: 276 TPLDERYNTNRALIHLAQDFIYSSCSYGRIIISEAFVPDHMKTIKPTAMGGIVGGDKYIVNNILFKFAVDSHGLYG-SDYAASKVAGHELKGLLAYFNLGIRDLCLPLMALIDYRGFRLLAMSILPIKKSTIVYGSNDYGHTMHAENKKLGAKMRIAARKLNIKPH 440
BLAST of Ec-28_000850.1 vs. uniprot
Match: A0A2P6N2S8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2S8_9EUKA) HSP 1 Score: 135 bits (339), Expect = 3.920e-30 Identity = 72/179 (40.22%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 298 WNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPK-RLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 831
WND +Q+ L+LP T+ + +K L ++ DFVH A T+G+ IISE +LH +++ P +GG+AGG+KY++ GILFK A + YGG D A KAA HEL+ + Y G+ +P M L++Y+G+R++A + +P+ +L G+ DGG TVL ++ MA K L L+ H
Sbjct: 171 WNDEFQKILALPENTEDEKLHKYSELSSLNKDFVHIAKTFGKIIISERYLHAKHRTINPTTEVGGVAGGEKYVYHGILFKFAIDWRNLYGG-DHNAMKAANHELQAVTRYYECE-GISVPLMTLIEYRGYRLVAMSWVPITSRTLVYGSQDGGYTVLASDEKCNRLMQMAGKRLNLKGH 347
BLAST of Ec-28_000850.1 vs. uniprot
Match: F0ZU77_DICPU (Clu domain-containing protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZU77_DICPU) HSP 1 Score: 132 bits (332), Expect = 2.780e-29 Identity = 76/182 (41.76%), Postives = 111/182 (60.99%), Query Frame = 1
Query: 298 WNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQ--GPYGGSDEAAAKAAGHELRGASEYLHTGV-GLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHI 834
WN +Q L + D K L ++ DFV+ A TYGR IISE FL +K++KP +GG+AGG+KY+ +GILFK A ++ G YG SDE A K A HEL G + +L+ G+ GL +P M +DY+GFR++A + LP+ + SL G+ D G+TV I + A+K + L++H+
Sbjct: 257 WNSEFQRLLEMD-----DCLEKFERLSSLEHDFVYAAETYGRIIISENFLSNELKTIKPVSVGGIAGGEKYIVQGILFKFALENETFGLYG-SDENAMKTAAHELNGCTSFLNCGIKGLHVPLMAYIDYRGFRLMAMSLLPISKKSLIYGSCDAGQTVHTSNNIFNHLFGNASKIVNLKSHM 432 The following BLAST results are available for this feature:
BLAST of Ec-28_000850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=458bpback to top spliced messenger RNA >Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1374bp|location=Sequence derived from alignment at chr_28:816857..825878- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGAACCTGGATGGGAAGGAAGTGAACGTCGACCATGCAGCGGCGGTGGCback to top protein sequence of Ec-28_000850.1 >Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=458bp MNLDGKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGback to top mRNA from alignment at chr_28:816857..825878- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9022bp|location=Sequence derived from alignment at chr_28:816857..825878- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_28:816857..825878- >Ec-28_000850.1 ID=Ec-28_000850.1|Name=Ec-28_000850.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1374bp|location=Sequence derived from alignment at chr_28:816857..825878- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-28_000850.1' has the following synonyms
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